RNA–Protein interactions for RNA: ENST00000637806.1

SMARCA2-263, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 7,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-263ENST00000637806 SALL2Q9Y467 1007 aaPredicted RBP12.81□□□□□ -0.36
SMARCA2-263ENST00000637806 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
SMARCA2-263ENST00000637806 FHAD1B1AJZ9 1412 aa12.8□□□□□ -0.36
SMARCA2-263ENST00000637806 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
SMARCA2-263ENST00000637806 NGLY1Q96IV0 654 aa12.79□□□□□ -0.36
SMARCA2-263ENST00000637806 DCAF11Q8TEB1 546 aa12.78□□□□□ -0.36
SMARCA2-263ENST00000637806 AFAP1Q8N556 730 aa12.77□□□□□ -0.36
SMARCA2-263ENST00000637806 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
SMARCA2-263ENST00000637806 STRN4Q9NRL3 753 aa12.77□□□□□ -0.37
SMARCA2-263ENST00000637806 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
SMARCA2-263ENST00000637806 EEA1Q15075 1411 aa12.76□□□□□ -0.37
SMARCA2-263ENST00000637806 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
SMARCA2-263ENST00000637806 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
SMARCA2-263ENST00000637806 EIF4G2P78344 907 aaKnown RBP eCLIP12.74□□□□□ -0.372e-9■■■■□ 23.9
SMARCA2-263ENST00000637806 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
SMARCA2-263ENST00000637806 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMARCA2-263ENST00000637806 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
SMARCA2-263ENST00000637806 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
SMARCA2-263ENST00000637806 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
SMARCA2-263ENST00000637806 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMARCA2-263ENST00000637806 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
SMARCA2-263ENST00000637806 AMPHP49418 695 aa12.72□□□□□ -0.37
SMARCA2-263ENST00000637806 FMN1Q68DA7 1419 aa12.71□□□□□ -0.37
SMARCA2-263ENST00000637806 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
SMARCA2-263ENST00000637806 CARD11Q9BXL7 1154 aa12.71□□□□□ -0.37
SMARCA2-263ENST00000637806 ANP32CO43423 234 aa12.71□□□□□ -0.37
SMARCA2-263ENST00000637806 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.38
SMARCA2-263ENST00000637806 CDCA8Q53HL2 280 aa12.71□□□□□ -0.38
SMARCA2-263ENST00000637806 SLC26A8Q96RN1 970 aa12.7□□□□□ -0.38
SMARCA2-263ENST00000637806 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
SMARCA2-263ENST00000637806 DISP3Q9P2K9 1392 aa12.7□□□□□ -0.38
SMARCA2-263ENST00000637806 NUP155O75694 1391 aa12.69□□□□□ -0.38
SMARCA2-263ENST00000637806 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
SMARCA2-263ENST00000637806 PKD2Q13563 968 aa12.68□□□□□ -0.38
SMARCA2-263ENST00000637806 RBM33Q96EV2 1170 aaKnown RBP12.68□□□□□ -0.38
SMARCA2-263ENST00000637806 NUTM2GQ5VZR2 741 aa12.68□□□□□ -0.38
SMARCA2-263ENST00000637806 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
SMARCA2-263ENST00000637806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCA2-263ENST00000637806 KNSTRNQ9Y448 316 aa12.67□□□□□ -0.38
SMARCA2-263ENST00000637806 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
SMARCA2-263ENST00000637806 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
SMARCA2-263ENST00000637806 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
SMARCA2-263ENST00000637806 CCDC18Q5T9S5 1454 aa12.66□□□□□ -0.38
SMARCA2-263ENST00000637806 TRAK1Q9UPV9 953 aa12.66□□□□□ -0.38
SMARCA2-263ENST00000637806 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
SMARCA2-263ENST00000637806 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
SMARCA2-263ENST00000637806 TOPBP1Q92547 1522 aa12.65□□□□□ -0.38
SMARCA2-263ENST00000637806 HIRIP3Q9BW71 556 aaPredicted RBP12.65□□□□□ -0.38
SMARCA2-263ENST00000637806 TULP1O00294 542 aaPredicted RBP12.64□□□□□ -0.39
SMARCA2-263ENST00000637806 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
SMARCA2-263ENST00000637806 GTF3C3Q9Y5Q9 886 aa12.64□□□□□ -0.39
SMARCA2-263ENST00000637806 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
SMARCA2-263ENST00000637806 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
SMARCA2-263ENST00000637806 ARHGAP5Q13017 1502 aa12.64□□□□□ -0.39
SMARCA2-263ENST00000637806 BICRAQ9NZM4 1560 aa12.63□□□□□ -0.39
SMARCA2-263ENST00000637806 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
SMARCA2-263ENST00000637806 XPCQ01831 940 aaPredicted RBP12.62□□□□□ -0.39
SMARCA2-263ENST00000637806 NUDCQ9Y266 331 aa12.62□□□□□ -0.39
SMARCA2-263ENST00000637806 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
SMARCA2-263ENST00000637806 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
SMARCA2-263ENST00000637806 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
SMARCA2-263ENST00000637806 SCAPERQ9BY12 1400 aa12.61□□□□□ -0.39
SMARCA2-263ENST00000637806 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
SMARCA2-263ENST00000637806 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
SMARCA2-263ENST00000637806 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
SMARCA2-263ENST00000637806 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
SMARCA2-263ENST00000637806 CFTRP13569 1480 aa12.58□□□□□ -0.4
SMARCA2-263ENST00000637806 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
SMARCA2-263ENST00000637806 CEP162Q5TB80 1403 aa12.57□□□□□ -0.4
SMARCA2-263ENST00000637806 ACIN1Q9UKV3 1341 aaKnown RBP12.56□□□□□ -0.4
SMARCA2-263ENST00000637806 POLA1P09884 1462 aaPredicted RBP12.56□□□□□ -0.4
SMARCA2-263ENST00000637806 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
SMARCA2-263ENST00000637806 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
SMARCA2-263ENST00000637806 GPRASP1Q5JY77 1395 aa12.55□□□□□ -0.4
SMARCA2-263ENST00000637806 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
SMARCA2-263ENST00000637806 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
SMARCA2-263ENST00000637806 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
SMARCA2-263ENST00000637806 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
SMARCA2-263ENST00000637806 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
SMARCA2-263ENST00000637806 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.4
SMARCA2-263ENST00000637806 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.4
SMARCA2-263ENST00000637806 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
SMARCA2-263ENST00000637806 UACAQ9BZF9 1416 aa12.52□□□□□ -0.41
SMARCA2-263ENST00000637806 C1orf141Q5JVX7 400 aa12.52□□□□□ -0.41
SMARCA2-263ENST00000637806 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
SMARCA2-263ENST00000637806 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.41
SMARCA2-263ENST00000637806 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
SMARCA2-263ENST00000637806 TEX14Q8IWB6 1497 aa12.51□□□□□ -0.41
SMARCA2-263ENST00000637806 TMF1P82094 1093 aa12.51□□□□□ -0.41
SMARCA2-263ENST00000637806 HRCP23327 699 aa12.51□□□□□ -0.41
SMARCA2-263ENST00000637806 IGF1RP08069 1367 aa12.5□□□□□ -0.41
SMARCA2-263ENST00000637806 FRAT2O75474 233 aaPredicted RBP12.5□□□□□ -0.41
SMARCA2-263ENST00000637806 AKNAQ7Z591 1439 aa12.5□□□□□ -0.41
SMARCA2-263ENST00000637806 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
SMARCA2-263ENST00000637806 FAM9BQ8IZU0 186 aa12.5□□□□□ -0.41
SMARCA2-263ENST00000637806 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
SMARCA2-263ENST00000637806 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
SMARCA2-263ENST00000637806 DDX54Q8TDD1 881 aaKnown RBP12.49□□□□□ -0.41
SMARCA2-263ENST00000637806 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
SMARCA2-263ENST00000637806 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms