RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 NEFMP07197 916 aa18.62■□□□□ 0.57
UBE3A-209ENST00000625778 EXOC6Q8TAG9 804 aa18.61■□□□□ 0.57
UBE3A-209ENST00000625778 SKAP1Q86WV1 359 aa18.6■□□□□ 0.57
UBE3A-209ENST00000625778 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
UBE3A-209ENST00000625778 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
UBE3A-209ENST00000625778 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.57
UBE3A-209ENST00000625778 KDM2AQ9Y2K7 1162 aa18.58■□□□□ 0.57
UBE3A-209ENST00000625778 EFCAB5A4FU69 1503 aa18.58■□□□□ 0.56
UBE3A-209ENST00000625778 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
UBE3A-209ENST00000625778 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
UBE3A-209ENST00000625778 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
UBE3A-209ENST00000625778 KDM6BO15054 1643 aa18.56■□□□□ 0.56
UBE3A-209ENST00000625778 POLA1P09884 1462 aaPredicted RBP18.54■□□□□ 0.56
UBE3A-209ENST00000625778 PLIN1O60240 522 aa18.51■□□□□ 0.55
UBE3A-209ENST00000625778 UBE2Q2Q8WVN8 375 aa18.51■□□□□ 0.55
UBE3A-209ENST00000625778 PDE4AP27815 886 aa18.51■□□□□ 0.55
UBE3A-209ENST00000625778 PNISRQ8TF01 805 aaKnown RBP18.5■□□□□ 0.55
UBE3A-209ENST00000625778 USP47Q96K76 1375 aa18.5■□□□□ 0.55
UBE3A-209ENST00000625778 ANKRD30BQ9BXX2 1392 aa18.49■□□□□ 0.55
UBE3A-209ENST00000625778 SLC4A3P48751 1232 aa18.49■□□□□ 0.55
UBE3A-209ENST00000625778 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
UBE3A-209ENST00000625778 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
UBE3A-209ENST00000625778 CARD11Q9BXL7 1154 aa18.48■□□□□ 0.55
UBE3A-209ENST00000625778 NESP48681 1621 aa18.48■□□□□ 0.55
UBE3A-209ENST00000625778 RCAN3Q9UKA8 241 aa18.47■□□□□ 0.55
UBE3A-209ENST00000625778 MAGI3Q5TCQ9 1506 aa18.47■□□□□ 0.55
UBE3A-209ENST00000625778 ABCA10Q8WWZ4 1543 aa18.46■□□□□ 0.55
UBE3A-209ENST00000625778 PKD2Q13563 968 aa18.45■□□□□ 0.54
UBE3A-209ENST00000625778 DHX29Q7Z478 1369 aaKnown RBP18.45■□□□□ 0.54
UBE3A-209ENST00000625778 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
UBE3A-209ENST00000625778 EHBP1L1Q8N3D4 1523 aa18.45■□□□□ 0.54
UBE3A-209ENST00000625778 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
UBE3A-209ENST00000625778 CDCA7LQ96GN5 454 aa18.44■□□□□ 0.54
UBE3A-209ENST00000625778 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
UBE3A-209ENST00000625778 UGGT2Q9NYU1 1516 aa18.43■□□□□ 0.54
UBE3A-209ENST00000625778 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
UBE3A-209ENST00000625778 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
UBE3A-209ENST00000625778 ST20-MTHFSA0A0A6YYL1 179 aa18.42■□□□□ 0.54
UBE3A-209ENST00000625778 DAXXQ9UER7 740 aaPredicted RBP18.42■□□□□ 0.54
UBE3A-209ENST00000625778 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
UBE3A-209ENST00000625778 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
UBE3A-209ENST00000625778 BRPF3Q9ULD4 1205 aa18.4■□□□□ 0.54
UBE3A-209ENST00000625778 PKNOX2Q96KN3 472 aa18.38■□□□□ 0.53
UBE3A-209ENST00000625778 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
UBE3A-209ENST00000625778 TEX14Q8IWB6 1497 aa18.38■□□□□ 0.53
UBE3A-209ENST00000625778 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
UBE3A-209ENST00000625778 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
UBE3A-209ENST00000625778 BACH2Q9BYV9 841 aa18.38■□□□□ 0.53
UBE3A-209ENST00000625778 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
UBE3A-209ENST00000625778 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
UBE3A-209ENST00000625778 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
UBE3A-209ENST00000625778 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
UBE3A-209ENST00000625778 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
UBE3A-209ENST00000625778 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
UBE3A-209ENST00000625778 DAPK1P53355 1430 aa18.34■□□□□ 0.53
UBE3A-209ENST00000625778 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
UBE3A-209ENST00000625778 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.53
UBE3A-209ENST00000625778 RGL3Q3MIN7 710 aa18.33■□□□□ 0.52
UBE3A-209ENST00000625778 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
UBE3A-209ENST00000625778 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
UBE3A-209ENST00000625778 CUL7Q14999 1698 aa18.32■□□□□ 0.52
UBE3A-209ENST00000625778 ABCC5O15440 1437 aa18.32■□□□□ 0.52
UBE3A-209ENST00000625778 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
UBE3A-209ENST00000625778 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
UBE3A-209ENST00000625778 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
UBE3A-209ENST00000625778 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
UBE3A-209ENST00000625778 GCC2Q8IWJ2 1684 aa18.29■□□□□ 0.52
UBE3A-209ENST00000625778 RGS3P49796 1198 aa18.29■□□□□ 0.52
UBE3A-209ENST00000625778 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
UBE3A-209ENST00000625778 MIA2Q96PC5 1412 aa18.28■□□□□ 0.52
UBE3A-209ENST00000625778 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
UBE3A-209ENST00000625778 SAMD9Q5K651 1589 aa18.27■□□□□ 0.52
UBE3A-209ENST00000625778 RALBP1Q15311 655 aa18.27■□□□□ 0.51
UBE3A-209ENST00000625778 NFKBIBQ15653 356 aa18.27■□□□□ 0.51
UBE3A-209ENST00000625778 NLRP13Q86W25 1043 aa18.25■□□□□ 0.51
UBE3A-209ENST00000625778 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
UBE3A-209ENST00000625778 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
UBE3A-209ENST00000625778 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
UBE3A-209ENST00000625778 NUP155O75694 1391 aa18.25■□□□□ 0.51
UBE3A-209ENST00000625778 GSE1Q14687 1217 aa18.25■□□□□ 0.51
UBE3A-209ENST00000625778 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
UBE3A-209ENST00000625778 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
UBE3A-209ENST00000625778 URB2Q14146 1524 aaKnown RBP18.24■□□□□ 0.51
UBE3A-209ENST00000625778 MS4A1P11836 297 aa18.23■□□□□ 0.51
UBE3A-209ENST00000625778 BRD4O60885 1362 aaPredicted RBP18.23■□□□□ 0.51
UBE3A-209ENST00000625778 ARXQ96QS3 562 aa18.22■□□□□ 0.51
UBE3A-209ENST00000625778 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
UBE3A-209ENST00000625778 KTN1Q86UP2 1357 aaKnown RBP18.22■□□□□ 0.51
UBE3A-209ENST00000625778 VSIG10Q8N0Z9 540 aa18.21■□□□□ 0.51
UBE3A-209ENST00000625778 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
UBE3A-209ENST00000625778 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
UBE3A-209ENST00000625778 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
UBE3A-209ENST00000625778 PZPP20742 1482 aa18.2■□□□□ 0.5
UBE3A-209ENST00000625778 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
UBE3A-209ENST00000625778 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
UBE3A-209ENST00000625778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.59e-8■■■□□ 14.6
UBE3A-209ENST00000625778 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
UBE3A-209ENST00000625778 FBLN2P98095 1184 aa18.18■□□□□ 0.5
UBE3A-209ENST00000625778 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
UBE3A-209ENST00000625778 FRAT2O75474 233 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms