RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
SCARB2-209ENST00000638409 MYT1Q01538 1121 aa12.1□□□□□ -0.47
SCARB2-209ENST00000638409 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.48
SCARB2-209ENST00000638409 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
SCARB2-209ENST00000638409 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
SCARB2-209ENST00000638409 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-209ENST00000638409 ERICH3Q5RHP9 1530 aa12.04□□□□□ -0.48
SCARB2-209ENST00000638409 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-209ENST00000638409 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
SCARB2-209ENST00000638409 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
SCARB2-209ENST00000638409 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
SCARB2-209ENST00000638409 KDM4CQ9H3R0 1056 aa12.03□□□□□ -0.48
SCARB2-209ENST00000638409 RGS22Q8NE09 1264 aa12.01□□□□□ -0.49
SCARB2-209ENST00000638409 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
SCARB2-209ENST00000638409 FOXD4L5Q5VV16 416 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-209ENST00000638409 AEBP1Q8IUX7 1158 aa12.01□□□□□ -0.49
SCARB2-209ENST00000638409 FOXD4L4Q8WXT5 416 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-209ENST00000638409 TESPA1A2RU30 521 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-209ENST00000638409 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
SCARB2-209ENST00000638409 ADAMTS12P58397 1594 aa11.97□□□□□ -0.49
SCARB2-209ENST00000638409 IGF1RP08069 1367 aa11.97□□□□□ -0.49
SCARB2-209ENST00000638409 CHD1O14646 1710 aa11.96□□□□□ -0.49
SCARB2-209ENST00000638409 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.49
SCARB2-209ENST00000638409 RBM25P49756 843 aaKnown RBP11.96□□□□□ -0.5
SCARB2-209ENST00000638409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-209ENST00000638409 CUL7Q14999 1698 aa11.95□□□□□ -0.5
SCARB2-209ENST00000638409 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
SCARB2-209ENST00000638409 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-209ENST00000638409 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
SCARB2-209ENST00000638409 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-209ENST00000638409 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
SCARB2-209ENST00000638409 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-209ENST00000638409 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
SCARB2-209ENST00000638409 ARHGEF1Q92888 912 aaKnown RBP11.93□□□□□ -0.5
SCARB2-209ENST00000638409 CHMP7Q8WUX9 453 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-209ENST00000638409 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-209ENST00000638409 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-209ENST00000638409 EEA1Q15075 1411 aa11.92□□□□□ -0.5
SCARB2-209ENST00000638409 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
SCARB2-209ENST00000638409 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
SCARB2-209ENST00000638409 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
SCARB2-209ENST00000638409 AK7Q96M32 723 aa11.9□□□□□ -0.51
SCARB2-209ENST00000638409 CARMIL1Q5VZK9 1371 aa11.89□□□□□ -0.51
SCARB2-209ENST00000638409 GSE1Q14687 1217 aa11.89□□□□□ -0.51
SCARB2-209ENST00000638409 NUP160Q12769 1436 aa11.88□□□□□ -0.51
SCARB2-209ENST00000638409 CLASP1Q7Z460 1538 aa11.87□□□□□ -0.51
SCARB2-209ENST00000638409 CDK11BP21127 795 aaKnown RBP11.86□□□□□ -0.51
SCARB2-209ENST00000638409 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-209ENST00000638409 PRXQ9BXM0 1461 aa11.86□□□□□ -0.51
SCARB2-209ENST00000638409 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
SCARB2-209ENST00000638409 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
SCARB2-209ENST00000638409 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
SCARB2-209ENST00000638409 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
SCARB2-209ENST00000638409 TMCO4Q5TGY1 634 aa11.85□□□□□ -0.51
SCARB2-209ENST00000638409 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
SCARB2-209ENST00000638409 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
SCARB2-209ENST00000638409 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-209ENST00000638409 TRAK2O60296 914 aa11.83□□□□□ -0.52
SCARB2-209ENST00000638409 PDE4DQ08499 809 aa11.83□□□□□ -0.52
SCARB2-209ENST00000638409 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-209ENST00000638409 NUBP1P53384 320 aa11.83□□□□□ -0.52
SCARB2-209ENST00000638409 E2F4Q16254 413 aa11.83□□□□□ -0.52
SCARB2-209ENST00000638409 KRI1Q8N9T8 703 aaKnown RBP11.82□□□□□ -0.52
SCARB2-209ENST00000638409 TRIM66O15016 1216 aa11.8□□□□□ -0.52
SCARB2-209ENST00000638409 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-209ENST00000638409 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
SCARB2-209ENST00000638409 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
SCARB2-209ENST00000638409 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
SCARB2-209ENST00000638409 KIF21BO75037 1637 aa11.78□□□□□ -0.52
SCARB2-209ENST00000638409 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
SCARB2-209ENST00000638409 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
SCARB2-209ENST00000638409 FLIIQ13045 1269 aa11.77□□□□□ -0.53
SCARB2-209ENST00000638409 HSP90B1P14625 803 aaKnown RBP11.76□□□□□ -0.53
SCARB2-209ENST00000638409 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
SCARB2-209ENST00000638409 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
SCARB2-209ENST00000638409 RETREG2Q8NC44 543 aa11.75□□□□□ -0.53
SCARB2-209ENST00000638409 ARHGEF11O15085 1522 aa11.74□□□□□ -0.53
SCARB2-209ENST00000638409 RIMBP3CA6NJZ7 1639 aa11.74□□□□□ -0.53
SCARB2-209ENST00000638409 RIMBP3BA6NNM3 1639 aa11.74□□□□□ -0.53
SCARB2-209ENST00000638409 RIMBP3Q9UFD9 1639 aa11.74□□□□□ -0.53
SCARB2-209ENST00000638409 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
SCARB2-209ENST00000638409 IRF5Q13568 498 aa11.73□□□□□ -0.53
SCARB2-209ENST00000638409 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-209ENST00000638409 IQGAP2Q13576 1575 aa11.73□□□□□ -0.53
SCARB2-209ENST00000638409 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
SCARB2-209ENST00000638409 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
SCARB2-209ENST00000638409 A6NJR5 290 aa11.71□□□□□ -0.54
SCARB2-209ENST00000638409 ABCB7O75027 752 aa11.71□□□□□ -0.54
SCARB2-209ENST00000638409 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
SCARB2-209ENST00000638409 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
SCARB2-209ENST00000638409 GOLGA3Q08378 1498 aa11.69□□□□□ -0.54
SCARB2-209ENST00000638409 PRG4Q92954 1404 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-209ENST00000638409 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
SCARB2-209ENST00000638409 ERCC6L2Q5T890 1561 aa11.67□□□□□ -0.54
SCARB2-209ENST00000638409 HMGB1P09429 215 aaKnown RBP11.67□□□□□ -0.54
SCARB2-209ENST00000638409 PUS7Q96PZ0 661 aaKnown RBP11.67□□□□□ -0.54
SCARB2-209ENST00000638409 USP35Q9P2H5 1018 aa11.66□□□□□ -0.54
SCARB2-209ENST00000638409 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
SCARB2-209ENST00000638409 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
SCARB2-209ENST00000638409 E9PSI1 815 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms