RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 ILDR2Q71H61 639 aa26.05■■□□□ 1.76
CHRNA4-208ENST00000626188 SOCS7O14512 581 aa26.03■■□□□ 1.76
CHRNA4-208ENST00000626188 SCAPERQ9BY12 1400 aa26.03■■□□□ 1.76
CHRNA4-208ENST00000626188 DMRT2Q9Y5R5 561 aa26.02■■□□□ 1.76
CHRNA4-208ENST00000626188 PREX1Q8TCU6 1659 aa25.99■■□□□ 1.75
CHRNA4-208ENST00000626188 CEBPAP49715 358 aaPredicted RBP25.99■■□□□ 1.75
CHRNA4-208ENST00000626188 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
CHRNA4-208ENST00000626188 ATP10AO60312 1499 aa25.98■■□□□ 1.75
CHRNA4-208ENST00000626188 C9orf84Q5VXU9 1444 aa25.97■■□□□ 1.75
CHRNA4-208ENST00000626188 PLCH2O75038 1416 aa25.96■■□□□ 1.75
CHRNA4-208ENST00000626188 UHRF1BP1Q6BDS2 1440 aa25.93■■□□□ 1.74
CHRNA4-208ENST00000626188 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
CHRNA4-208ENST00000626188 EFCAB2Q5VUJ9 269 aa25.91■■□□□ 1.74
CHRNA4-208ENST00000626188 MYT1LQ9UL68 1186 aa25.9■■□□□ 1.74
CHRNA4-208ENST00000626188 STRCQ7RTU9 1775 aa25.88■■□□□ 1.73
CHRNA4-208ENST00000626188 ATP1B4Q9UN42 357 aaPredicted RBP25.88■■□□□ 1.73
CHRNA4-208ENST00000626188 SPATA31D1Q6ZQQ2 1576 aa25.86■■□□□ 1.73
CHRNA4-208ENST00000626188 EEA1Q15075 1411 aa25.84■■□□□ 1.73
CHRNA4-208ENST00000626188 ZNF518AQ6AHZ1 1483 aa25.83■■□□□ 1.73
CHRNA4-208ENST00000626188 MYO5CQ9NQX4 1742 aa25.81■■□□□ 1.72
CHRNA4-208ENST00000626188 ESF1Q9H501 851 aaKnown RBP25.81■■□□□ 1.72
CHRNA4-208ENST00000626188 PTPRTO14522 1441 aa25.8■■□□□ 1.72
CHRNA4-208ENST00000626188 AFAP1Q8N556 730 aa25.8■■□□□ 1.72
CHRNA4-208ENST00000626188 CDK11AQ9UQ88 783 aaPredicted RBP25.8■■□□□ 1.72
CHRNA4-208ENST00000626188 SETD1BQ9UPS6 1966 aaKnown RBP25.78■■□□□ 1.72
CHRNA4-208ENST00000626188 ARHGAP5Q13017 1502 aa25.76■■□□□ 1.71
CHRNA4-208ENST00000626188 KDM5CP41229 1560 aa25.73■■□□□ 1.71
CHRNA4-208ENST00000626188 KIF14Q15058 1648 aa25.72■■□□□ 1.71
CHRNA4-208ENST00000626188 DIP2CQ9Y2E4 1556 aa25.72■■□□□ 1.71
CHRNA4-208ENST00000626188 FMN1Q68DA7 1419 aa25.71■■□□□ 1.71
CHRNA4-208ENST00000626188 C3P01024 1663 aa25.71■■□□□ 1.71
CHRNA4-208ENST00000626188 LTBP4Q8N2S1 1624 aa25.69■■□□□ 1.7
CHRNA4-208ENST00000626188 TRAPPC8Q9Y2L5 1435 aa25.69■■□□□ 1.7
CHRNA4-208ENST00000626188 CLIP1P30622 1438 aa25.68■■□□□ 1.7
CHRNA4-208ENST00000626188 REREQ9P2R6 1566 aa25.68■■□□□ 1.7
CHRNA4-208ENST00000626188 IQSEC2Q5JU85 1478 aa25.67■■□□□ 1.7
CHRNA4-208ENST00000626188 TROQ12816 1431 aaPredicted RBP25.67■■□□□ 1.7
CHRNA4-208ENST00000626188 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
CHRNA4-208ENST00000626188 ABCA6Q8N139 1617 aa25.65■■□□□ 1.7
CHRNA4-208ENST00000626188 MLH3Q9UHC1 1453 aa25.65■■□□□ 1.7
CHRNA4-208ENST00000626188 NCOA1Q15788 1441 aa25.63■■□□□ 1.69
CHRNA4-208ENST00000626188 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
CHRNA4-208ENST00000626188 AGLP35573 1532 aa25.62■■□□□ 1.69
CHRNA4-208ENST00000626188 CNTLNQ9NXG0 1405 aa25.6■■□□□ 1.69
CHRNA4-208ENST00000626188 CAMSAP1Q5T5Y3 1602 aa25.56■■□□□ 1.68
CHRNA4-208ENST00000626188 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
CHRNA4-208ENST00000626188 UBAP1LF5GYI3 381 aa25.56■■□□□ 1.68
CHRNA4-208ENST00000626188 CDC42BPBQ9Y5S2 1711 aa25.55■■□□□ 1.68
CHRNA4-208ENST00000626188 ABCC1P33527 1531 aa25.53■■□□□ 1.68
CHRNA4-208ENST00000626188 NCKAP5LQ9HCH0 1330 aa25.53■■□□□ 1.68
CHRNA4-208ENST00000626188 ZNF335Q9H4Z2 1342 aaPredicted RBP25.52■■□□□ 1.68
CHRNA4-208ENST00000626188 NPATQ14207 1427 aa25.52■■□□□ 1.68
CHRNA4-208ENST00000626188 PREX2Q70Z35 1606 aa25.5■■□□□ 1.67
CHRNA4-208ENST00000626188 ITSN2Q9NZM3 1697 aa25.5■■□□□ 1.67
CHRNA4-208ENST00000626188 ZMYM3Q14202 1370 aa25.48■■□□□ 1.67
CHRNA4-208ENST00000626188 KIDINS220Q9ULH0 1771 aa25.48■■□□□ 1.67
CHRNA4-208ENST00000626188 LRRIQ1Q96JM4 1722 aa25.45■■□□□ 1.66
CHRNA4-208ENST00000626188 MROH2AA6NES4 1674 aa25.45■■□□□ 1.66
CHRNA4-208ENST00000626188 PKD2Q13563 968 aa25.44■■□□□ 1.66
CHRNA4-208ENST00000626188 ZNF777Q9ULD5 760 aaPredicted RBP25.44■■□□□ 1.66
CHRNA4-208ENST00000626188 SPAG9O60271 1321 aaKnown RBP25.4■■□□□ 1.66
CHRNA4-208ENST00000626188 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
CHRNA4-208ENST00000626188 SAMD9LQ8IVG5 1584 aa25.39■■□□□ 1.66
CHRNA4-208ENST00000626188 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.66
CHRNA4-208ENST00000626188 CCDC18Q5T9S5 1454 aa25.39■■□□□ 1.65
CHRNA4-208ENST00000626188 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
CHRNA4-208ENST00000626188 PPP6R1Q9UPN7 881 aa25.37■■□□□ 1.65
CHRNA4-208ENST00000626188 MYO3AQ8NEV4 1616 aa25.37■■□□□ 1.65
CHRNA4-208ENST00000626188 CLTCQ00610 1675 aaKnown RBP25.36■■□□□ 1.65
CHRNA4-208ENST00000626188 CDC42BPAQ5VT25 1732 aa25.35■■□□□ 1.65
CHRNA4-208ENST00000626188 CEP170BQ9Y4F5 1589 aaPredicted RBP25.35■■□□□ 1.65
CHRNA4-208ENST00000626188 SYCP2Q9BX26 1530 aa25.34■■□□□ 1.65
CHRNA4-208ENST00000626188 ZNF142P52746 1687 aaPredicted RBP25.34■■□□□ 1.65
CHRNA4-208ENST00000626188 HNRNPMP52272 730 aaKnown RBP eCLIP25.34■■□□□ 1.65
CHRNA4-208ENST00000626188 GGT6Q6P531 493 aa25.34■■□□□ 1.65
CHRNA4-208ENST00000626188 TCOF1Q13428 1488 aaKnown RBP25.34■■□□□ 1.65
CHRNA4-208ENST00000626188 CASKIN1Q8WXD9 1431 aa25.33■■□□□ 1.65
CHRNA4-208ENST00000626188 PTPRKQ15262 1439 aa25.32■■□□□ 1.64
CHRNA4-208ENST00000626188 PIP4K2BP78356 416 aa25.32■■□□□ 1.64
CHRNA4-208ENST00000626188 HSPA1LP34931 641 aa25.3■■□□□ 1.64
CHRNA4-208ENST00000626188 ATP7AQ04656 1500 aa25.3■■□□□ 1.64
CHRNA4-208ENST00000626188 A2MP01023 1474 aa25.29■■□□□ 1.64
CHRNA4-208ENST00000626188 TOM1O60784 492 aa25.28■■□□□ 1.64
CHRNA4-208ENST00000626188 MED1Q15648 1581 aaPredicted RBP25.27■■□□□ 1.64
CHRNA4-208ENST00000626188 GPATCH8Q9UKJ3 1502 aaKnown RBP25.25■■□□□ 1.63
CHRNA4-208ENST00000626188 PLXNC1O60486 1568 aa25.25■■□□□ 1.63
CHRNA4-208ENST00000626188 CFDP1Q9UEE9 299 aaPredicted RBP25.24■■□□□ 1.63
CHRNA4-208ENST00000626188 A2ML1A8K2U0 1454 aa25.22■■□□□ 1.63
CHRNA4-208ENST00000626188 PLEKHH2Q8IVE3 1493 aa25.22■■□□□ 1.63
CHRNA4-208ENST00000626188 KIAA1107Q9UPP5 1409 aa25.22■■□□□ 1.63
CHRNA4-208ENST00000626188 INO80Q9ULG1 1556 aaPredicted RBP25.22■■□□□ 1.63
CHRNA4-208ENST00000626188 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
CHRNA4-208ENST00000626188 CPS1P31327 1500 aa25.19■■□□□ 1.62
CHRNA4-208ENST00000626188 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
CHRNA4-208ENST00000626188 DNMT1P26358 1616 aaKnown RBP25.19■■□□□ 1.62
CHRNA4-208ENST00000626188 CCNB3Q8WWL7 1395 aa25.18■■□□□ 1.62
CHRNA4-208ENST00000626188 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
CHRNA4-208ENST00000626188 ADGBQ8N7X0 1667 aa25.13■■□□□ 1.61
CHRNA4-208ENST00000626188 POLR1AO95602 1720 aaPredicted RBP25.12■■□□□ 1.61
CHRNA4-208ENST00000626188 TNRQ92752 1358 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms