RNA–Protein interactions for RNA: ENST00000635978.1

CHRNA7-208, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-208ENST00000635978 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
CHRNA7-208ENST00000635978 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
CHRNA7-208ENST00000635978 ARID3CA6NKF2 412 aa12.18□□□□□ -0.46
CHRNA7-208ENST00000635978 PRXQ9BXM0 1461 aa12.18□□□□□ -0.46
CHRNA7-208ENST00000635978 RICTORQ6R327 1708 aa12.17□□□□□ -0.46
CHRNA7-208ENST00000635978 ZMYM4Q5VZL5 1548 aa12.17□□□□□ -0.46
CHRNA7-208ENST00000635978 DENND4BO75064 1496 aaPredicted RBP12.16□□□□□ -0.46
CHRNA7-208ENST00000635978 TTC37Q6PGP7 1564 aa12.16□□□□□ -0.46
CHRNA7-208ENST00000635978 FANCAO15360 1455 aa12.15□□□□□ -0.46
CHRNA7-208ENST00000635978 SPATA31D1Q6ZQQ2 1576 aa12.15□□□□□ -0.46
CHRNA7-208ENST00000635978 YEATS2Q9ULM3 1422 aa12.15□□□□□ -0.46
CHRNA7-208ENST00000635978 POGZQ7Z3K3 1410 aa12.14□□□□□ -0.47
CHRNA7-208ENST00000635978 AKNAQ7Z591 1439 aa12.14□□□□□ -0.47
CHRNA7-208ENST00000635978 ZFYVE16Q7Z3T8 1539 aa12.12□□□□□ -0.47
CHRNA7-208ENST00000635978 CAPN15O75808 1086 aa12.12□□□□□ -0.47
CHRNA7-208ENST00000635978 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
CHRNA7-208ENST00000635978 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
CHRNA7-208ENST00000635978 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
CHRNA7-208ENST00000635978 SAMD9Q5K651 1589 aa12.11□□□□□ -0.47
CHRNA7-208ENST00000635978 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
CHRNA7-208ENST00000635978 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
CHRNA7-208ENST00000635978 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
CHRNA7-208ENST00000635978 STRCQ7RTU9 1775 aa12.1□□□□□ -0.47
CHRNA7-208ENST00000635978 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
CHRNA7-208ENST00000635978 PREX1Q8TCU6 1659 aa12.08□□□□□ -0.48
CHRNA7-208ENST00000635978 ZBTB22O15209 634 aa12.08□□□□□ -0.48
CHRNA7-208ENST00000635978 HECW1Q76N89 1606 aa12.08□□□□□ -0.48
CHRNA7-208ENST00000635978 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
CHRNA7-208ENST00000635978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHRNA7-208ENST00000635978 APLP2Q06481 763 aa12.07□□□□□ -0.48
CHRNA7-208ENST00000635978 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
CHRNA7-208ENST00000635978 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
CHRNA7-208ENST00000635978 LTBP4Q8N2S1 1624 aa12.06□□□□□ -0.48
CHRNA7-208ENST00000635978 PTPRTO14522 1441 aa12.05□□□□□ -0.48
CHRNA7-208ENST00000635978 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
CHRNA7-208ENST00000635978 MLECQ14165 292 aa12.04□□□□□ -0.48
CHRNA7-208ENST00000635978 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
CHRNA7-208ENST00000635978 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
CHRNA7-208ENST00000635978 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
CHRNA7-208ENST00000635978 ATP10AO60312 1499 aa12.02□□□□□ -0.48
CHRNA7-208ENST00000635978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
CHRNA7-208ENST00000635978 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
CHRNA7-208ENST00000635978 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.49
CHRNA7-208ENST00000635978 DSG3P32926 999 aa12.01□□□□□ -0.49
CHRNA7-208ENST00000635978 SCAPERQ9BY12 1400 aa12.01□□□□□ -0.49
CHRNA7-208ENST00000635978 PLEKHD1A6NEE1 506 aa12□□□□□ -0.49
CHRNA7-208ENST00000635978 PLCH2O75038 1416 aa11.99□□□□□ -0.49
CHRNA7-208ENST00000635978 NCOA1Q15788 1441 aa11.96□□□□□ -0.49
CHRNA7-208ENST00000635978 KDM5CP41229 1560 aa11.95□□□□□ -0.5
CHRNA7-208ENST00000635978 REREQ9P2R6 1566 aa11.95□□□□□ -0.5
CHRNA7-208ENST00000635978 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
CHRNA7-208ENST00000635978 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
CHRNA7-208ENST00000635978 TRAPPC8Q9Y2L5 1435 aa11.93□□□□□ -0.5
CHRNA7-208ENST00000635978 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
CHRNA7-208ENST00000635978 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
CHRNA7-208ENST00000635978 CDK13Q14004 1512 aaKnown RBP11.92□□□□□ -0.5
CHRNA7-208ENST00000635978 C3P01024 1663 aa11.92□□□□□ -0.5
CHRNA7-208ENST00000635978 ZNF518AQ6AHZ1 1483 aa11.92□□□□□ -0.5
CHRNA7-208ENST00000635978 AGLP35573 1532 aa11.91□□□□□ -0.5
CHRNA7-208ENST00000635978 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
CHRNA7-208ENST00000635978 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
CHRNA7-208ENST00000635978 MLH3Q9UHC1 1453 aa11.89□□□□□ -0.51
CHRNA7-208ENST00000635978 AFAP1Q8N556 730 aa11.88□□□□□ -0.51
CHRNA7-208ENST00000635978 ABCA6Q8N139 1617 aa11.88□□□□□ -0.51
CHRNA7-208ENST00000635978 ZNF335Q9H4Z2 1342 aaPredicted RBP11.86□□□□□ -0.51
CHRNA7-208ENST00000635978 CAMSAP1Q5T5Y3 1602 aa11.86□□□□□ -0.51
CHRNA7-208ENST00000635978 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
CHRNA7-208ENST00000635978 NPATQ14207 1427 aa11.86□□□□□ -0.51
CHRNA7-208ENST00000635978 MED1Q15648 1581 aaPredicted RBP11.85□□□□□ -0.51
CHRNA7-208ENST00000635978 UBAP1LF5GYI3 381 aa11.85□□□□□ -0.51
CHRNA7-208ENST00000635978 KIF14Q15058 1648 aa11.85□□□□□ -0.51
CHRNA7-208ENST00000635978 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
CHRNA7-208ENST00000635978 PLA2R1Q13018 1463 aa11.83□□□□□ -0.52
CHRNA7-208ENST00000635978 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
CHRNA7-208ENST00000635978 RANGAP1P46060 587 aaPredicted RBP11.83□□□□□ -0.52
CHRNA7-208ENST00000635978 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
CHRNA7-208ENST00000635978 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
CHRNA7-208ENST00000635978 TROQ12816 1431 aaPredicted RBP11.81□□□□□ -0.52
CHRNA7-208ENST00000635978 EEA1Q15075 1411 aa11.81□□□□□ -0.52
CHRNA7-208ENST00000635978 ABCC1P33527 1531 aa11.81□□□□□ -0.52
CHRNA7-208ENST00000635978 HSPA1LP34931 641 aa11.8□□□□□ -0.52
CHRNA7-208ENST00000635978 MROH2AA6NES4 1674 aa11.8□□□□□ -0.52
CHRNA7-208ENST00000635978 ZNF142P52746 1687 aaPredicted RBP11.79□□□□□ -0.52
CHRNA7-208ENST00000635978 ABCB7O75027 752 aa11.79□□□□□ -0.52
CHRNA7-208ENST00000635978 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
CHRNA7-208ENST00000635978 PKD2Q13563 968 aa11.79□□□□□ -0.52
CHRNA7-208ENST00000635978 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
CHRNA7-208ENST00000635978 KIDINS220Q9ULH0 1771 aa11.78□□□□□ -0.52
CHRNA7-208ENST00000635978 ESF1Q9H501 851 aaKnown RBP11.77□□□□□ -0.53
CHRNA7-208ENST00000635978 MYO3AQ8NEV4 1616 aa11.77□□□□□ -0.53
CHRNA7-208ENST00000635978 CDC42BPBQ9Y5S2 1711 aa11.76□□□□□ -0.53
CHRNA7-208ENST00000635978 PTPRKQ15262 1439 aa11.76□□□□□ -0.53
CHRNA7-208ENST00000635978 FMN1Q68DA7 1419 aa11.76□□□□□ -0.53
CHRNA7-208ENST00000635978 CEP170BQ9Y4F5 1589 aaPredicted RBP11.75□□□□□ -0.53
CHRNA7-208ENST00000635978 ITSN2Q9NZM3 1697 aa11.75□□□□□ -0.53
CHRNA7-208ENST00000635978 CDK11AQ9UQ88 783 aaPredicted RBP11.75□□□□□ -0.53
CHRNA7-208ENST00000635978 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
CHRNA7-208ENST00000635978 ALKQ9UM73 1620 aa11.75□□□□□ -0.53
CHRNA7-208ENST00000635978 MYT1LQ9UL68 1186 aa11.74□□□□□ -0.53
CHRNA7-208ENST00000635978 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms