RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	KNSTRN	Q9Y448	316 aa		11.7	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	MPHOSPH9	Q99550	1183 aa		11.7	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	FRAT1	Q92837	279 aa	Predicted RBP	11.7	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	VSIG10	Q8N0Z9	540 aa		11.7	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	BRPF3	Q9ULD4	1205 aa		11.7	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	FMN1	Q68DA7	1419 aa		11.7	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	RRP1	P56182	461 aa	Known RBP	11.69	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	CFAP53	Q96M91	514 aa		11.69	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	CUX2	O14529	1486 aa		11.69	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	LMOD2	Q6P5Q4	547 aa		11.68	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	CDCA8	Q53HL2	280 aa		11.68	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.68	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	TNNT2	P45379	298 aa	Predicted RBP	11.68	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	GOLGA6L3	A6NEY3	463 aa		11.67	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	MS4A1	P11836	297 aa		11.67	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	RALBP1	Q15311	655 aa		11.66	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	NEUROD2	Q15784	382 aa		11.66	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	NFKBIB	Q15653	356 aa		11.66	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	PLIN1	O60240	522 aa		11.66	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	KTN1	Q86UP2	1357 aa	Known RBP	11.66	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	PTMA	P06454	111 aa	Known RBP	11.65	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	HDGF	P51858	240 aa	Known RBP	11.65	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.65	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	PDE3B	Q13370	1112 aa		11.65	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	WASHC2A	Q641Q2	1341 aa		11.65	□□□□□ -0.54
ARHGEF9-222	ENST00000636048	DCAF11	Q8TEB1	546 aa		11.64	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	RRBP1	Q9P2E9	1410 aa	Known RBP	11.64	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	HSCB	Q8IWL3	235 aa		11.64	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	FTSJ3	Q8IY81	847 aa	Known RBP	11.64	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	HSP90AB1	P08238	724 aa	Known RBP	11.64	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	MSN	P26038	577 aa	Known RBP	11.64	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.64	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	FAM161A	Q3B820	660 aa		11.63	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	CCDC18	Q5T9S5	1454 aa		11.63	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	WDR97	A6NE52	1622 aa		11.63	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	CNTLN	Q9NXG0	1405 aa		11.62	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	SENP3	Q9H4L4	574 aa	Predicted RBP	11.62	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	NLRP13	Q86W25	1043 aa		11.61	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	CRBN	Q96SW2	442 aa		11.61	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	POGK	Q9P215	609 aa		11.61	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	SMARCA2	P51531	1590 aa		11.61	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	ZRSR1	Q15695	479 aa	Known RBP	11.61	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	CCDC7	Q96M83	1385 aa		11.6	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	AKNA	Q7Z591	1439 aa		11.6	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.6	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	CCDC184	Q52MB2	194 aa		11.59	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	ARID3A	Q99856	593 aa		11.59	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	PHLDB1	Q86UU1	1377 aa		11.59	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	PKD2	Q13563	968 aa		11.59	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	FHOD3	Q2V2M9	1422 aa		11.59	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.58	□□□□□ -0.55
ARHGEF9-222	ENST00000636048	TMF1	P82094	1093 aa		11.58	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	ERCC6	Q03468	1493 aa		11.58	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	KIF15	Q9NS87	1388 aa		11.57	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	KIF7	Q2M1P5	1343 aa		11.57	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	GOLGA2	Q08379	1002 aa		11.57	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	ROCK2	O75116	1388 aa	Known RBP	11.57	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	SMARCA4	P51532	1647 aa		11.57	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	CASC1	Q6TDU7	716 aa		11.56	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	MAPK8IP3	Q9UPT6	1336 aa		11.56	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	ARAP1	Q96P48	1450 aa		11.56	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	PKNOX2	Q96KN3	472 aa		11.55	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	GBP4	Q96PP9	640 aa		11.55	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	BACH2	Q9BYV9	841 aa		11.55	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	FRAT2	O75474	233 aa	Predicted RBP	11.55	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	UACA	Q9BZF9	1416 aa		11.54	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	TULP1	O00294	542 aa	Predicted RBP	11.53	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	MFAP1	P55081	439 aa	Known RBP	11.53	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	TPRN	Q4KMQ1	711 aa		11.53	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	CHMP4B	Q9H444	224 aa	Known RBP	11.53	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	FAM43A	Q8N2R8	423 aa		11.53	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	USP47	Q96K76	1375 aa		11.52	□□□□□ -0.56
ARHGEF9-222	ENST00000636048	ST20-MTHFS	A0A0A6YYL1	179 aa		11.52	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	LRRC9	Q6ZRR7	1453 aa		11.52	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	PLCB2	Q00722	1185 aa		11.51	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	RWDD1	Q9H446	243 aa	Predicted RBP	11.51	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	SMG6	Q86US8	1419 aa	Known RBP	11.5	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	PMFBP1	Q8TBY8	1022 aa		11.5	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	TMX4	Q9H1E5	349 aa	Predicted RBP	11.49	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	PTMS	P20962	102 aa		11.49	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	CCDC146	Q8IYE0	955 aa		11.49	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	KANK1	Q14678	1352 aa		11.48	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	FGD6	Q6ZV73	1430 aa		11.48	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	DDX11L8	A8MPP1	907 aa		11.48	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	OS9	Q13438	667 aa	Predicted RBP	11.48	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	MLEC	Q14165	292 aa		11.47	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	UBE2Q2	Q8WVN8	375 aa		11.47	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	CLUAP1	Q96AJ1	413 aa		11.47	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	SYNJ1	O43426	1573 aa		11.47	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	EIF4G1	Q04637	1599 aa	Known RBP	11.46	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	FGD1	P98174	961 aa		11.46	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	CDCA7L	Q96GN5	454 aa		11.46	□□□□□ -0.57
ARHGEF9-222	ENST00000636048	FOXD4L1	Q9NU39	408 aa		11.46	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	NUP155	O75694	1391 aa		11.46	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.46	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	ERICH3	Q5RHP9	1530 aa		11.44	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	CHAF1A	Q13111	956 aa	Predicted RBP	11.43	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	PANK3	Q9H999	370 aa		11.43	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	COG6	Q9Y2V7	657 aa		11.43	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	PNISR	Q8TF01	805 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms