RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 ADAMTS12P58397 1594 aa6.09□□□□□ -1.44
PTP4A1-205ENST00000626021 SAMD9Q5K651 1589 aa6.09□□□□□ -1.44
PTP4A1-205ENST00000626021 SUPT16HQ9Y5B9 1047 aaKnown RBP6.08□□□□□ -1.44
PTP4A1-205ENST00000626021 MAP3K1Q13233 1512 aa6.08□□□□□ -1.44
PTP4A1-205ENST00000626021 ANP32EQ9BTT0 268 aa6.07□□□□□ -1.44
PTP4A1-205ENST00000626021 IGF1RP08069 1367 aa6.07□□□□□ -1.44
PTP4A1-205ENST00000626021 ARHGAP35Q9NRY4 1499 aa6.07□□□□□ -1.44
PTP4A1-205ENST00000626021 RAD54L2Q9Y4B4 1467 aa6.07□□□□□ -1.44
PTP4A1-205ENST00000626021 LRRIQ1Q96JM4 1722 aa6.07□□□□□ -1.44
PTP4A1-205ENST00000626021 PCF11O94913 1555 aaKnown RBP6.05□□□□□ -1.44
PTP4A1-205ENST00000626021 TIAM1Q13009 1591 aa6.05□□□□□ -1.44
PTP4A1-205ENST00000626021 ATMINO43313 823 aaPredicted RBP6.05□□□□□ -1.44
PTP4A1-205ENST00000626021 PAK3O75914 559 aaPredicted RBP6.05□□□□□ -1.44
PTP4A1-205ENST00000626021 UBTFP17480 764 aaKnown RBP6.05□□□□□ -1.44
PTP4A1-205ENST00000626021 TSHZ2Q9NRE2 1034 aa6.05□□□□□ -1.44
PTP4A1-205ENST00000626021 CARMIL1Q5VZK9 1371 aa6.04□□□□□ -1.44
PTP4A1-205ENST00000626021 EIF4G3O43432 1585 aaKnown RBP6.04□□□□□ -1.44
PTP4A1-205ENST00000626021 GAPVD1Q14C86 1478 aa6.04□□□□□ -1.44
PTP4A1-205ENST00000626021 AQRO60306 1485 aaKnown RBP eCLIP6.03□□□□□ -1.443e-8■■■■■ 28.4
PTP4A1-205ENST00000626021 ST18O60284 1047 aa6.02□□□□□ -1.45
PTP4A1-205ENST00000626021 DHX57Q6P158 1386 aaKnown RBP6.02□□□□□ -1.45
PTP4A1-205ENST00000626021 IFT140Q96RY7 1462 aa6.02□□□□□ -1.45
PTP4A1-205ENST00000626021 FYCO1Q9BQS8 1478 aa6.02□□□□□ -1.45
PTP4A1-205ENST00000626021 TMEM121BQ9BXQ6 578 aaPredicted RBP6.01□□□□□ -1.45
PTP4A1-205ENST00000626021 IQGAP2Q13576 1575 aa6□□□□□ -1.45
PTP4A1-205ENST00000626021 SNAPC4Q5SXM2 1469 aa5.99□□□□□ -1.45
PTP4A1-205ENST00000626021 GRIN2BQ13224 1484 aa5.99□□□□□ -1.45
PTP4A1-205ENST00000626021 FHAD1B1AJZ9 1412 aa5.99□□□□□ -1.45
PTP4A1-205ENST00000626021 BCL11AQ9H165 835 aa5.98□□□□□ -1.45
PTP4A1-205ENST00000626021 RRBP1Q9P2E9 1410 aaKnown RBP5.98□□□□□ -1.45
PTP4A1-205ENST00000626021 UGGT2Q9NYU1 1516 aa5.97□□□□□ -1.45
PTP4A1-205ENST00000626021 PHF12Q96QT6 1004 aa5.97□□□□□ -1.45
PTP4A1-205ENST00000626021 HECW1Q76N89 1606 aa5.97□□□□□ -1.45
PTP4A1-205ENST00000626021 CASKIN1Q8WXD9 1431 aa5.97□□□□□ -1.45
PTP4A1-205ENST00000626021 MAGI1Q96QZ7 1491 aaPredicted RBP5.96□□□□□ -1.45
PTP4A1-205ENST00000626021 SUPT6HQ7KZ85 1726 aaKnown RBP5.96□□□□□ -1.46
PTP4A1-205ENST00000626021 KIAA0556O60303 1618 aa5.96□□□□□ -1.46
PTP4A1-205ENST00000626021 LRRC9Q6ZRR7 1453 aa5.95□□□□□ -1.46
PTP4A1-205ENST00000626021 FMN1Q68DA7 1419 aa5.95□□□□□ -1.46
PTP4A1-205ENST00000626021 EHBP1L1Q8N3D4 1523 aa5.95□□□□□ -1.46
PTP4A1-205ENST00000626021 ZNF608Q9ULD9 1512 aaPredicted RBP5.95□□□□□ -1.46
PTP4A1-205ENST00000626021 TDRD9Q8NDG6 1382 aaKnown RBP5.94□□□□□ -1.46
PTP4A1-205ENST00000626021 CHD1O14646 1710 aa5.94□□□□□ -1.46
PTP4A1-205ENST00000626021 ERCC6Q03468 1493 aa5.93□□□□□ -1.46
PTP4A1-205ENST00000626021 GRIN2AQ12879 1464 aa5.93□□□□□ -1.46
PTP4A1-205ENST00000626021 CEP170Q5SW79 1584 aa5.93□□□□□ -1.46
PTP4A1-205ENST00000626021 FHOD3Q2V2M9 1422 aa5.93□□□□□ -1.46
PTP4A1-205ENST00000626021 CCDC18Q5T9S5 1454 aa5.93□□□□□ -1.46
PTP4A1-205ENST00000626021 ARHGEF11O15085 1522 aa5.93□□□□□ -1.46
PTP4A1-205ENST00000626021 POTEFA5A3E0 1075 aa5.93□□□□□ -1.46
PTP4A1-205ENST00000626021 ADCY10Q96PN6 1610 aa5.92□□□□□ -1.46
PTP4A1-205ENST00000626021 CCER2I3L3R5 266 aa5.92□□□□□ -1.46
PTP4A1-205ENST00000626021 TIMELESSQ9UNS1 1208 aa5.92□□□□□ -1.46
PTP4A1-205ENST00000626021 GCC2Q8IWJ2 1684 aa5.92□□□□□ -1.46
PTP4A1-205ENST00000626021 RAPGEF6Q8TEU7 1601 aa5.92□□□□□ -1.46
PTP4A1-205ENST00000626021 SYNJ2O15056 1496 aa5.91□□□□□ -1.46
PTP4A1-205ENST00000626021 RBM19Q9Y4C8 960 aaKnown RBP5.91□□□□□ -1.46
PTP4A1-205ENST00000626021 KIAA0586Q9BVV6 1533 aa5.91□□□□□ -1.46
PTP4A1-205ENST00000626021 SHROOM2Q13796 1616 aa5.9□□□□□ -1.46
PTP4A1-205ENST00000626021 DISP1Q96F81 1524 aa5.9□□□□□ -1.47
PTP4A1-205ENST00000626021 ITSN2Q9NZM3 1697 aa5.9□□□□□ -1.47
PTP4A1-205ENST00000626021 MYT1LQ9UL68 1186 aa5.9□□□□□ -1.47
PTP4A1-205ENST00000626021 NUP160Q12769 1436 aa5.9□□□□□ -1.47
PTP4A1-205ENST00000626021 MAPKBP1O60336 1514 aa5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 CCNB3Q8WWL7 1395 aa5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 SNPHO15079 494 aa5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 FKBP8Q14318 412 aa5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 MS4A3Q96HJ5 214 aa5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 MAGI3Q5TCQ9 1506 aa5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 NEFLP07196 543 aa5.89□□□□□ -1.47
PTP4A1-205ENST00000626021 CROCC2H7BZ55 1655 aa5.88□□□□□ -1.47
PTP4A1-205ENST00000626021 FANCIQ9NVI1 1328 aa5.88□□□□□ -1.47
PTP4A1-205ENST00000626021 ATN1P54259 1190 aaPredicted RBP5.88□□□□□ -1.47
PTP4A1-205ENST00000626021 PTPN23Q9H3S7 1636 aa5.88□□□□□ -1.47
PTP4A1-205ENST00000626021 ADGBQ8N7X0 1667 aa5.88□□□□□ -1.47
PTP4A1-205ENST00000626021 PPP1R15AO75807 674 aaPredicted RBP5.87□□□□□ -1.47
PTP4A1-205ENST00000626021 KANK4Q5T7N3 995 aaPredicted RBP5.87□□□□□ -1.47
PTP4A1-205ENST00000626021 ERICH6BQ5W0A0 696 aa5.87□□□□□ -1.47
PTP4A1-205ENST00000626021 EPRSP07814 1512 aaKnown RBP5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 SETD5Q9C0A6 1442 aa5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 TCOF1Q13428 1488 aaKnown RBP5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 MKRN4PQ13434 485 aaPredicted RBP5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 SLAIN1Q8ND83 568 aa5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 CREBZFQ9NS37 354 aa5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 PHLDB1Q86UU1 1377 aa5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 RAB3GAP2Q9H2M9 1393 aa5.86□□□□□ -1.47
PTP4A1-205ENST00000626021 NCOA2Q15596 1464 aa5.85□□□□□ -1.47
PTP4A1-205ENST00000626021 ABCA8O94911 1581 aa5.85□□□□□ -1.47
PTP4A1-205ENST00000626021 KCNH8Q96L42 1107 aa5.85□□□□□ -1.47
PTP4A1-205ENST00000626021 FGD6Q6ZV73 1430 aa5.85□□□□□ -1.47
PTP4A1-205ENST00000626021 CDC42BPAQ5VT25 1732 aa5.85□□□□□ -1.47
PTP4A1-205ENST00000626021 DNMT1P26358 1616 aaKnown RBP5.84□□□□□ -1.47
PTP4A1-205ENST00000626021 CDK13Q14004 1512 aaKnown RBP5.84□□□□□ -1.47
PTP4A1-205ENST00000626021 NUP153P49790 1475 aaKnown RBP5.84□□□□□ -1.47
PTP4A1-205ENST00000626021 MYOM3Q5VTT5 1437 aa5.84□□□□□ -1.47
PTP4A1-205ENST00000626021 NPM1P06748 294 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTP4A1-205ENST00000626021 RANGAP1P46060 587 aaPredicted RBP5.84□□□□□ -1.47
PTP4A1-205ENST00000626021 BCANQ96GW7 911 aa5.83□□□□□ -1.48
PTP4A1-205ENST00000626021 AKNAQ7Z591 1439 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms