RNA–Protein interactions for RNA: ENST00000620941.1

SRSF3-208, Transcript of serine and arginine rich splicing factor 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SRSF3, Length 869 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-208ENST00000620941 RANGAP1P46060 587 aaPredicted RBP22.81■■□□□ 1.24
SRSF3-208ENST00000620941 SCAPERQ9BY12 1400 aa22.81■■□□□ 1.24
SRSF3-208ENST00000620941 PREX1Q8TCU6 1659 aa22.81■■□□□ 1.24
SRSF3-208ENST00000620941 ATP10AO60312 1499 aa22.8■■□□□ 1.24
SRSF3-208ENST00000620941 SAMD9Q5K651 1589 aa22.79■■□□□ 1.24
SRSF3-208ENST00000620941 HECW1Q76N89 1606 aa22.78■■□□□ 1.24
SRSF3-208ENST00000620941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.77■■□□□ 1.241e-7■□□□□ 9.1
SRSF3-208ENST00000620941 C9orf84Q5VXU9 1444 aa22.77■■□□□ 1.24
SRSF3-208ENST00000620941 ARHGEF12Q9NZN5 1544 aa22.77■■□□□ 1.24
SRSF3-208ENST00000620941 PTPRTO14522 1441 aa22.76■■□□□ 1.23
SRSF3-208ENST00000620941 SIGLEC1Q9BZZ2 1709 aa22.75■■□□□ 1.23
SRSF3-208ENST00000620941 ESF1Q9H501 851 aaKnown RBP22.75■■□□□ 1.23
SRSF3-208ENST00000620941 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
SRSF3-208ENST00000620941 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
SRSF3-208ENST00000620941 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
SRSF3-208ENST00000620941 STRCQ7RTU9 1775 aa22.72■■□□□ 1.23
SRSF3-208ENST00000620941 PLCH2O75038 1416 aa22.72■■□□□ 1.23
SRSF3-208ENST00000620941 SETD1BQ9UPS6 1966 aaKnown RBP22.7■■□□□ 1.23
SRSF3-208ENST00000620941 IQSEC2Q5JU85 1478 aa22.68■■□□□ 1.22
SRSF3-208ENST00000620941 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
SRSF3-208ENST00000620941 UBAP1LF5GYI3 381 aa22.62■■□□□ 1.21
SRSF3-208ENST00000620941 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
SRSF3-208ENST00000620941 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
SRSF3-208ENST00000620941 LTBP4Q8N2S1 1624 aa22.6■■□□□ 1.21
SRSF3-208ENST00000620941 ZNF518AQ6AHZ1 1483 aa22.6■■□□□ 1.21
SRSF3-208ENST00000620941 TRAPPC8Q9Y2L5 1435 aa22.6■■□□□ 1.21
SRSF3-208ENST00000620941 NCOA1Q15788 1441 aa22.55■■□□□ 1.2
SRSF3-208ENST00000620941 CDK13Q14004 1512 aaKnown RBP22.52■■□□□ 1.2
SRSF3-208ENST00000620941 CNTLNQ9NXG0 1405 aa22.5■■□□□ 1.19
SRSF3-208ENST00000620941 ZNF335Q9H4Z2 1342 aaPredicted RBP22.49■■□□□ 1.19
SRSF3-208ENST00000620941 C3P01024 1663 aa22.49■■□□□ 1.19
SRSF3-208ENST00000620941 ARHGAP5Q13017 1502 aa22.48■■□□□ 1.19
SRSF3-208ENST00000620941 MYO5CQ9NQX4 1742 aa22.47■■□□□ 1.19
SRSF3-208ENST00000620941 NCKAP5LQ9HCH0 1330 aa22.47■■□□□ 1.19
SRSF3-208ENST00000620941 KDM5CP41229 1560 aa22.46■■□□□ 1.19
SRSF3-208ENST00000620941 REREQ9P2R6 1566 aa22.46■■□□□ 1.19
SRSF3-208ENST00000620941 PKD2Q13563 968 aa22.45■■□□□ 1.18
SRSF3-208ENST00000620941 MLH3Q9UHC1 1453 aa22.45■■□□□ 1.18
SRSF3-208ENST00000620941 AGLP35573 1532 aa22.45■■□□□ 1.18
SRSF3-208ENST00000620941 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
SRSF3-208ENST00000620941 DIP2CQ9Y2E4 1556 aa22.44■■□□□ 1.18
SRSF3-208ENST00000620941 CAMSAP1Q5T5Y3 1602 aa22.43■■□□□ 1.18
SRSF3-208ENST00000620941 CLIP1P30622 1438 aa22.42■■□□□ 1.18
SRSF3-208ENST00000620941 NPATQ14207 1427 aa22.42■■□□□ 1.18
SRSF3-208ENST00000620941 EEA1Q15075 1411 aa22.42■■□□□ 1.18
SRSF3-208ENST00000620941 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
SRSF3-208ENST00000620941 KIF14Q15058 1648 aa22.39■■□□□ 1.17
SRSF3-208ENST00000620941 ZMYM3Q14202 1370 aa22.38■■□□□ 1.17
SRSF3-208ENST00000620941 TOM1O60784 492 aa22.38■■□□□ 1.17
SRSF3-208ENST00000620941 PIP4K2BP78356 416 aa22.38■■□□□ 1.17
SRSF3-208ENST00000620941 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
SRSF3-208ENST00000620941 TROQ12816 1431 aaPredicted RBP22.38■■□□□ 1.17
SRSF3-208ENST00000620941 HSPA1LP34931 641 aa22.37■■□□□ 1.17
SRSF3-208ENST00000620941 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
SRSF3-208ENST00000620941 ABCA6Q8N139 1617 aa22.35■■□□□ 1.17
SRSF3-208ENST00000620941 PLA2R1Q13018 1463 aa22.32■■□□□ 1.16
SRSF3-208ENST00000620941 UBTFP17480 764 aaKnown RBP22.3■■□□□ 1.16
SRSF3-208ENST00000620941 MED1Q15648 1581 aaPredicted RBP22.29■■□□□ 1.16
SRSF3-208ENST00000620941 ZNF777Q9ULD5 760 aaPredicted RBP22.25■■□□□ 1.15
SRSF3-208ENST00000620941 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
SRSF3-208ENST00000620941 MROH2AA6NES4 1674 aa22.25■■□□□ 1.15
SRSF3-208ENST00000620941 SPAG9O60271 1321 aaKnown RBP22.25■■□□□ 1.15
SRSF3-208ENST00000620941 ABCC1P33527 1531 aa22.24■■□□□ 1.15
SRSF3-208ENST00000620941 GGT6Q6P531 493 aa22.23■■□□□ 1.15
SRSF3-208ENST00000620941 CDC42BPBQ9Y5S2 1711 aa22.21■■□□□ 1.15
SRSF3-208ENST00000620941 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
SRSF3-208ENST00000620941 KIDINS220Q9ULH0 1771 aa22.2■■□□□ 1.14
SRSF3-208ENST00000620941 PTPRKQ15262 1439 aa22.2■■□□□ 1.14
SRSF3-208ENST00000620941 CEP170BQ9Y4F5 1589 aaPredicted RBP22.2■■□□□ 1.14
SRSF3-208ENST00000620941 CPS1P31327 1500 aa22.18■■□□□ 1.14
SRSF3-208ENST00000620941 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
SRSF3-208ENST00000620941 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
SRSF3-208ENST00000620941 PREX2Q70Z35 1606 aa22.17■■□□□ 1.14
SRSF3-208ENST00000620941 MYO3AQ8NEV4 1616 aa22.17■■□□□ 1.14
SRSF3-208ENST00000620941 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
SRSF3-208ENST00000620941 HNRNPMP52272 730 aaKnown RBP eCLIP22.16■■□□□ 1.14
SRSF3-208ENST00000620941 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
SRSF3-208ENST00000620941 SHANK2Q9UPX8 1470 aa22.14■■□□□ 1.13
SRSF3-208ENST00000620941 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
SRSF3-208ENST00000620941 CLTCQ00610 1675 aaKnown RBP22.13■■□□□ 1.13
SRSF3-208ENST00000620941 A2ML1A8K2U0 1454 aa22.12■■□□□ 1.13
SRSF3-208ENST00000620941 ANKLE2Q86XL3 938 aa22.12■■□□□ 1.13
SRSF3-208ENST00000620941 A2MP01023 1474 aa22.11■■□□□ 1.13
SRSF3-208ENST00000620941 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
SRSF3-208ENST00000620941 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
SRSF3-208ENST00000620941 THEMISQ8N1K5 641 aaPredicted RBP22.07■■□□□ 1.12
SRSF3-208ENST00000620941 CFDP1Q9UEE9 299 aaPredicted RBP22.07■■□□□ 1.12
SRSF3-208ENST00000620941 ATP7AQ04656 1500 aa22.06■■□□□ 1.12
SRSF3-208ENST00000620941 DNMT1P26358 1616 aaKnown RBP22.05■■□□□ 1.12
SRSF3-208ENST00000620941 SYCP2Q9BX26 1530 aa22.05■■□□□ 1.12
SRSF3-208ENST00000620941 KIAA1107Q9UPP5 1409 aa22.05■■□□□ 1.12
SRSF3-208ENST00000620941 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
SRSF3-208ENST00000620941 TNRQ92752 1358 aa22.03■■□□□ 1.12
SRSF3-208ENST00000620941 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.12
SRSF3-208ENST00000620941 CDC42BPAQ5VT25 1732 aa22.01■■□□□ 1.11
SRSF3-208ENST00000620941 PLXNC1O60486 1568 aa22.01■■□□□ 1.11
SRSF3-208ENST00000620941 FBXO31Q5XUX0 539 aaPredicted RBP22.01■■□□□ 1.11
SRSF3-208ENST00000620941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22■■□□□ 1.11
SRSF3-208ENST00000620941 GPATCH8Q9UKJ3 1502 aaKnown RBP22■■□□□ 1.11
SRSF3-208ENST00000620941 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms