RNA–Protein interactions for RNA: ENST00000622934.3

SMIM11B-203, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-203ENST00000622934 RIMS1Q86UR5 1692 aaKnown RBP13.36□□□□□ -0.27
SMIM11B-203ENST00000622934 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
SMIM11B-203ENST00000622934 SUPT5HO00267 1087 aaKnown RBP13.31□□□□□ -0.28
SMIM11B-203ENST00000622934 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
SMIM11B-203ENST00000622934 POGZQ7Z3K3 1410 aa13.3□□□□□ -0.28
SMIM11B-203ENST00000622934 NEO1Q92859 1461 aa13.29□□□□□ -0.28
SMIM11B-203ENST00000622934 ARHGEF40Q8TER5 1519 aa13.28□□□□□ -0.28
SMIM11B-203ENST00000622934 ABCA8O94911 1581 aa13.28□□□□□ -0.28
SMIM11B-203ENST00000622934 FANCAO15360 1455 aa13.26□□□□□ -0.29
SMIM11B-203ENST00000622934 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
SMIM11B-203ENST00000622934 ABCA9Q8IUA7 1624 aa13.25□□□□□ -0.29
SMIM11B-203ENST00000622934 FRMPD1Q5SYB0 1578 aa13.25□□□□□ -0.29
SMIM11B-203ENST00000622934 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
SMIM11B-203ENST00000622934 APLP2Q06481 763 aa13.25□□□□□ -0.29
SMIM11B-203ENST00000622934 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
SMIM11B-203ENST00000622934 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
SMIM11B-203ENST00000622934 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
SMIM11B-203ENST00000622934 PREX1Q8TCU6 1659 aa13.21□□□□□ -0.3
SMIM11B-203ENST00000622934 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
SMIM11B-203ENST00000622934 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
SMIM11B-203ENST00000622934 IQSEC2Q5JU85 1478 aa13.19□□□□□ -0.3
SMIM11B-203ENST00000622934 FER1L4A9Z1Z3 1794 aa13.19□□□□□ -0.3
SMIM11B-203ENST00000622934 ATP10BO94823 1461 aa13.16□□□□□ -0.3
SMIM11B-203ENST00000622934 PTPRTO14522 1441 aa13.16□□□□□ -0.3
SMIM11B-203ENST00000622934 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
SMIM11B-203ENST00000622934 MLECQ14165 292 aa13.16□□□□□ -0.3
SMIM11B-203ENST00000622934 STRCQ7RTU9 1775 aa13.16□□□□□ -0.3
SMIM11B-203ENST00000622934 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
SMIM11B-203ENST00000622934 FHOD3Q2V2M9 1422 aa13.15□□□□□ -0.3
SMIM11B-203ENST00000622934 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.3
SMIM11B-203ENST00000622934 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
SMIM11B-203ENST00000622934 UHRF1BP1Q6BDS2 1440 aa13.14□□□□□ -0.31
SMIM11B-203ENST00000622934 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
SMIM11B-203ENST00000622934 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
SMIM11B-203ENST00000622934 CFAP74Q9C0B2 1584 aa13.12□□□□□ -0.31
SMIM11B-203ENST00000622934 MAGI2Q86UL8 1455 aa13.12□□□□□ -0.31
SMIM11B-203ENST00000622934 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
SMIM11B-203ENST00000622934 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
SMIM11B-203ENST00000622934 ARHGEF12Q9NZN5 1544 aa13.09□□□□□ -0.31
SMIM11B-203ENST00000622934 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
SMIM11B-203ENST00000622934 UBAP1LF5GYI3 381 aa13.07□□□□□ -0.32
SMIM11B-203ENST00000622934 CEBPAP49715 358 aaPredicted RBP13.07□□□□□ -0.32
SMIM11B-203ENST00000622934 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
SMIM11B-203ENST00000622934 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
SMIM11B-203ENST00000622934 HECW1Q76N89 1606 aa13.04□□□□□ -0.32
SMIM11B-203ENST00000622934 C9orf84Q5VXU9 1444 aa13.04□□□□□ -0.32
SMIM11B-203ENST00000622934 ATP10AO60312 1499 aa13.04□□□□□ -0.32
SMIM11B-203ENST00000622934 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
SMIM11B-203ENST00000622934 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
SMIM11B-203ENST00000622934 RAPGEF6Q8TEU7 1601 aa13.02□□□□□ -0.32
SMIM11B-203ENST00000622934 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
SMIM11B-203ENST00000622934 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
SMIM11B-203ENST00000622934 NCOA1Q15788 1441 aa13□□□□□ -0.33
SMIM11B-203ENST00000622934 PROM2Q8N271 834 aa13□□□□□ -0.33
SMIM11B-203ENST00000622934 PLEKHD1A6NEE1 506 aa12.99□□□□□ -0.33
SMIM11B-203ENST00000622934 SCAPERQ9BY12 1400 aa12.97□□□□□ -0.33
SMIM11B-203ENST00000622934 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
SMIM11B-203ENST00000622934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMIM11B-203ENST00000622934 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
SMIM11B-203ENST00000622934 NUP153P49790 1475 aaKnown RBP12.96□□□□□ -0.34
SMIM11B-203ENST00000622934 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
SMIM11B-203ENST00000622934 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
SMIM11B-203ENST00000622934 C3P01024 1663 aa12.94□□□□□ -0.34
SMIM11B-203ENST00000622934 HSPA1LP34931 641 aa12.94□□□□□ -0.34
SMIM11B-203ENST00000622934 C1QBPQ07021 282 aaKnown RBP12.94□□□□□ -0.34
SMIM11B-203ENST00000622934 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
SMIM11B-203ENST00000622934 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
SMIM11B-203ENST00000622934 POLA2Q14181 598 aa12.91□□□□□ -0.34
SMIM11B-203ENST00000622934 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
SMIM11B-203ENST00000622934 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
SMIM11B-203ENST00000622934 PLCH2O75038 1416 aa12.89□□□□□ -0.35
SMIM11B-203ENST00000622934 TOM1O60784 492 aa12.89□□□□□ -0.35
SMIM11B-203ENST00000622934 PIP4K2BP78356 416 aa12.89□□□□□ -0.35
SMIM11B-203ENST00000622934 MYT1LQ9UL68 1186 aa12.89□□□□□ -0.35
SMIM11B-203ENST00000622934 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
SMIM11B-203ENST00000622934 PKD2Q13563 968 aa12.88□□□□□ -0.35
SMIM11B-203ENST00000622934 EFCAB2Q5VUJ9 269 aa12.88□□□□□ -0.35
SMIM11B-203ENST00000622934 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
SMIM11B-203ENST00000622934 REREQ9P2R6 1566 aa12.87□□□□□ -0.35
SMIM11B-203ENST00000622934 AGLP35573 1532 aa12.87□□□□□ -0.35
SMIM11B-203ENST00000622934 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
SMIM11B-203ENST00000622934 NPATQ14207 1427 aa12.86□□□□□ -0.35
SMIM11B-203ENST00000622934 CAPN15O75808 1086 aa12.85□□□□□ -0.35
SMIM11B-203ENST00000622934 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
SMIM11B-203ENST00000622934 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
SMIM11B-203ENST00000622934 KDM5CP41229 1560 aa12.84□□□□□ -0.35
SMIM11B-203ENST00000622934 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
SMIM11B-203ENST00000622934 AFAP1Q8N556 730 aa12.81□□□□□ -0.36
SMIM11B-203ENST00000622934 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
SMIM11B-203ENST00000622934 CPS1P31327 1500 aa12.8□□□□□ -0.36
SMIM11B-203ENST00000622934 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
SMIM11B-203ENST00000622934 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
SMIM11B-203ENST00000622934 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
SMIM11B-203ENST00000622934 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
SMIM11B-203ENST00000622934 ZNF142P52746 1687 aaPredicted RBP12.79□□□□□ -0.36
SMIM11B-203ENST00000622934 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
SMIM11B-203ENST00000622934 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
SMIM11B-203ENST00000622934 CEP170BQ9Y4F5 1589 aaPredicted RBP12.77□□□□□ -0.37
SMIM11B-203ENST00000622934 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
SMIM11B-203ENST00000622934 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms