RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	SENP3-EIF4A1	A0A087X0R7	540 aa		7.13	□□□□□ -1.27
RYR3-223	ENST00000636845	PHLDB1	Q86UU1	1377 aa		7.13	□□□□□ -1.27
RYR3-223	ENST00000636845	BACH2	Q9BYV9	841 aa		7.13	□□□□□ -1.27
RYR3-223	ENST00000636845	ERICH3	Q5RHP9	1530 aa		7.13	□□□□□ -1.27
RYR3-223	ENST00000636845	PRX	Q9BXM0	1461 aa		7.12	□□□□□ -1.27
RYR3-223	ENST00000636845	MS4A1	P11836	297 aa		7.11	□□□□□ -1.27
RYR3-223	ENST00000636845	SAMD1	Q6SPF0	538 aa	Predicted RBP	7.11	□□□□□ -1.27
RYR3-223	ENST00000636845	ZMYND15	Q9H091	742 aa		7.11	□□□□□ -1.27
RYR3-223	ENST00000636845	ARHGAP35	Q9NRY4	1499 aa		7.11	□□□□□ -1.27
RYR3-223	ENST00000636845	RNF123	Q5XPI4	1314 aa		7.1	□□□□□ -1.27
RYR3-223	ENST00000636845	SLC4A3	P48751	1232 aa		7.1	□□□□□ -1.27
RYR3-223	ENST00000636845	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	7.1	□□□□□ -1.27
RYR3-223	ENST00000636845	POLR3GL	Q9BT43	218 aa		7.1	□□□□□ -1.27
RYR3-223	ENST00000636845	TRH	P20396	242 aa	Predicted RBP	7.09	□□□□□ -1.27
RYR3-223	ENST00000636845	EXOC6	Q8TAG9	804 aa		7.09	□□□□□ -1.27
RYR3-223	ENST00000636845	NCAPD3	P42695	1498 aa		7.09	□□□□□ -1.27
RYR3-223	ENST00000636845	LRRC9	Q6ZRR7	1453 aa		7.09	□□□□□ -1.27
RYR3-223	ENST00000636845	CCDC7	Q96M83	1385 aa		7.08	□□□□□ -1.28
RYR3-223	ENST00000636845	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.08	□□□□□ -1.28
RYR3-223	ENST00000636845	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.08	□□□□□ -1.28
RYR3-223	ENST00000636845	TIAM1	Q13009	1591 aa		7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	ATXN8OS	P0DMR3	200 aa		7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	RRP1	P56182	461 aa	Known RBP	7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	TMC1	Q8TDI8	760 aa		7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	UACA	Q9BZF9	1416 aa		7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	CCDC18	Q5T9S5	1454 aa		7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	FRAT2	O75474	233 aa	Predicted RBP	7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	KIF27	Q86VH2	1401 aa		7.07	□□□□□ -1.28
RYR3-223	ENST00000636845	NCOA2	Q15596	1464 aa		7.06	□□□□□ -1.28
RYR3-223	ENST00000636845	PEG3	Q9GZU2	1588 aa		7.06	□□□□□ -1.28
RYR3-223	ENST00000636845	DCAF11	Q8TEB1	546 aa		7.06	□□□□□ -1.28
RYR3-223	ENST00000636845	P3H3	Q8IVL6	736 aa		7.06	□□□□□ -1.28
RYR3-223	ENST00000636845	HSP90AA1	P07900	732 aa	Known RBP	7.05	□□□□□ -1.28
RYR3-223	ENST00000636845	RCAN3	Q9UKA8	241 aa		7.05	□□□□□ -1.28
RYR3-223	ENST00000636845	PNN	Q9H307	717 aa	Known RBP	7.05	□□□□□ -1.28
RYR3-223	ENST00000636845	MAP3K1	Q13233	1512 aa		7.04	□□□□□ -1.28
RYR3-223	ENST00000636845	KIF7	Q2M1P5	1343 aa		7.04	□□□□□ -1.28
RYR3-223	ENST00000636845	NCOA1	Q15788	1441 aa		7.04	□□□□□ -1.28
RYR3-223	ENST00000636845	L1TD1	Q5T7N2	865 aa	Known RBP	7.03	□□□□□ -1.28
RYR3-223	ENST00000636845	L3MBTL2	Q969R5	705 aa		7.03	□□□□□ -1.28
RYR3-223	ENST00000636845	RRP9	O43818	475 aa	Known RBP	7.03	□□□□□ -1.28
RYR3-223	ENST00000636845	TOP2B	Q02880	1626 aa		7.03	□□□□□ -1.28
RYR3-223	ENST00000636845	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.02	□□□□□ -1.28
RYR3-223	ENST00000636845	SKAP1	Q86WV1	359 aa		7.02	□□□□□ -1.29
RYR3-223	ENST00000636845	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	7.01	□□□□□ -1.29
RYR3-223	ENST00000636845	HFM1	A2PYH4	1435 aa		7.01	□□□□□ -1.29
RYR3-223	ENST00000636845	FMN1	Q68DA7	1419 aa		7.01	□□□□□ -1.29
RYR3-223	ENST00000636845	DCAF8L1	A6NGE4	600 aa		7.01	□□□□□ -1.29
RYR3-223	ENST00000636845	PNISR	Q8TF01	805 aa	Known RBP	7.01	□□□□□ -1.29
RYR3-223	ENST00000636845	RRP7BP	Q9NSQ0	103 aa		7.01	□□□□□ -1.29
RYR3-223	ENST00000636845	IGSF3	O75054	1194 aa		7	□□□□□ -1.29
RYR3-223	ENST00000636845	MYCN	P04198	464 aa	Predicted RBP	7	□□□□□ -1.29
RYR3-223	ENST00000636845	CFAP44	Q96MT7	982 aa		7	□□□□□ -1.29
RYR3-223	ENST00000636845	POGK	Q9P215	609 aa		7	□□□□□ -1.29
RYR3-223	ENST00000636845	FAM161A	Q3B820	660 aa		6.99	□□□□□ -1.29
RYR3-223	ENST00000636845	CHIC2	Q9UKJ5	165 aa		6.99	□□□□□ -1.29
RYR3-223	ENST00000636845	FGD6	Q6ZV73	1430 aa		6.99	□□□□□ -1.29
RYR3-223	ENST00000636845	PLIN1	O60240	522 aa		6.99	□□□□□ -1.29
RYR3-223	ENST00000636845	PABPN1	Q86U42	306 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
RYR3-223	ENST00000636845	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	6.99	□□□□□ -1.29
RYR3-223	ENST00000636845	ZNF219	Q9P2Y4	722 aa	Predicted RBP	6.99	□□□□□ -1.29
RYR3-223	ENST00000636845	MTUS2	Q5JR59	1369 aa		6.98	□□□□□ -1.29
RYR3-223	ENST00000636845	CRBN	Q96SW2	442 aa		6.98	□□□□□ -1.29
RYR3-223	ENST00000636845	KDM5B	Q9UGL1	1544 aa		6.98	□□□□□ -1.29
RYR3-223	ENST00000636845	NAIP	Q13075	1403 aa		6.98	□□□□□ -1.29
RYR3-223	ENST00000636845	ZNF326	Q5BKZ1	582 aa	Known RBP	6.98	□□□□□ -1.29
RYR3-223	ENST00000636845	AQR	O60306	1485 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
RYR3-223	ENST00000636845	RGS3	P49796	1198 aa		6.97	□□□□□ -1.29
RYR3-223	ENST00000636845	PDE3B	Q13370	1112 aa		6.97	□□□□□ -1.29
RYR3-223	ENST00000636845	FBXO3	Q9UK99	471 aa		6.97	□□□□□ -1.29
RYR3-223	ENST00000636845	GOLGA6L3	A6NEY3	463 aa		6.97	□□□□□ -1.29
RYR3-223	ENST00000636845	NBPF8	Q3BBV2	869 aa		6.97	□□□□□ -1.29
RYR3-223	ENST00000636845	NPM1	P06748	294 aa	Known RBP eCLIP	6.96	□□□□□ -1.29
RYR3-223	ENST00000636845	CLCN1	P35523	988 aa		6.96	□□□□□ -1.29
RYR3-223	ENST00000636845	BECN1	Q14457	450 aa		6.96	□□□□□ -1.29
RYR3-223	ENST00000636845	MPHOSPH9	Q99550	1183 aa		6.96	□□□□□ -1.29
RYR3-223	ENST00000636845	SLK	Q9H2G2	1235 aa	Predicted RBP	6.96	□□□□□ -1.29
RYR3-223	ENST00000636845	ARID4B	Q4LE39	1312 aa	Predicted RBP	6.96	□□□□□ -1.3
RYR3-223	ENST00000636845	ARID3A	Q99856	593 aa		6.96	□□□□□ -1.3
RYR3-223	ENST00000636845	FOXD4L1	Q9NU39	408 aa		6.96	□□□□□ -1.3
RYR3-223	ENST00000636845	ZBTB12	Q9Y330	459 aa	Predicted RBP	6.96	□□□□□ -1.3
RYR3-223	ENST00000636845	PTPRK	Q15262	1439 aa		6.96	□□□□□ -1.3
RYR3-223	ENST00000636845	CHMP4A	Q9BY43	222 aa		6.96	□□□□□ -1.3
RYR3-223	ENST00000636845	KTN1	Q86UP2	1357 aa	Known RBP	6.95	□□□□□ -1.3
RYR3-223	ENST00000636845	PTPN23	Q9H3S7	1636 aa		6.95	□□□□□ -1.3
RYR3-223	ENST00000636845	CENPQ	Q7L2Z9	268 aa	Predicted RBP	6.95	□□□□□ -1.3
RYR3-223	ENST00000636845	CARMIL1	Q5VZK9	1371 aa		6.95	□□□□□ -1.3
RYR3-223	ENST00000636845	DHX29	Q7Z478	1369 aa	Known RBP	6.95	□□□□□ -1.3
RYR3-223	ENST00000636845		U3KPZ7	1027 aa	Predicted RBP	6.95	□□□□□ -1.3
RYR3-223	ENST00000636845	CDCA7L	Q96GN5	454 aa		6.94	□□□□□ -1.3
RYR3-223	ENST00000636845	BIVM-ERCC5	R4GMW8	1640 aa		6.94	□□□□□ -1.3
RYR3-223	ENST00000636845	C8orf34	Q49A92	452 aa		6.94	□□□□□ -1.3
RYR3-223	ENST00000636845	DHX37	Q8IY37	1157 aa	Known RBP	6.94	□□□□□ -1.3
RYR3-223	ENST00000636845	GZF1	Q9H116	711 aa	Predicted RBP	6.94	□□□□□ -1.3
RYR3-223	ENST00000636845	FHOD3	Q2V2M9	1422 aa		6.94	□□□□□ -1.3
RYR3-223	ENST00000636845	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.93	□□□□□ -1.3
RYR3-223	ENST00000636845	PCF11	O94913	1555 aa	Known RBP	6.93	□□□□□ -1.3
RYR3-223	ENST00000636845	IGF1R	P08069	1367 aa		6.93	□□□□□ -1.3
RYR3-223	ENST00000636845	XRCC6	P12956	609 aa	Known RBP eCLIP	6.93	□□□□□ -1.3
RYR3-223	ENST00000636845	TRIM44	Q96DX7	344 aa	Predicted RBP	6.93	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms