RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
AP000542.3-201ENST00000623391 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
AP000542.3-201ENST00000623391 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
AP000542.3-201ENST00000623391 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
AP000542.3-201ENST00000623391 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
AP000542.3-201ENST00000623391 SPAG9O60271 1321 aaKnown RBP11.53□□□□□ -0.56
AP000542.3-201ENST00000623391 FTSJ3Q8IY81 847 aaKnown RBP11.53□□□□□ -0.56
AP000542.3-201ENST00000623391 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
AP000542.3-201ENST00000623391 HDGFL2Q7Z4V5 671 aaPredicted RBP11.52□□□□□ -0.57
AP000542.3-201ENST00000623391 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
AP000542.3-201ENST00000623391 DNMBPQ6XZF7 1577 aa11.51□□□□□ -0.57
AP000542.3-201ENST00000623391 CALD1Q05682 793 aaKnown RBP11.51□□□□□ -0.57
AP000542.3-201ENST00000623391 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
AP000542.3-201ENST00000623391 CC2D2AQ9P2K1 1620 aa11.5□□□□□ -0.57
AP000542.3-201ENST00000623391 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
AP000542.3-201ENST00000623391 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
AP000542.3-201ENST00000623391 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
AP000542.3-201ENST00000623391 LRRC9Q6ZRR7 1453 aa11.49□□□□□ -0.57
AP000542.3-201ENST00000623391 MORC1Q86VD1 984 aa11.49□□□□□ -0.57
AP000542.3-201ENST00000623391 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
AP000542.3-201ENST00000623391 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
AP000542.3-201ENST00000623391 FGD6Q6ZV73 1430 aa11.48□□□□□ -0.57
AP000542.3-201ENST00000623391 CC2D1BQ5T0F9 858 aaKnown RBP11.48□□□□□ -0.57
AP000542.3-201ENST00000623391 CCDC144AA2RUR9 1427 aa11.47□□□□□ -0.57
AP000542.3-201ENST00000623391 GOLGA6L22H0YM25 854 aa11.47□□□□□ -0.57
AP000542.3-201ENST00000623391 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
AP000542.3-201ENST00000623391 HECW1Q76N89 1606 aa11.46□□□□□ -0.57
AP000542.3-201ENST00000623391 SRPK2P78362 688 aaKnown RBP11.46□□□□□ -0.57
AP000542.3-201ENST00000623391 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
AP000542.3-201ENST00000623391 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.58
AP000542.3-201ENST00000623391 ZBTB7CA1YPR0 619 aa11.45□□□□□ -0.58
AP000542.3-201ENST00000623391 NCLP19338 710 aaKnown RBP11.45□□□□□ -0.58
AP000542.3-201ENST00000623391 HNRNPMP52272 730 aaKnown RBP eCLIP11.45□□□□□ -0.58
AP000542.3-201ENST00000623391 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
AP000542.3-201ENST00000623391 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
AP000542.3-201ENST00000623391 GGT6Q6P531 493 aa11.44□□□□□ -0.58
AP000542.3-201ENST00000623391 CUL7Q14999 1698 aa11.44□□□□□ -0.58
AP000542.3-201ENST00000623391 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
AP000542.3-201ENST00000623391 PRXQ9BXM0 1461 aa11.44□□□□□ -0.58
AP000542.3-201ENST00000623391 PLEKHH2Q8IVE3 1493 aa11.43□□□□□ -0.58
AP000542.3-201ENST00000623391 IRX6P78412 446 aaPredicted RBP11.43□□□□□ -0.58
AP000542.3-201ENST00000623391 PDE3BQ13370 1112 aa11.43□□□□□ -0.58
AP000542.3-201ENST00000623391 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
AP000542.3-201ENST00000623391 KIF3BO15066 747 aa11.43□□□□□ -0.58
AP000542.3-201ENST00000623391 TERF2IPQ9NYB0 399 aa11.42□□□□□ -0.58
AP000542.3-201ENST00000623391 SYNJ2O15056 1496 aa11.42□□□□□ -0.58
AP000542.3-201ENST00000623391 RRBP1Q9P2E9 1410 aaKnown RBP11.42□□□□□ -0.58
AP000542.3-201ENST00000623391 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
AP000542.3-201ENST00000623391 U2SURPO15042 1029 aaKnown RBP11.41□□□□□ -0.58
AP000542.3-201ENST00000623391 L3MBTL2Q969R5 705 aa11.41□□□□□ -0.58
AP000542.3-201ENST00000623391 NCOA2Q15596 1464 aa11.41□□□□□ -0.58
AP000542.3-201ENST00000623391 BICRAQ9NZM4 1560 aa11.4□□□□□ -0.58
AP000542.3-201ENST00000623391 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
AP000542.3-201ENST00000623391 WASHC2CQ9Y4E1 1318 aa11.4□□□□□ -0.58
AP000542.3-201ENST00000623391 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
AP000542.3-201ENST00000623391 OSCARQ8IYS5 282 aa11.39□□□□□ -0.59
AP000542.3-201ENST00000623391 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
AP000542.3-201ENST00000623391 NLRP13Q86W25 1043 aa11.38□□□□□ -0.59
AP000542.3-201ENST00000623391 LAS1LQ9Y4W2 734 aaKnown RBP11.38□□□□□ -0.59
AP000542.3-201ENST00000623391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 AQRO60306 1485 aaKnown RBP eCLIP11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 FOXD1Q16676 465 aa11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 RTF1Q92541 710 aaKnown RBP11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 MYBBP1AQ9BQG0 1328 aaKnown RBP11.37□□□□□ -0.59
AP000542.3-201ENST00000623391 NGEFQ8N5V2 710 aa11.36□□□□□ -0.59
AP000542.3-201ENST00000623391 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
AP000542.3-201ENST00000623391 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
AP000542.3-201ENST00000623391 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
AP000542.3-201ENST00000623391 TIAM1Q13009 1591 aa11.35□□□□□ -0.59
AP000542.3-201ENST00000623391 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
AP000542.3-201ENST00000623391 MAP3K1Q13233 1512 aa11.35□□□□□ -0.59
AP000542.3-201ENST00000623391 MLECQ14165 292 aa11.34□□□□□ -0.59
AP000542.3-201ENST00000623391 FRAT1Q92837 279 aaPredicted RBP11.34□□□□□ -0.59
AP000542.3-201ENST00000623391 HDAC5Q9UQL6 1122 aa11.34□□□□□ -0.59
AP000542.3-201ENST00000623391 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.59
AP000542.3-201ENST00000623391 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
AP000542.3-201ENST00000623391 ARHGAP5Q13017 1502 aa11.33□□□□□ -0.6
AP000542.3-201ENST00000623391 PTMSP20962 102 aa11.32□□□□□ -0.6
AP000542.3-201ENST00000623391 MCCP23508 829 aa11.32□□□□□ -0.6
AP000542.3-201ENST00000623391 RCAN3Q9UKA8 241 aa11.32□□□□□ -0.6
AP000542.3-201ENST00000623391 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
AP000542.3-201ENST00000623391 USP47Q96K76 1375 aa11.32□□□□□ -0.6
AP000542.3-201ENST00000623391 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
AP000542.3-201ENST00000623391 EVC2Q86UK5 1308 aa11.31□□□□□ -0.6
AP000542.3-201ENST00000623391 RWDD1Q9H446 243 aaPredicted RBP11.31□□□□□ -0.6
AP000542.3-201ENST00000623391 ANKRD50Q9ULJ7 1429 aa11.31□□□□□ -0.6
AP000542.3-201ENST00000623391 STK26Q9P289 416 aa11.31□□□□□ -0.6
AP000542.3-201ENST00000623391 SNAPC4Q5SXM2 1469 aa11.3□□□□□ -0.6
AP000542.3-201ENST00000623391 SENP3Q9H4L4 574 aaPredicted RBP11.3□□□□□ -0.6
AP000542.3-201ENST00000623391 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
AP000542.3-201ENST00000623391 NBR1Q14596 966 aa11.3□□□□□ -0.6
AP000542.3-201ENST00000623391 HFM1A2PYH4 1435 aa11.3□□□□□ -0.6
AP000542.3-201ENST00000623391 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
AP000542.3-201ENST00000623391 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
AP000542.3-201ENST00000623391 TROQ12816 1431 aaPredicted RBP11.29□□□□□ -0.6
AP000542.3-201ENST00000623391 PRG4Q92954 1404 aaPredicted RBP11.29□□□□□ -0.6
AP000542.3-201ENST00000623391 CGNL1Q0VF96 1302 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms