RNA–Protein interactions for RNA: ENST00000636974.1

CACNA1A-233, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,783 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-233	ENST00000636974	HOMEZ	Q8IX15	550 aa		11.51	□□□□□ -0.57
CACNA1A-233	ENST00000636974	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.51	□□□□□ -0.57
CACNA1A-233	ENST00000636974	DISP1	Q96F81	1524 aa		11.51	□□□□□ -0.57
CACNA1A-233	ENST00000636974	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.51	□□□□□ -0.57
CACNA1A-233	ENST00000636974	ROCK1	Q13464	1354 aa		11.5	□□□□□ -0.57
CACNA1A-233	ENST00000636974	SIN3A	Q96ST3	1273 aa		11.49	□□□□□ -0.57
CACNA1A-233	ENST00000636974	SYNJ2	O15056	1496 aa		11.49	□□□□□ -0.57
CACNA1A-233	ENST00000636974	FOXD1	Q16676	465 aa		11.49	□□□□□ -0.57
CACNA1A-233	ENST00000636974	RAPGEF6	Q8TEU7	1601 aa		11.47	□□□□□ -0.57
CACNA1A-233	ENST00000636974	ERCC6	Q03468	1493 aa		11.47	□□□□□ -0.57
CACNA1A-233	ENST00000636974	CDK13	Q14004	1512 aa	Known RBP	11.47	□□□□□ -0.57
CACNA1A-233	ENST00000636974	NUP153	P49790	1475 aa	Known RBP	11.46	□□□□□ -0.57
CACNA1A-233	ENST00000636974	CARMIL2	Q6F5E8	1435 aa		11.45	□□□□□ -0.58
CACNA1A-233	ENST00000636974	NUP160	Q12769	1436 aa		11.44	□□□□□ -0.58
CACNA1A-233	ENST00000636974	DNMT1	P26358	1616 aa	Known RBP	11.44	□□□□□ -0.58
CACNA1A-233	ENST00000636974	TRO	Q12816	1431 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA1A-233	ENST00000636974	DAPK1	P53355	1430 aa		11.43	□□□□□ -0.58
CACNA1A-233	ENST00000636974	CCER2	I3L3R5	266 aa		11.42	□□□□□ -0.58
CACNA1A-233	ENST00000636974	ADCY10	Q96PN6	1610 aa		11.41	□□□□□ -0.58
CACNA1A-233	ENST00000636974	ITSN2	Q9NZM3	1697 aa		11.41	□□□□□ -0.58
CACNA1A-233	ENST00000636974	CEP170	Q5SW79	1584 aa		11.4	□□□□□ -0.58
CACNA1A-233	ENST00000636974	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1A-233	ENST00000636974	KDM5B	Q9UGL1	1544 aa		11.39	□□□□□ -0.59
CACNA1A-233	ENST00000636974	ABCC5	O15440	1437 aa		11.39	□□□□□ -0.59
CACNA1A-233	ENST00000636974	RRP7BP	Q9NSQ0	103 aa		11.38	□□□□□ -0.59
CACNA1A-233	ENST00000636974	DENND4B	O75064	1496 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNA1A-233	ENST00000636974	ANP32C	O43423	234 aa		11.37	□□□□□ -0.59
CACNA1A-233	ENST00000636974	ADGRL2	O95490	1459 aa		11.37	□□□□□ -0.59
CACNA1A-233	ENST00000636974	DDX10	Q13206	875 aa	Known RBP	11.36	□□□□□ -0.59
CACNA1A-233	ENST00000636974	MPHOSPH9	Q99550	1183 aa		11.36	□□□□□ -0.59
CACNA1A-233	ENST00000636974	RPRD2	Q5VT52	1461 aa	Known RBP	11.35	□□□□□ -0.59
CACNA1A-233	ENST00000636974	TRIM52	Q96A61	297 aa		11.35	□□□□□ -0.59
CACNA1A-233	ENST00000636974	CAMSAP2	Q08AD1	1489 aa		11.34	□□□□□ -0.59
CACNA1A-233	ENST00000636974	ERICH6	Q7L0X2	663 aa		11.34	□□□□□ -0.59
CACNA1A-233	ENST00000636974	CHIC2	Q9UKJ5	165 aa		11.34	□□□□□ -0.59
CACNA1A-233	ENST00000636974	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.34	□□□□□ -0.59
CACNA1A-233	ENST00000636974	SHANK2	Q9UPX8	1470 aa		11.34	□□□□□ -0.59
CACNA1A-233	ENST00000636974	JPH4	Q96JJ6	628 aa		11.33	□□□□□ -0.59
CACNA1A-233	ENST00000636974	ABCA8	O94911	1581 aa		11.33	□□□□□ -0.6
CACNA1A-233	ENST00000636974	PLB1	Q6P1J6	1458 aa		11.33	□□□□□ -0.6
CACNA1A-233	ENST00000636974	ANKRD30B	Q9BXX2	1392 aa		11.33	□□□□□ -0.6
CACNA1A-233	ENST00000636974	ADGB	Q8N7X0	1667 aa		11.33	□□□□□ -0.6
CACNA1A-233	ENST00000636974	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNA1A-233	ENST00000636974	KDM6B	O15054	1643 aa		11.32	□□□□□ -0.6
CACNA1A-233	ENST00000636974	NCOA1	Q15788	1441 aa		11.32	□□□□□ -0.6
CACNA1A-233	ENST00000636974	PRG4	Q92954	1404 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-233	ENST00000636974	KIF14	Q15058	1648 aa		11.32	□□□□□ -0.6
CACNA1A-233	ENST00000636974	KDM2A	Q9Y2K7	1162 aa		11.31	□□□□□ -0.6
CACNA1A-233	ENST00000636974	ANKRD30A	Q9BXX3	1397 aa		11.31	□□□□□ -0.6
CACNA1A-233	ENST00000636974	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
CACNA1A-233	ENST00000636974	CROCC2	H7BZ55	1655 aa		11.3	□□□□□ -0.6
CACNA1A-233	ENST00000636974	TEX14	Q8IWB6	1497 aa		11.29	□□□□□ -0.6
CACNA1A-233	ENST00000636974	PLEKHD1	A6NEE1	506 aa		11.29	□□□□□ -0.6
CACNA1A-233	ENST00000636974	ABCC10	Q5T3U5	1492 aa		11.28	□□□□□ -0.6
CACNA1A-233	ENST00000636974	ARID3C	A6NKF2	412 aa		11.27	□□□□□ -0.61
CACNA1A-233	ENST00000636974	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.27	□□□□□ -0.61
CACNA1A-233	ENST00000636974	ATP10B	O94823	1461 aa		11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	PZP	P20742	1482 aa		11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	L3MBTL2	Q969R5	705 aa		11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	KIAA1107	Q9UPP5	1409 aa		11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	ZNF644	Q9H582	1327 aa	Predicted RBP	11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	ARHGEF5	Q12774	1597 aa		11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	FBLN2	P98095	1184 aa		11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	RSPH4A	Q5TD94	716 aa		11.26	□□□□□ -0.61
CACNA1A-233	ENST00000636974	KDM5D	Q9BY66	1539 aa		11.25	□□□□□ -0.61
CACNA1A-233	ENST00000636974	HSPA5	P11021	654 aa	Known RBP	11.25	□□□□□ -0.61
CACNA1A-233	ENST00000636974	ANKRD50	Q9ULJ7	1429 aa		11.25	□□□□□ -0.61
CACNA1A-233	ENST00000636974	CNKSR2	Q8WXI2	1034 aa		11.23	□□□□□ -0.61
CACNA1A-233	ENST00000636974	CNTLN	Q9NXG0	1405 aa		11.23	□□□□□ -0.61
CACNA1A-233	ENST00000636974	PTPRG	P23470	1445 aa		11.23	□□□□□ -0.61
CACNA1A-233	ENST00000636974	C9orf84	Q5VXU9	1444 aa		11.23	□□□□□ -0.61
CACNA1A-233	ENST00000636974	WASHC2A	Q641Q2	1341 aa		11.23	□□□□□ -0.61
CACNA1A-233	ENST00000636974	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-233	ENST00000636974	MBD5	Q9P267	1494 aa		11.22	□□□□□ -0.61
CACNA1A-233	ENST00000636974	CDC42BPA	Q5VT25	1732 aa		11.22	□□□□□ -0.61
CACNA1A-233	ENST00000636974	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-233	ENST00000636974	SPATA31E1	Q6ZUB1	1445 aa		11.22	□□□□□ -0.61
CACNA1A-233	ENST00000636974	KCNH8	Q96L42	1107 aa		11.21	□□□□□ -0.61
CACNA1A-233	ENST00000636974	ARHGEF12	Q9NZN5	1544 aa		11.21	□□□□□ -0.62
CACNA1A-233	ENST00000636974	TSPY4	P0CV99	314 aa		11.21	□□□□□ -0.62
CACNA1A-233	ENST00000636974	TSPY10	P0CW01	314 aa		11.21	□□□□□ -0.62
CACNA1A-233	ENST00000636974	CCDC7	Q96M83	1385 aa		11.2	□□□□□ -0.62
CACNA1A-233	ENST00000636974	SHROOM2	Q13796	1616 aa		11.2	□□□□□ -0.62
CACNA1A-233	ENST00000636974	TMEM132A	Q24JP5	1023 aa		11.2	□□□□□ -0.62
CACNA1A-233	ENST00000636974	CCDC141	Q6ZP82	1450 aa		11.2	□□□□□ -0.62
CACNA1A-233	ENST00000636974	UHRF1BP1	Q6BDS2	1440 aa		11.19	□□□□□ -0.62
CACNA1A-233	ENST00000636974	POLR1A	O95602	1720 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNA1A-233	ENST00000636974	NEFL	P07196	543 aa		11.18	□□□□□ -0.62
CACNA1A-233	ENST00000636974	PLEKHH2	Q8IVE3	1493 aa		11.18	□□□□□ -0.62
CACNA1A-233	ENST00000636974	PREX2	Q70Z35	1606 aa		11.18	□□□□□ -0.62
CACNA1A-233	ENST00000636974	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.18	□□□□□ -0.62
CACNA1A-233	ENST00000636974	MAST1	Q9Y2H9	1570 aa		11.17	□□□□□ -0.62
CACNA1A-233	ENST00000636974	MYT1	Q01538	1121 aa		11.16	□□□□□ -0.62
CACNA1A-233	ENST00000636974	KIF15	Q9NS87	1388 aa		11.16	□□□□□ -0.62
CACNA1A-233	ENST00000636974	PKD2	Q13563	968 aa		11.16	□□□□□ -0.62
CACNA1A-233	ENST00000636974	NBPF8	Q3BBV2	869 aa		11.16	□□□□□ -0.62
CACNA1A-233	ENST00000636974	ROCK2	O75116	1388 aa	Known RBP	11.15	□□□□□ -0.62
CACNA1A-233	ENST00000636974	NUP155	O75694	1391 aa		11.15	□□□□□ -0.62
CACNA1A-233	ENST00000636974	ABCC2	Q92887	1545 aa		11.15	□□□□□ -0.63
CACNA1A-233	ENST00000636974	RALGAPB	Q86X10	1494 aa		11.15	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms