RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
PAX6-238ENST00000638755 MAGI2Q86UL8 1455 aa20.17■□□□□ 0.82
PAX6-238ENST00000638755 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
PAX6-238ENST00000638755 ARHGEF12Q9NZN5 1544 aa20.15■□□□□ 0.82
PAX6-238ENST00000638755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.14■□□□□ 0.81
PAX6-238ENST00000638755 SAMD9Q5K651 1589 aa20.13■□□□□ 0.81
PAX6-238ENST00000638755 UHRF1BP1Q6BDS2 1440 aa20.13■□□□□ 0.81
PAX6-238ENST00000638755 RANGAP1P46060 587 aaPredicted RBP20.13■□□□□ 0.81
PAX6-238ENST00000638755 ATP10AO60312 1499 aa20.11■□□□□ 0.81
PAX6-238ENST00000638755 SCAPERQ9BY12 1400 aa20.1■□□□□ 0.81
PAX6-238ENST00000638755 PTPRTO14522 1441 aa20.09■□□□□ 0.81
PAX6-238ENST00000638755 C9orf84Q5VXU9 1444 aa20.09■□□□□ 0.81
PAX6-238ENST00000638755 LTBP4Q8N2S1 1624 aa20.06■□□□□ 0.8
PAX6-238ENST00000638755 SETD1BQ9UPS6 1966 aaKnown RBP20.05■□□□□ 0.8
PAX6-238ENST00000638755 IQSEC2Q5JU85 1478 aa20.02■□□□□ 0.8
PAX6-238ENST00000638755 PLCH2O75038 1416 aa20.01■□□□□ 0.79
PAX6-238ENST00000638755 MYT1LQ9UL68 1186 aa20■□□□□ 0.79
PAX6-238ENST00000638755 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
PAX6-238ENST00000638755 EFCAB2Q5VUJ9 269 aa19.96■□□□□ 0.79
PAX6-238ENST00000638755 ESF1Q9H501 851 aaKnown RBP19.96■□□□□ 0.79
PAX6-238ENST00000638755 C3P01024 1663 aa19.95■□□□□ 0.78
PAX6-238ENST00000638755 CDK13Q14004 1512 aaKnown RBP19.94■□□□□ 0.78
PAX6-238ENST00000638755 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
PAX6-238ENST00000638755 NCOA1Q15788 1441 aa19.93■□□□□ 0.78
PAX6-238ENST00000638755 TRAPPC8Q9Y2L5 1435 aa19.93■□□□□ 0.78
PAX6-238ENST00000638755 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
PAX6-238ENST00000638755 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
PAX6-238ENST00000638755 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
PAX6-238ENST00000638755 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
PAX6-238ENST00000638755 NCKAP5LQ9HCH0 1330 aa19.88■□□□□ 0.77
PAX6-238ENST00000638755 DIP2CQ9Y2E4 1556 aa19.87■□□□□ 0.77
PAX6-238ENST00000638755 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
PAX6-238ENST00000638755 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
PAX6-238ENST00000638755 KDM5CP41229 1560 aa19.86■□□□□ 0.77
PAX6-238ENST00000638755 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
PAX6-238ENST00000638755 ARHGAP5Q13017 1502 aa19.83■□□□□ 0.77
PAX6-238ENST00000638755 ABCA6Q8N139 1617 aa19.83■□□□□ 0.76
PAX6-238ENST00000638755 MED1Q15648 1581 aaPredicted RBP19.82■□□□□ 0.76
PAX6-238ENST00000638755 REREQ9P2R6 1566 aa19.82■□□□□ 0.76
PAX6-238ENST00000638755 HSPA1LP34931 641 aa19.81■□□□□ 0.76
PAX6-238ENST00000638755 CNTLNQ9NXG0 1405 aa19.79■□□□□ 0.76
PAX6-238ENST00000638755 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
PAX6-238ENST00000638755 AGLP35573 1532 aa19.79■□□□□ 0.76
PAX6-238ENST00000638755 KIF14Q15058 1648 aa19.79■□□□□ 0.76
PAX6-238ENST00000638755 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
PAX6-238ENST00000638755 MLH3Q9UHC1 1453 aa19.78■□□□□ 0.76
PAX6-238ENST00000638755 NPATQ14207 1427 aa19.76■□□□□ 0.75
PAX6-238ENST00000638755 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
PAX6-238ENST00000638755 PKD2Q13563 968 aa19.74■□□□□ 0.75
PAX6-238ENST00000638755 ZMYM3Q14202 1370 aa19.72■□□□□ 0.75
PAX6-238ENST00000638755 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
PAX6-238ENST00000638755 TROQ12816 1431 aaPredicted RBP19.7■□□□□ 0.74
PAX6-238ENST00000638755 CLIP1P30622 1438 aa19.69■□□□□ 0.74
PAX6-238ENST00000638755 PLA2R1Q13018 1463 aa19.69■□□□□ 0.74
PAX6-238ENST00000638755 TOM1O60784 492 aa19.69■□□□□ 0.74
PAX6-238ENST00000638755 MROH2AA6NES4 1674 aa19.68■□□□□ 0.74
PAX6-238ENST00000638755 SUPT6HQ7KZ85 1726 aaKnown RBP19.68■□□□□ 0.74
PAX6-238ENST00000638755 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
PAX6-238ENST00000638755 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
PAX6-238ENST00000638755 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
PAX6-238ENST00000638755 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
PAX6-238ENST00000638755 FMN1Q68DA7 1419 aa19.66■□□□□ 0.74
PAX6-238ENST00000638755 ABCC1P33527 1531 aa19.66■□□□□ 0.74
PAX6-238ENST00000638755 CEP170BQ9Y4F5 1589 aaPredicted RBP19.65■□□□□ 0.74
PAX6-238ENST00000638755 ZNF142P52746 1687 aaPredicted RBP19.65■□□□□ 0.74
PAX6-238ENST00000638755 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
PAX6-238ENST00000638755 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
PAX6-238ENST00000638755 EEA1Q15075 1411 aa19.62■□□□□ 0.73
PAX6-238ENST00000638755 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
PAX6-238ENST00000638755 CLTCQ00610 1675 aaKnown RBP19.62■□□□□ 0.73
PAX6-238ENST00000638755 PTPRKQ15262 1439 aa19.6■□□□□ 0.73
PAX6-238ENST00000638755 PREX2Q70Z35 1606 aa19.6■□□□□ 0.73
PAX6-238ENST00000638755 GGT6Q6P531 493 aa19.58■□□□□ 0.72
PAX6-238ENST00000638755 ZNF777Q9ULD5 760 aaPredicted RBP19.58■□□□□ 0.72
PAX6-238ENST00000638755 CPS1P31327 1500 aa19.57■□□□□ 0.72
PAX6-238ENST00000638755 SAMD9LQ8IVG5 1584 aa19.57■□□□□ 0.72
PAX6-238ENST00000638755 SPAG9O60271 1321 aaKnown RBP19.56■□□□□ 0.72
PAX6-238ENST00000638755 SHANK2Q9UPX8 1470 aa19.55■□□□□ 0.72
PAX6-238ENST00000638755 LRRIQ1Q96JM4 1722 aa19.55■□□□□ 0.72
PAX6-238ENST00000638755 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
PAX6-238ENST00000638755 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
PAX6-238ENST00000638755 A2ML1A8K2U0 1454 aa19.53■□□□□ 0.72
PAX6-238ENST00000638755 DNMT1P26358 1616 aaKnown RBP19.52■□□□□ 0.72
PAX6-238ENST00000638755 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.72
PAX6-238ENST00000638755 SYCP2Q9BX26 1530 aa19.5■□□□□ 0.71
PAX6-238ENST00000638755 A2MP01023 1474 aa19.49■□□□□ 0.71
PAX6-238ENST00000638755 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
PAX6-238ENST00000638755 NEURL4Q96JN8 1562 aa19.49■□□□□ 0.71
PAX6-238ENST00000638755 POLR1AO95602 1720 aaPredicted RBP19.48■□□□□ 0.71
PAX6-238ENST00000638755 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
PAX6-238ENST00000638755 ATP7AQ04656 1500 aa19.48■□□□□ 0.71
PAX6-238ENST00000638755 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
PAX6-238ENST00000638755 PLXNC1O60486 1568 aa19.47■□□□□ 0.71
PAX6-238ENST00000638755 ANKLE2Q86XL3 938 aa19.45■□□□□ 0.7
PAX6-238ENST00000638755 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
PAX6-238ENST00000638755 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
PAX6-238ENST00000638755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
PAX6-238ENST00000638755 TNRQ92752 1358 aa19.42■□□□□ 0.7
PAX6-238ENST00000638755 INO80Q9ULG1 1556 aaPredicted RBP19.41■□□□□ 0.7
PAX6-238ENST00000638755 CCDC18Q5T9S5 1454 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms