RNA–Protein interactions for RNA: ENST00000627300.2

LINC01440-208, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-208ENST00000627300 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
LINC01440-208ENST00000627300 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
LINC01440-208ENST00000627300 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
LINC01440-208ENST00000627300 PTPRTO14522 1441 aa12.17□□□□□ -0.46
LINC01440-208ENST00000627300 ARAP3Q8WWN8 1544 aa12.15□□□□□ -0.46
LINC01440-208ENST00000627300 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
LINC01440-208ENST00000627300 LHX8Q68G74 356 aa12.13□□□□□ -0.47
LINC01440-208ENST00000627300 STRCQ7RTU9 1775 aa12.13□□□□□ -0.47
LINC01440-208ENST00000627300 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
LINC01440-208ENST00000627300 UBAP1LF5GYI3 381 aa12.11□□□□□ -0.47
LINC01440-208ENST00000627300 HSPA1LP34931 641 aa12.11□□□□□ -0.47
LINC01440-208ENST00000627300 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
LINC01440-208ENST00000627300 CD109Q6YHK3 1445 aa12.1□□□□□ -0.47
LINC01440-208ENST00000627300 GABBR2O75899 941 aa12.09□□□□□ -0.47
LINC01440-208ENST00000627300 RGS17Q9UGC6 210 aaPredicted RBP12.09□□□□□ -0.47
LINC01440-208ENST00000627300 RIMS1Q86UR5 1692 aaKnown RBP12.07□□□□□ -0.48
LINC01440-208ENST00000627300 TNIKQ9UKE5 1360 aa12.06□□□□□ -0.48
LINC01440-208ENST00000627300 CLCN6P51797 869 aa12.06□□□□□ -0.48
LINC01440-208ENST00000627300 CUL7Q14999 1698 aa12.06□□□□□ -0.48
LINC01440-208ENST00000627300 ARID4BQ4LE39 1312 aaPredicted RBP12.06□□□□□ -0.48
LINC01440-208ENST00000627300 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
LINC01440-208ENST00000627300 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
LINC01440-208ENST00000627300 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
LINC01440-208ENST00000627300 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
LINC01440-208ENST00000627300 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.48
LINC01440-208ENST00000627300 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
LINC01440-208ENST00000627300 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
LINC01440-208ENST00000627300 RAPGEF3O95398 923 aa11.99□□□□□ -0.49
LINC01440-208ENST00000627300 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
LINC01440-208ENST00000627300 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
LINC01440-208ENST00000627300 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
LINC01440-208ENST00000627300 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.5
LINC01440-208ENST00000627300 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
LINC01440-208ENST00000627300 PREX1Q8TCU6 1659 aa11.95□□□□□ -0.5
LINC01440-208ENST00000627300 ZCCHC11Q5TAX3 1644 aaKnown RBP11.93□□□□□ -0.5
LINC01440-208ENST00000627300 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
LINC01440-208ENST00000627300 POGZQ7Z3K3 1410 aa11.92□□□□□ -0.5
LINC01440-208ENST00000627300 ZNF335Q9H4Z2 1342 aaPredicted RBP11.91□□□□□ -0.5
LINC01440-208ENST00000627300 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
LINC01440-208ENST00000627300 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
LINC01440-208ENST00000627300 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
LINC01440-208ENST00000627300 FRMPD1Q5SYB0 1578 aa11.89□□□□□ -0.51
LINC01440-208ENST00000627300 NCOA1Q15788 1441 aa11.89□□□□□ -0.51
LINC01440-208ENST00000627300 ARHGEF40Q8TER5 1519 aa11.87□□□□□ -0.51
LINC01440-208ENST00000627300 LOC105371045A0A1W2PR82 267 aa11.87□□□□□ -0.51
LINC01440-208ENST00000627300 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
LINC01440-208ENST00000627300 CEBPAP49715 358 aaPredicted RBP11.87□□□□□ -0.51
LINC01440-208ENST00000627300 PIP4K2BP78356 416 aa11.87□□□□□ -0.51
LINC01440-208ENST00000627300 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC01440-208ENST00000627300 KCNH8Q96L42 1107 aa11.87□□□□□ -0.51
LINC01440-208ENST00000627300 FANCAO15360 1455 aa11.87□□□□□ -0.51
LINC01440-208ENST00000627300 EEA1Q15075 1411 aa11.86□□□□□ -0.51
LINC01440-208ENST00000627300 TOM1O60784 492 aa11.86□□□□□ -0.51
LINC01440-208ENST00000627300 NEO1Q92859 1461 aa11.83□□□□□ -0.52
LINC01440-208ENST00000627300 ARHGEF12Q9NZN5 1544 aa11.82□□□□□ -0.52
LINC01440-208ENST00000627300 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
LINC01440-208ENST00000627300 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
LINC01440-208ENST00000627300 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
LINC01440-208ENST00000627300 AKNAQ7Z591 1439 aa11.8□□□□□ -0.52
LINC01440-208ENST00000627300 FHOD3Q2V2M9 1422 aa11.78□□□□□ -0.52
LINC01440-208ENST00000627300 SETD1BQ9UPS6 1966 aaKnown RBP11.78□□□□□ -0.52
LINC01440-208ENST00000627300 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
LINC01440-208ENST00000627300 MLECQ14165 292 aa11.78□□□□□ -0.52
LINC01440-208ENST00000627300 FAM9AQ8IZU1 332 aaPredicted RBP11.78□□□□□ -0.52
LINC01440-208ENST00000627300 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
LINC01440-208ENST00000627300 ALKQ9UM73 1620 aa11.77□□□□□ -0.53
LINC01440-208ENST00000627300 FER1L4A9Z1Z3 1794 aa11.77□□□□□ -0.53
LINC01440-208ENST00000627300 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
LINC01440-208ENST00000627300 IGF1RP08069 1367 aa11.73□□□□□ -0.53
LINC01440-208ENST00000627300 SETD1AO15047 1707 aaKnown RBP11.72□□□□□ -0.53
LINC01440-208ENST00000627300 DENND4BO75064 1496 aaPredicted RBP11.71□□□□□ -0.53
LINC01440-208ENST00000627300 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
LINC01440-208ENST00000627300 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
LINC01440-208ENST00000627300 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
LINC01440-208ENST00000627300 PTPRKQ15262 1439 aa11.7□□□□□ -0.54
LINC01440-208ENST00000627300 TRAPPC8Q9Y2L5 1435 aa11.7□□□□□ -0.54
LINC01440-208ENST00000627300 KIAA0556O60303 1618 aa11.7□□□□□ -0.54
LINC01440-208ENST00000627300 ABCA9Q8IUA7 1624 aa11.7□□□□□ -0.54
LINC01440-208ENST00000627300 PKD2Q13563 968 aa11.69□□□□□ -0.54
LINC01440-208ENST00000627300 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
LINC01440-208ENST00000627300 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
LINC01440-208ENST00000627300 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
LINC01440-208ENST00000627300 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
LINC01440-208ENST00000627300 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
LINC01440-208ENST00000627300 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
LINC01440-208ENST00000627300 RICTORQ6R327 1708 aa11.66□□□□□ -0.54
LINC01440-208ENST00000627300 EFCAB5A4FU69 1503 aa11.66□□□□□ -0.54
LINC01440-208ENST00000627300 CPS1P31327 1500 aa11.66□□□□□ -0.54
LINC01440-208ENST00000627300 TCOF1Q13428 1488 aaKnown RBP11.66□□□□□ -0.54
LINC01440-208ENST00000627300 IQGAP2Q13576 1575 aa11.66□□□□□ -0.54
LINC01440-208ENST00000627300 PLA2R1Q13018 1463 aa11.64□□□□□ -0.55
LINC01440-208ENST00000627300 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
LINC01440-208ENST00000627300 ABCA8O94911 1581 aa11.62□□□□□ -0.55
LINC01440-208ENST00000627300 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
LINC01440-208ENST00000627300 RAPGEF2Q9Y4G8 1499 aa11.62□□□□□ -0.55
LINC01440-208ENST00000627300 ATP10AO60312 1499 aa11.61□□□□□ -0.55
LINC01440-208ENST00000627300 GOLGA3Q08378 1498 aa11.59□□□□□ -0.55
LINC01440-208ENST00000627300 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
LINC01440-208ENST00000627300 SHANK2Q9UPX8 1470 aa11.58□□□□□ -0.56
LINC01440-208ENST00000627300 UBTFP17480 764 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms