RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
NECAP1-218ENST00000639595 GPATCH8Q9UKJ3 1502 aaKnown RBP12.3□□□□□ -0.44
NECAP1-218ENST00000639595 DNMT1P26358 1616 aaKnown RBP12.3□□□□□ -0.44
NECAP1-218ENST00000639595 ABCA8O94911 1581 aa12.3□□□□□ -0.44
NECAP1-218ENST00000639595 MPHOSPH9Q99550 1183 aa12.29□□□□□ -0.44
NECAP1-218ENST00000639595 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-218ENST00000639595 KDM6BO15054 1643 aa12.28□□□□□ -0.44
NECAP1-218ENST00000639595 ADCY10Q96PN6 1610 aa12.28□□□□□ -0.44
NECAP1-218ENST00000639595 KDM5BQ9UGL1 1544 aa12.28□□□□□ -0.44
NECAP1-218ENST00000639595 TRIM52Q96A61 297 aa12.27□□□□□ -0.44
NECAP1-218ENST00000639595 ATP10BO94823 1461 aa12.27□□□□□ -0.45
NECAP1-218ENST00000639595 PLEKHD1A6NEE1 506 aa12.27□□□□□ -0.45
NECAP1-218ENST00000639595 CAMSAP2Q08AD1 1489 aa12.25□□□□□ -0.45
NECAP1-218ENST00000639595 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
NECAP1-218ENST00000639595 PTPRGP23470 1445 aa12.24□□□□□ -0.45
NECAP1-218ENST00000639595 ADGRL2O95490 1459 aa12.24□□□□□ -0.45
NECAP1-218ENST00000639595 ABCC10Q5T3U5 1492 aa12.24□□□□□ -0.45
NECAP1-218ENST00000639595 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
NECAP1-218ENST00000639595 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
NECAP1-218ENST00000639595 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
NECAP1-218ENST00000639595 KIF14Q15058 1648 aa12.23□□□□□ -0.45
NECAP1-218ENST00000639595 ANKRD30AQ9BXX3 1397 aa12.19□□□□□ -0.46
NECAP1-218ENST00000639595 RPRD2Q5VT52 1461 aaKnown RBP12.19□□□□□ -0.46
NECAP1-218ENST00000639595 L3MBTL2Q969R5 705 aa12.18□□□□□ -0.46
NECAP1-218ENST00000639595 HIRIP3Q9BW71 556 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-218ENST00000639595 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
NECAP1-218ENST00000639595 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-218ENST00000639595 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
NECAP1-218ENST00000639595 SHROOM2Q13796 1616 aa12.18□□□□□ -0.46
NECAP1-218ENST00000639595 PZPP20742 1482 aa12.17□□□□□ -0.46
NECAP1-218ENST00000639595 FOXD1Q16676 465 aa12.17□□□□□ -0.46
NECAP1-218ENST00000639595 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
NECAP1-218ENST00000639595 ADGBQ8N7X0 1667 aa12.15□□□□□ -0.46
NECAP1-218ENST00000639595 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
NECAP1-218ENST00000639595 CDC42BPAQ5VT25 1732 aa12.15□□□□□ -0.46
NECAP1-218ENST00000639595 CROCC2H7BZ55 1655 aa12.15□□□□□ -0.46
NECAP1-218ENST00000639595 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.47
NECAP1-218ENST00000639595 ANKRD50Q9ULJ7 1429 aa12.14□□□□□ -0.47
NECAP1-218ENST00000639595 CHD1O14646 1710 aa12.14□□□□□ -0.47
NECAP1-218ENST00000639595 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
NECAP1-218ENST00000639595 TEX14Q8IWB6 1497 aa12.13□□□□□ -0.47
NECAP1-218ENST00000639595 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
NECAP1-218ENST00000639595 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
NECAP1-218ENST00000639595 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
NECAP1-218ENST00000639595 TSPY4P0CV99 314 aa12.13□□□□□ -0.47
NECAP1-218ENST00000639595 TSPY10P0CW01 314 aa12.13□□□□□ -0.47
NECAP1-218ENST00000639595 KIAA1107Q9UPP5 1409 aa12.13□□□□□ -0.47
NECAP1-218ENST00000639595 HSPA5P11021 654 aaKnown RBP12.12□□□□□ -0.47
NECAP1-218ENST00000639595 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
NECAP1-218ENST00000639595 ARHGEF5Q12774 1597 aa12.12□□□□□ -0.47
NECAP1-218ENST00000639595 ANP32CO43423 234 aa12.12□□□□□ -0.47
NECAP1-218ENST00000639595 NBPF8Q3BBV2 869 aa12.1□□□□□ -0.47
NECAP1-218ENST00000639595 WASHC2AQ641Q2 1341 aa12.09□□□□□ -0.47
NECAP1-218ENST00000639595 ABCC2Q92887 1545 aa12.09□□□□□ -0.47
NECAP1-218ENST00000639595 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
NECAP1-218ENST00000639595 PKD2Q13563 968 aa12.09□□□□□ -0.47
NECAP1-218ENST00000639595 KDM5DQ9BY66 1539 aa12.08□□□□□ -0.48
NECAP1-218ENST00000639595 SPATA31E1Q6ZUB1 1445 aa12.07□□□□□ -0.48
NECAP1-218ENST00000639595 NUP155O75694 1391 aa12.07□□□□□ -0.48
NECAP1-218ENST00000639595 KIF15Q9NS87 1388 aa12.07□□□□□ -0.48
NECAP1-218ENST00000639595 CCDC141Q6ZP82 1450 aa12.07□□□□□ -0.48
NECAP1-218ENST00000639595 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
NECAP1-218ENST00000639595 PREX2Q70Z35 1606 aa12.07□□□□□ -0.48
NECAP1-218ENST00000639595 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
NECAP1-218ENST00000639595 UHRF1BP1LA0JNW5 1464 aa12.06□□□□□ -0.48
NECAP1-218ENST00000639595 SAMD9LQ8IVG5 1584 aa12.06□□□□□ -0.48
NECAP1-218ENST00000639595 CDC42BPBQ9Y5S2 1711 aa12.05□□□□□ -0.48
NECAP1-218ENST00000639595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.48
NECAP1-218ENST00000639595 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
NECAP1-218ENST00000639595 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-218ENST00000639595 CCDC7Q96M83 1385 aa12.02□□□□□ -0.48
NECAP1-218ENST00000639595 MAST1Q9Y2H9 1570 aa12.02□□□□□ -0.49
NECAP1-218ENST00000639595 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.49
NECAP1-218ENST00000639595 TTC37Q6PGP7 1564 aa12.02□□□□□ -0.49
NECAP1-218ENST00000639595 PLCH2O75038 1416 aa12.01□□□□□ -0.49
NECAP1-218ENST00000639595 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
NECAP1-218ENST00000639595 CNTLNQ9NXG0 1405 aa12□□□□□ -0.49
NECAP1-218ENST00000639595 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
NECAP1-218ENST00000639595 ARHGEF12Q9NZN5 1544 aa11.99□□□□□ -0.49
NECAP1-218ENST00000639595 EFCAB2Q5VUJ9 269 aa11.98□□□□□ -0.49
NECAP1-218ENST00000639595 KIF7Q2M1P5 1343 aa11.97□□□□□ -0.49
NECAP1-218ENST00000639595 FAM135AQ9P2D6 1515 aa11.97□□□□□ -0.49
NECAP1-218ENST00000639595 SUPT16HQ9Y5B9 1047 aaKnown RBP11.97□□□□□ -0.49
NECAP1-218ENST00000639595 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
NECAP1-218ENST00000639595 ZCCHC11Q5TAX3 1644 aaKnown RBP11.96□□□□□ -0.5
NECAP1-218ENST00000639595 PLXNC1O60486 1568 aa11.96□□□□□ -0.5
NECAP1-218ENST00000639595 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
NECAP1-218ENST00000639595 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
NECAP1-218ENST00000639595 USP47Q96K76 1375 aa11.95□□□□□ -0.5
NECAP1-218ENST00000639595 UNC13BO14795 1591 aa11.94□□□□□ -0.5
NECAP1-218ENST00000639595 ARAP3Q8WWN8 1544 aa11.94□□□□□ -0.5
NECAP1-218ENST00000639595 PRKRIP1Q9H875 184 aaPredicted RBP11.94□□□□□ -0.5
NECAP1-218ENST00000639595 DUOX2Q9NRD8 1548 aa11.93□□□□□ -0.5
NECAP1-218ENST00000639595 ERBINQ96RT1 1412 aa11.93□□□□□ -0.5
NECAP1-218ENST00000639595 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
NECAP1-218ENST00000639595 ATP10AO60312 1499 aa11.92□□□□□ -0.5
NECAP1-218ENST00000639595 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
NECAP1-218ENST00000639595 ABCC1P33527 1531 aa11.91□□□□□ -0.5
NECAP1-218ENST00000639595 RTEL1-TNFRSF6BF6WH68 1400 aa11.91□□□□□ -0.5
NECAP1-218ENST00000639595 KDM5CP41229 1560 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms