RNA–Protein interactions for RNA: ENST00000621128.4

NCAM1-228, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-228ENST00000621128 UPF2Q9HAU5 1272 aaKnown RBP12.23□□□□□ -0.45
NCAM1-228ENST00000621128 NESP48681 1621 aa12.23□□□□□ -0.45
NCAM1-228ENST00000621128 ROCK2O75116 1388 aaKnown RBP12.23□□□□□ -0.45
NCAM1-228ENST00000621128 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.45
NCAM1-228ENST00000621128 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
NCAM1-228ENST00000621128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
NCAM1-228ENST00000621128 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
NCAM1-228ENST00000621128 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.45
NCAM1-228ENST00000621128 RALBP1Q15311 655 aa12.21□□□□□ -0.45
NCAM1-228ENST00000621128 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.45
NCAM1-228ENST00000621128 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
NCAM1-228ENST00000621128 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
NCAM1-228ENST00000621128 KTN1Q86UP2 1357 aaKnown RBP12.19□□□□□ -0.46
NCAM1-228ENST00000621128 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
NCAM1-228ENST00000621128 EHBP1L1Q8N3D4 1523 aa12.18□□□□□ -0.46
NCAM1-228ENST00000621128 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
NCAM1-228ENST00000621128 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
NCAM1-228ENST00000621128 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
NCAM1-228ENST00000621128 CUL7Q14999 1698 aa12.14□□□□□ -0.47
NCAM1-228ENST00000621128 NUDCQ9Y266 331 aa12.14□□□□□ -0.47
NCAM1-228ENST00000621128 CCDC144AA2RUR9 1427 aa12.14□□□□□ -0.47
NCAM1-228ENST00000621128 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
NCAM1-228ENST00000621128 EIF3AQ14152 1382 aaKnown RBP12.12□□□□□ -0.47
NCAM1-228ENST00000621128 DDRGK1Q96HY6 314 aa12.12□□□□□ -0.47
NCAM1-228ENST00000621128 POGKQ9P215 609 aa12.12□□□□□ -0.47
NCAM1-228ENST00000621128 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
NCAM1-228ENST00000621128 KIF3BO15066 747 aa12.1□□□□□ -0.47
NCAM1-228ENST00000621128 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
NCAM1-228ENST00000621128 KIF15Q9NS87 1388 aa12.1□□□□□ -0.47
NCAM1-228ENST00000621128 ARID4BQ4LE39 1312 aaPredicted RBP12.1□□□□□ -0.47
NCAM1-228ENST00000621128 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
NCAM1-228ENST00000621128 GGT6Q6P531 493 aa12.09□□□□□ -0.47
NCAM1-228ENST00000621128 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
NCAM1-228ENST00000621128 PNNQ9H307 717 aaKnown RBP12.09□□□□□ -0.47
NCAM1-228ENST00000621128 ANKRD50Q9ULJ7 1429 aa12.09□□□□□ -0.47
NCAM1-228ENST00000621128 USP47Q96K76 1375 aa12.09□□□□□ -0.47
NCAM1-228ENST00000621128 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
NCAM1-228ENST00000621128 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
NCAM1-228ENST00000621128 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
NCAM1-228ENST00000621128 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
NCAM1-228ENST00000621128 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
NCAM1-228ENST00000621128 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
NCAM1-228ENST00000621128 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
NCAM1-228ENST00000621128 MS4A1P11836 297 aa12.07□□□□□ -0.48
NCAM1-228ENST00000621128 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
NCAM1-228ENST00000621128 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
NCAM1-228ENST00000621128 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
NCAM1-228ENST00000621128 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
NCAM1-228ENST00000621128 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
NCAM1-228ENST00000621128 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
NCAM1-228ENST00000621128 MORC1Q86VD1 984 aa12.06□□□□□ -0.48
NCAM1-228ENST00000621128 SYNJ2O15056 1496 aa12.06□□□□□ -0.48
NCAM1-228ENST00000621128 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
NCAM1-228ENST00000621128 MYBBP1AQ9BQG0 1328 aaKnown RBP12.05□□□□□ -0.48
NCAM1-228ENST00000621128 HSP90AA1P07900 732 aaKnown RBP12.05□□□□□ -0.48
NCAM1-228ENST00000621128 ANP32EQ9BTT0 268 aa12.05□□□□□ -0.48
NCAM1-228ENST00000621128 PLPPR3Q6T4P5 718 aa12.05□□□□□ -0.48
NCAM1-228ENST00000621128 CCDC7Q96M83 1385 aa12.04□□□□□ -0.48
NCAM1-228ENST00000621128 SNAPC4Q5SXM2 1469 aa12.04□□□□□ -0.48
NCAM1-228ENST00000621128 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
NCAM1-228ENST00000621128 EPRSP07814 1512 aaKnown RBP12.03□□□□□ -0.48
NCAM1-228ENST00000621128 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
NCAM1-228ENST00000621128 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
NCAM1-228ENST00000621128 BECN1Q14457 450 aa12.03□□□□□ -0.48
NCAM1-228ENST00000621128 ZBED9Q6R2W3 1325 aa12.02□□□□□ -0.48
NCAM1-228ENST00000621128 NEUROD2Q15784 382 aa12.02□□□□□ -0.48
NCAM1-228ENST00000621128 ROCK1Q13464 1354 aa12.02□□□□□ -0.49
NCAM1-228ENST00000621128 FTSJ3Q8IY81 847 aaKnown RBP12.02□□□□□ -0.49
NCAM1-228ENST00000621128 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
NCAM1-228ENST00000621128 NAIPQ13075 1403 aa12.01□□□□□ -0.49
NCAM1-228ENST00000621128 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
NCAM1-228ENST00000621128 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
NCAM1-228ENST00000621128 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
NCAM1-228ENST00000621128 SENP3Q9H4L4 574 aaPredicted RBP12.01□□□□□ -0.49
NCAM1-228ENST00000621128 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
NCAM1-228ENST00000621128 TNNT2P45379 298 aaPredicted RBP12□□□□□ -0.49
NCAM1-228ENST00000621128 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
NCAM1-228ENST00000621128 NBR1Q14596 966 aa11.99□□□□□ -0.49
NCAM1-228ENST00000621128 WASHC2CQ9Y4E1 1318 aa11.99□□□□□ -0.49
NCAM1-228ENST00000621128 DAPK1P53355 1430 aa11.99□□□□□ -0.49
NCAM1-228ENST00000621128 KIF7Q2M1P5 1343 aa11.99□□□□□ -0.49
NCAM1-228ENST00000621128 PPM1GO15355 546 aaPredicted RBP11.99□□□□□ -0.49
NCAM1-228ENST00000621128 U2SURPO15042 1029 aaKnown RBP11.99□□□□□ -0.49
NCAM1-228ENST00000621128 PLEKHH2Q8IVE3 1493 aa11.99□□□□□ -0.49
NCAM1-228ENST00000621128 KIAA1107Q9UPP5 1409 aa11.98□□□□□ -0.49
NCAM1-228ENST00000621128 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
NCAM1-228ENST00000621128 WASHC2AQ641Q2 1341 aa11.97□□□□□ -0.49
NCAM1-228ENST00000621128 C9orf84Q5VXU9 1444 aa11.97□□□□□ -0.49
NCAM1-228ENST00000621128 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
NCAM1-228ENST00000621128 PANK3Q9H999 370 aa11.96□□□□□ -0.49
NCAM1-228ENST00000621128 TSHZ2Q9NRE2 1034 aa11.96□□□□□ -0.49
NCAM1-228ENST00000621128 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.5
NCAM1-228ENST00000621128 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
NCAM1-228ENST00000621128 NOP58Q9Y2X3 529 aaKnown RBP11.95□□□□□ -0.5
NCAM1-228ENST00000621128 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
NCAM1-228ENST00000621128 TCERG1O14776 1098 aaKnown RBP11.95□□□□□ -0.5
NCAM1-228ENST00000621128 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
NCAM1-228ENST00000621128 ARHGAP5Q13017 1502 aa11.94□□□□□ -0.5
NCAM1-228ENST00000621128 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
NCAM1-228ENST00000621128 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms