RNA–Protein interactions for RNA: ENST00000621189.4

RECQL4-210, Transcript of RecQ like helicase 4, humanhuman

TSL 1 (best) BASIC

Gene RECQL4, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-210ENST00000621189 NCOA2Q15596 1464 aa22.11■■□□□ 1.13
RECQL4-210ENST00000621189 MAPKBP1O60336 1514 aa22.1■■□□□ 1.13
RECQL4-210ENST00000621189 NEFMP07197 916 aa22.1■■□□□ 1.13
RECQL4-210ENST00000621189 MYOM3Q5VTT5 1437 aa22.1■■□□□ 1.13
RECQL4-210ENST00000621189 CCDC7Q96M83 1385 aa22.09■■□□□ 1.13
RECQL4-210ENST00000621189 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
RECQL4-210ENST00000621189 EXOC6Q8TAG9 804 aa22.07■■□□□ 1.12
RECQL4-210ENST00000621189 CASKIN1Q8WXD9 1431 aa22.07■■□□□ 1.12
RECQL4-210ENST00000621189 RCAN3Q9UKA8 241 aa22.06■■□□□ 1.12
RECQL4-210ENST00000621189 ZBED9Q6R2W3 1325 aa22.05■■□□□ 1.12
RECQL4-210ENST00000621189 KNSTRNQ9Y448 316 aa22.04■■□□□ 1.12
RECQL4-210ENST00000621189 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.124e-7■■■■□ 25.3
RECQL4-210ENST00000621189 PCF11O94913 1555 aaKnown RBP22.02■■□□□ 1.12
RECQL4-210ENST00000621189 USP47Q96K76 1375 aa22.01■■□□□ 1.11
RECQL4-210ENST00000621189 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
RECQL4-210ENST00000621189 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
RECQL4-210ENST00000621189 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
RECQL4-210ENST00000621189 SLC4A3P48751 1232 aa22■■□□□ 1.11
RECQL4-210ENST00000621189 NAIPQ13075 1403 aa21.99■■□□□ 1.11
RECQL4-210ENST00000621189 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
RECQL4-210ENST00000621189 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
RECQL4-210ENST00000621189 FRAT1Q92837 279 aaPredicted RBP21.97■■□□□ 1.11
RECQL4-210ENST00000621189 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
RECQL4-210ENST00000621189 CNTLNQ9NXG0 1405 aa21.97■■□□□ 1.11
RECQL4-210ENST00000621189 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
RECQL4-210ENST00000621189 HFM1A2PYH4 1435 aa21.95■■□□□ 1.1
RECQL4-210ENST00000621189 SKAP1Q86WV1 359 aa21.94■■□□□ 1.1
RECQL4-210ENST00000621189 CCDC146Q8IYE0 955 aa21.94■■□□□ 1.1
RECQL4-210ENST00000621189 CDCA7LQ96GN5 454 aa21.94■■□□□ 1.1
RECQL4-210ENST00000621189 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
RECQL4-210ENST00000621189 FYCO1Q9BQS8 1478 aa21.93■■□□□ 1.1
RECQL4-210ENST00000621189 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
RECQL4-210ENST00000621189 IPO9Q96P70 1041 aaKnown RBP21.92■■□□□ 1.1
RECQL4-210ENST00000621189 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.91■■□□□ 1.1
RECQL4-210ENST00000621189 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
RECQL4-210ENST00000621189 ANKRD30AQ9BXX3 1397 aa21.89■■□□□ 1.09
RECQL4-210ENST00000621189 PANK3Q9H999 370 aa21.89■■□□□ 1.09
RECQL4-210ENST00000621189 KTN1Q86UP2 1357 aaKnown RBP21.88■■□□□ 1.09
RECQL4-210ENST00000621189 TMF1P82094 1093 aa21.88■■□□□ 1.09
RECQL4-210ENST00000621189 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
RECQL4-210ENST00000621189 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
RECQL4-210ENST00000621189 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
RECQL4-210ENST00000621189 NLRP13Q86W25 1043 aa21.84■■□□□ 1.09
RECQL4-210ENST00000621189 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
RECQL4-210ENST00000621189 RRP1P56182 461 aaKnown RBP21.84■■□□□ 1.09
RECQL4-210ENST00000621189 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
RECQL4-210ENST00000621189 CDK13Q14004 1512 aaKnown RBP21.84■■□□□ 1.09
RECQL4-210ENST00000621189 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
RECQL4-210ENST00000621189 SPRYD3Q8NCJ5 442 aa21.83■■□□□ 1.09
RECQL4-210ENST00000621189 CRBNQ96SW2 442 aa21.83■■□□□ 1.09
RECQL4-210ENST00000621189 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.83■■□□□ 1.08
RECQL4-210ENST00000621189 PDE4AP27815 886 aa21.82■■□□□ 1.08
RECQL4-210ENST00000621189 RALBP1Q15311 655 aa21.82■■□□□ 1.08
RECQL4-210ENST00000621189 MYBBP1AQ9BQG0 1328 aaKnown RBP21.81■■□□□ 1.08
RECQL4-210ENST00000621189 SLC24A1O60721 1099 aa21.78■■□□□ 1.08
RECQL4-210ENST00000621189 PPM1GO15355 546 aaPredicted RBP21.77■■□□□ 1.07
RECQL4-210ENST00000621189 PRG4Q92954 1404 aaPredicted RBP21.76■■□□□ 1.07
RECQL4-210ENST00000621189 KIF15Q9NS87 1388 aa21.76■■□□□ 1.07
RECQL4-210ENST00000621189 PNISRQ8TF01 805 aaKnown RBP21.76■■□□□ 1.07
RECQL4-210ENST00000621189 NUTM2DQ5VT03 806 aaPredicted RBP21.75■■□□□ 1.07
RECQL4-210ENST00000621189 UPF2Q9HAU5 1272 aaKnown RBP21.75■■□□□ 1.07
RECQL4-210ENST00000621189 RRP7AQ9Y3A4 280 aaKnown RBP21.75■■□□□ 1.07
RECQL4-210ENST00000621189 TCERG1O14776 1098 aaKnown RBP21.74■■□□□ 1.07
RECQL4-210ENST00000621189 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
RECQL4-210ENST00000621189 DDRGK1Q96HY6 314 aa21.74■■□□□ 1.07
RECQL4-210ENST00000621189 CLUAP1Q96AJ1 413 aa21.74■■□□□ 1.07
RECQL4-210ENST00000621189 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
RECQL4-210ENST00000621189 CC2D2AQ9P2K1 1620 aa21.72■■□□□ 1.07
RECQL4-210ENST00000621189 BCL2L13Q9BXK5 485 aa21.72■■□□□ 1.07
RECQL4-210ENST00000621189 SLKQ9H2G2 1235 aaPredicted RBP21.72■■□□□ 1.07
RECQL4-210ENST00000621189 HSP90AA1P07900 732 aaKnown RBP21.69■■□□□ 1.06
RECQL4-210ENST00000621189 ANKRD50Q9ULJ7 1429 aa21.67■■□□□ 1.06
RECQL4-210ENST00000621189 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
RECQL4-210ENST00000621189 EFCAB5A4FU69 1503 aa21.67■■□□□ 1.06
RECQL4-210ENST00000621189 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
RECQL4-210ENST00000621189 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
RECQL4-210ENST00000621189 ADAMTS8Q9UP79 889 aa21.66■■□□□ 1.06
RECQL4-210ENST00000621189 CARMIL2Q6F5E8 1435 aa21.66■■□□□ 1.06
RECQL4-210ENST00000621189 APAF1O14727 1248 aa21.65■■□□□ 1.06
RECQL4-210ENST00000621189 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
RECQL4-210ENST00000621189 PTPN23Q9H3S7 1636 aa21.65■■□□□ 1.06
RECQL4-210ENST00000621189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.65■■□□□ 1.062e-7■■□□□ 13.2
RECQL4-210ENST00000621189 GOLGA2Q08379 1002 aa21.64■■□□□ 1.06
RECQL4-210ENST00000621189 CCDC144AA2RUR9 1427 aa21.64■■□□□ 1.05
RECQL4-210ENST00000621189 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
RECQL4-210ENST00000621189 CDCA8Q53HL2 280 aa21.63■■□□□ 1.05
RECQL4-210ENST00000621189 GGT6Q6P531 493 aa21.63■■□□□ 1.05
RECQL4-210ENST00000621189 EPRSP07814 1512 aaKnown RBP21.62■■□□□ 1.05
RECQL4-210ENST00000621189 DAPK1P53355 1430 aa21.62■■□□□ 1.05
RECQL4-210ENST00000621189 KIF3BO15066 747 aa21.61■■□□□ 1.05
RECQL4-210ENST00000621189 STK26Q9P289 416 aa21.61■■□□□ 1.05
RECQL4-210ENST00000621189 MORC1Q86VD1 984 aa21.6■■□□□ 1.05
RECQL4-210ENST00000621189 FTSJ3Q8IY81 847 aaKnown RBP21.6■■□□□ 1.05
RECQL4-210ENST00000621189 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
RECQL4-210ENST00000621189 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
RECQL4-210ENST00000621189 NCOA1Q15788 1441 aa21.57■■□□□ 1.04
RECQL4-210ENST00000621189 C20orf194Q5TEA3 1177 aa21.57■■□□□ 1.04
RECQL4-210ENST00000621189 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
RECQL4-210ENST00000621189 COG6Q9Y2V7 657 aa21.57■■□□□ 1.04
RECQL4-210ENST00000621189 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms