RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 ILDR2Q71H61 639 aa13.81□□□□□ -0.2
SMARCA2-260ENST00000637352 EFCAB5A4FU69 1503 aa13.8□□□□□ -0.2
SMARCA2-260ENST00000637352 DISP3Q9P2K9 1392 aa13.8□□□□□ -0.2
SMARCA2-260ENST00000637352 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
SMARCA2-260ENST00000637352 ZMYM4Q5VZL5 1548 aa13.79□□□□□ -0.2
SMARCA2-260ENST00000637352 PLCH2O75038 1416 aa13.78□□□□□ -0.2
SMARCA2-260ENST00000637352 FER1L4A9Z1Z3 1794 aa13.77□□□□□ -0.21
SMARCA2-260ENST00000637352 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.21
SMARCA2-260ENST00000637352 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.21
SMARCA2-260ENST00000637352 AFAP1Q8N556 730 aa13.77□□□□□ -0.21
SMARCA2-260ENST00000637352 ATP10AO60312 1499 aa13.76□□□□□ -0.21
SMARCA2-260ENST00000637352 C9orf84Q5VXU9 1444 aa13.75□□□□□ -0.21
SMARCA2-260ENST00000637352 UBTFP17480 764 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-260ENST00000637352 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
SMARCA2-260ENST00000637352 EEA1Q15075 1411 aa13.72□□□□□ -0.21
SMARCA2-260ENST00000637352 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
SMARCA2-260ENST00000637352 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
SMARCA2-260ENST00000637352 KIF14Q15058 1648 aa13.69□□□□□ -0.22
SMARCA2-260ENST00000637352 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-260ENST00000637352 ARHGAP5Q13017 1502 aa13.69□□□□□ -0.22
SMARCA2-260ENST00000637352 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
SMARCA2-260ENST00000637352 SOCS7O14512 581 aa13.68□□□□□ -0.22
SMARCA2-260ENST00000637352 ESF1Q9H501 851 aaKnown RBP13.68□□□□□ -0.22
SMARCA2-260ENST00000637352 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
SMARCA2-260ENST00000637352 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
SMARCA2-260ENST00000637352 MYO5CQ9NQX4 1742 aa13.65□□□□□ -0.22
SMARCA2-260ENST00000637352 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
SMARCA2-260ENST00000637352 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
SMARCA2-260ENST00000637352 FMN1Q68DA7 1419 aa13.64□□□□□ -0.23
SMARCA2-260ENST00000637352 TRAPPC8Q9Y2L5 1435 aa13.64□□□□□ -0.23
SMARCA2-260ENST00000637352 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
SMARCA2-260ENST00000637352 ZNF777Q9ULD5 760 aaPredicted RBP13.62□□□□□ -0.23
SMARCA2-260ENST00000637352 CLIP1P30622 1438 aa13.62□□□□□ -0.23
SMARCA2-260ENST00000637352 KDM5CP41229 1560 aa13.61□□□□□ -0.23
SMARCA2-260ENST00000637352 PTPRTO14522 1441 aa13.6□□□□□ -0.23
SMARCA2-260ENST00000637352 ABCA6Q8N139 1617 aa13.6□□□□□ -0.23
SMARCA2-260ENST00000637352 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
SMARCA2-260ENST00000637352 C3P01024 1663 aa13.59□□□□□ -0.23
SMARCA2-260ENST00000637352 SPATA31D1Q6ZQQ2 1576 aa13.58□□□□□ -0.23
SMARCA2-260ENST00000637352 MLH3Q9UHC1 1453 aa13.57□□□□□ -0.24
SMARCA2-260ENST00000637352 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
SMARCA2-260ENST00000637352 LTBP4Q8N2S1 1624 aa13.57□□□□□ -0.24
SMARCA2-260ENST00000637352 UBAP1LF5GYI3 381 aa13.56□□□□□ -0.24
SMARCA2-260ENST00000637352 SETD1BQ9UPS6 1966 aaKnown RBP13.56□□□□□ -0.24
SMARCA2-260ENST00000637352 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
SMARCA2-260ENST00000637352 CDC42BPBQ9Y5S2 1711 aa13.56□□□□□ -0.24
SMARCA2-260ENST00000637352 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
SMARCA2-260ENST00000637352 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMARCA2-260ENST00000637352 ABCC1P33527 1531 aa13.54□□□□□ -0.24
SMARCA2-260ENST00000637352 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
SMARCA2-260ENST00000637352 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
SMARCA2-260ENST00000637352 CAMSAP1Q5T5Y3 1602 aa13.53□□□□□ -0.24
SMARCA2-260ENST00000637352 AGLP35573 1532 aa13.53□□□□□ -0.24
SMARCA2-260ENST00000637352 GGT6Q6P531 493 aa13.52□□□□□ -0.25
SMARCA2-260ENST00000637352 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
SMARCA2-260ENST00000637352 ITSN2Q9NZM3 1697 aa13.51□□□□□ -0.25
SMARCA2-260ENST00000637352 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
SMARCA2-260ENST00000637352 CNTLNQ9NXG0 1405 aa13.51□□□□□ -0.25
SMARCA2-260ENST00000637352 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
SMARCA2-260ENST00000637352 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
SMARCA2-260ENST00000637352 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
SMARCA2-260ENST00000637352 SAMD9LQ8IVG5 1584 aa13.48□□□□□ -0.25
SMARCA2-260ENST00000637352 SYCP2Q9BX26 1530 aa13.48□□□□□ -0.25
SMARCA2-260ENST00000637352 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
SMARCA2-260ENST00000637352 SUPT6HQ7KZ85 1726 aaKnown RBP13.47□□□□□ -0.25
SMARCA2-260ENST00000637352 PIP4K2BP78356 416 aa13.47□□□□□ -0.25
SMARCA2-260ENST00000637352 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
SMARCA2-260ENST00000637352 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
SMARCA2-260ENST00000637352 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
SMARCA2-260ENST00000637352 NPATQ14207 1427 aa13.46□□□□□ -0.26
SMARCA2-260ENST00000637352 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
SMARCA2-260ENST00000637352 PKD2Q13563 968 aa13.45□□□□□ -0.26
SMARCA2-260ENST00000637352 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
SMARCA2-260ENST00000637352 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
SMARCA2-260ENST00000637352 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
SMARCA2-260ENST00000637352 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
SMARCA2-260ENST00000637352 ZNF644Q9H582 1327 aaPredicted RBP13.43□□□□□ -0.26
SMARCA2-260ENST00000637352 A2MP01023 1474 aa13.43□□□□□ -0.26
SMARCA2-260ENST00000637352 HSPA1LP34931 641 aa13.43□□□□□ -0.26
SMARCA2-260ENST00000637352 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
SMARCA2-260ENST00000637352 ATP7AQ04656 1500 aa13.42□□□□□ -0.26
SMARCA2-260ENST00000637352 FBXO31Q5XUX0 539 aaPredicted RBP13.41□□□□□ -0.26
SMARCA2-260ENST00000637352 MYO3AQ8NEV4 1616 aa13.41□□□□□ -0.26
SMARCA2-260ENST00000637352 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
SMARCA2-260ENST00000637352 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
SMARCA2-260ENST00000637352 MROH2AA6NES4 1674 aa13.4□□□□□ -0.26
SMARCA2-260ENST00000637352 TCOF1Q13428 1488 aaKnown RBP13.39□□□□□ -0.27
SMARCA2-260ENST00000637352 PLA2R1Q13018 1463 aa13.38□□□□□ -0.27
SMARCA2-260ENST00000637352 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
SMARCA2-260ENST00000637352 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
SMARCA2-260ENST00000637352 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
SMARCA2-260ENST00000637352 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
SMARCA2-260ENST00000637352 KIF3BO15066 747 aa13.36□□□□□ -0.27
SMARCA2-260ENST00000637352 INO80Q9ULG1 1556 aaPredicted RBP13.36□□□□□ -0.27
SMARCA2-260ENST00000637352 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
SMARCA2-260ENST00000637352 TOM1O60784 492 aa13.35□□□□□ -0.27
SMARCA2-260ENST00000637352 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
SMARCA2-260ENST00000637352 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
SMARCA2-260ENST00000637352 TNRQ92752 1358 aa13.33□□□□□ -0.27
SMARCA2-260ENST00000637352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms