RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
SCN8A-212ENST00000636945 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
SCN8A-212ENST00000636945 FMN1Q68DA7 1419 aa10.54□□□□□ -0.72
SCN8A-212ENST00000636945 LRRIQ1Q96JM4 1722 aa10.54□□□□□ -0.72
SCN8A-212ENST00000636945 ANP32AP39687 249 aaKnown RBP10.54□□□□□ -0.72
SCN8A-212ENST00000636945 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
SCN8A-212ENST00000636945 FBLN2P98095 1184 aa10.52□□□□□ -0.73
SCN8A-212ENST00000636945 EIF4G3O43432 1585 aaKnown RBP10.52□□□□□ -0.73
SCN8A-212ENST00000636945 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.73
SCN8A-212ENST00000636945 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-212ENST00000636945 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
SCN8A-212ENST00000636945 EIF4G2P78344 907 aaKnown RBP eCLIP10.51□□□□□ -0.73
SCN8A-212ENST00000636945 ABCA10Q8WWZ4 1543 aa10.5□□□□□ -0.73
SCN8A-212ENST00000636945 CCDC136Q96JN2 1154 aa10.5□□□□□ -0.73
SCN8A-212ENST00000636945 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
SCN8A-212ENST00000636945 DHX29Q7Z478 1369 aaKnown RBP10.5□□□□□ -0.73
SCN8A-212ENST00000636945 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
SCN8A-212ENST00000636945 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
SCN8A-212ENST00000636945 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
SCN8A-212ENST00000636945 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
SCN8A-212ENST00000636945 FHOD3Q2V2M9 1422 aa10.49□□□□□ -0.73
SCN8A-212ENST00000636945 MRS2Q9HD23 443 aa10.49□□□□□ -0.73
SCN8A-212ENST00000636945 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
SCN8A-212ENST00000636945 SAMD9Q5K651 1589 aa10.48□□□□□ -0.73
SCN8A-212ENST00000636945 CHMP7Q8WUX9 453 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-212ENST00000636945 KDM6BO15054 1643 aa10.47□□□□□ -0.73
SCN8A-212ENST00000636945 SUPT6HQ7KZ85 1726 aaKnown RBP10.47□□□□□ -0.73
SCN8A-212ENST00000636945 RPRD2Q5VT52 1461 aaKnown RBP10.46□□□□□ -0.73
SCN8A-212ENST00000636945 FAM9BQ8IZU0 186 aa10.46□□□□□ -0.73
SCN8A-212ENST00000636945 EHBP1L1Q8N3D4 1523 aa10.46□□□□□ -0.73
SCN8A-212ENST00000636945 MIA2Q96PC5 1412 aa10.46□□□□□ -0.74
SCN8A-212ENST00000636945 CUL7Q14999 1698 aa10.45□□□□□ -0.74
SCN8A-212ENST00000636945 KIF7Q2M1P5 1343 aa10.45□□□□□ -0.74
SCN8A-212ENST00000636945 TCERG1O14776 1098 aaKnown RBP10.45□□□□□ -0.74
SCN8A-212ENST00000636945 MS4A1P11836 297 aa10.45□□□□□ -0.74
SCN8A-212ENST00000636945 MAGI1Q96QZ7 1491 aaPredicted RBP10.44□□□□□ -0.74
SCN8A-212ENST00000636945 LRPPRCP42704 1394 aaKnown RBP10.44□□□□□ -0.74
SCN8A-212ENST00000636945 MBD5Q9P267 1494 aa10.44□□□□□ -0.74
SCN8A-212ENST00000636945 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
SCN8A-212ENST00000636945 PPM1GO15355 546 aaPredicted RBP10.42□□□□□ -0.74
SCN8A-212ENST00000636945 BCORL1Q5H9F3 1711 aa10.42□□□□□ -0.74
SCN8A-212ENST00000636945 ANKRD30BQ9BXX2 1392 aa10.42□□□□□ -0.74
SCN8A-212ENST00000636945 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
SCN8A-212ENST00000636945 MAGI3Q5TCQ9 1506 aa10.41□□□□□ -0.74
SCN8A-212ENST00000636945 SYNJ2O15056 1496 aa10.4□□□□□ -0.74
SCN8A-212ENST00000636945 NEFMP07197 916 aa10.4□□□□□ -0.74
SCN8A-212ENST00000636945 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.74
SCN8A-212ENST00000636945 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.74
SCN8A-212ENST00000636945 PDE4AP27815 886 aa10.4□□□□□ -0.75
SCN8A-212ENST00000636945 PNISRQ8TF01 805 aaKnown RBP10.39□□□□□ -0.75
SCN8A-212ENST00000636945 MTUS2Q5JR59 1369 aa10.39□□□□□ -0.75
SCN8A-212ENST00000636945 KDM5CP41229 1560 aa10.38□□□□□ -0.75
SCN8A-212ENST00000636945 E9PCH4 1651 aa10.38□□□□□ -0.75
SCN8A-212ENST00000636945 PBRM1Q86U86 1689 aa10.38□□□□□ -0.75
SCN8A-212ENST00000636945 GSE1Q14687 1217 aa10.37□□□□□ -0.75
SCN8A-212ENST00000636945 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
SCN8A-212ENST00000636945 CHD1O14646 1710 aa10.37□□□□□ -0.75
SCN8A-212ENST00000636945 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
SCN8A-212ENST00000636945 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
SCN8A-212ENST00000636945 ROCK1Q13464 1354 aa10.36□□□□□ -0.75
SCN8A-212ENST00000636945 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
SCN8A-212ENST00000636945 KIF14Q15058 1648 aa10.36□□□□□ -0.75
SCN8A-212ENST00000636945 ZMYM4Q5VZL5 1548 aa10.36□□□□□ -0.75
SCN8A-212ENST00000636945 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
SCN8A-212ENST00000636945 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
SCN8A-212ENST00000636945 INSRP06213 1382 aa10.35□□□□□ -0.75
SCN8A-212ENST00000636945 GRIN2AQ12879 1464 aa10.34□□□□□ -0.75
SCN8A-212ENST00000636945 P3H3Q8IVL6 736 aa10.34□□□□□ -0.75
SCN8A-212ENST00000636945 LAS1LQ9Y4W2 734 aaKnown RBP10.34□□□□□ -0.75
SCN8A-212ENST00000636945 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
SCN8A-212ENST00000636945 BRD4O60885 1362 aaPredicted RBP10.33□□□□□ -0.76
SCN8A-212ENST00000636945 ADAMTS12P58397 1594 aa10.33□□□□□ -0.76
SCN8A-212ENST00000636945 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
SCN8A-212ENST00000636945 EXOC6Q8TAG9 804 aa10.32□□□□□ -0.76
SCN8A-212ENST00000636945 UHRF1BP1Q6BDS2 1440 aa10.32□□□□□ -0.76
SCN8A-212ENST00000636945 NFKBIBQ15653 356 aa10.31□□□□□ -0.76
SCN8A-212ENST00000636945 FAM43AQ8N2R8 423 aa10.31□□□□□ -0.76
SCN8A-212ENST00000636945 DNMT1P26358 1616 aaKnown RBP10.31□□□□□ -0.76
SCN8A-212ENST00000636945 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
SCN8A-212ENST00000636945 PDE3BQ13370 1112 aa10.3□□□□□ -0.76
SCN8A-212ENST00000636945 PZPP20742 1482 aa10.29□□□□□ -0.76
SCN8A-212ENST00000636945 FRAT1Q92837 279 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-212ENST00000636945 NUP160Q12769 1436 aa10.29□□□□□ -0.76
SCN8A-212ENST00000636945 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
SCN8A-212ENST00000636945 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
SCN8A-212ENST00000636945 RALGAPBQ86X10 1494 aa10.28□□□□□ -0.76
SCN8A-212ENST00000636945 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
SCN8A-212ENST00000636945 RCAN3Q9UKA8 241 aa10.28□□□□□ -0.76
SCN8A-212ENST00000636945 KDM2BQ8NHM5 1336 aa10.28□□□□□ -0.76
SCN8A-212ENST00000636945 USP47Q96K76 1375 aa10.28□□□□□ -0.76
SCN8A-212ENST00000636945 KIF15Q9NS87 1388 aa10.28□□□□□ -0.76
SCN8A-212ENST00000636945 DAPK1P53355 1430 aa10.27□□□□□ -0.77
SCN8A-212ENST00000636945 NPM2Q86SE8 214 aaKnown RBP10.27□□□□□ -0.77
SCN8A-212ENST00000636945 ATP1B4Q9UN42 357 aaPredicted RBP10.26□□□□□ -0.77
SCN8A-212ENST00000636945 RIMBP3CA6NJZ7 1639 aa10.26□□□□□ -0.77
SCN8A-212ENST00000636945 RIMBP3BA6NNM3 1639 aa10.26□□□□□ -0.77
SCN8A-212ENST00000636945 RIMBP3Q9UFD9 1639 aa10.26□□□□□ -0.77
SCN8A-212ENST00000636945 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
SCN8A-212ENST00000636945 JPH4Q96JJ6 628 aa10.25□□□□□ -0.77
SCN8A-212ENST00000636945 BLMP54132 1417 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms