RNA–Protein interactions for RNA: ENST00000619172.4

LINC01660-204, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 5 BASIC

Gene LINC01660, Length 3,572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-204ENST00000619172 AKNAQ7Z591 1439 aa12.6□□□□□ -0.39
LINC01660-204ENST00000619172 SKAP1Q86WV1 359 aa12.59□□□□□ -0.39
LINC01660-204ENST00000619172 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
LINC01660-204ENST00000619172 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
LINC01660-204ENST00000619172 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
LINC01660-204ENST00000619172 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
LINC01660-204ENST00000619172 NEFMP07197 916 aa12.59□□□□□ -0.39
LINC01660-204ENST00000619172 KCNA4P22459 653 aa12.58□□□□□ -0.4
LINC01660-204ENST00000619172 NEUROD2Q15784 382 aa12.58□□□□□ -0.4
LINC01660-204ENST00000619172 CCDC7Q96M83 1385 aa12.58□□□□□ -0.4
LINC01660-204ENST00000619172 EXOC6Q8TAG9 804 aa12.58□□□□□ -0.4
LINC01660-204ENST00000619172 PCF11O94913 1555 aaKnown RBP12.57□□□□□ -0.4
LINC01660-204ENST00000619172 SLC4A3P48751 1232 aa12.57□□□□□ -0.4
LINC01660-204ENST00000619172 NUDCQ9Y266 331 aa12.57□□□□□ -0.4
LINC01660-204ENST00000619172 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
LINC01660-204ENST00000619172 TNNT2P45379 298 aaPredicted RBP12.56□□□□□ -0.4
LINC01660-204ENST00000619172 HNRNPMP52272 730 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01660-204ENST00000619172 MYOM3Q5VTT5 1437 aa12.56□□□□□ -0.4
LINC01660-204ENST00000619172 ZBED9Q6R2W3 1325 aa12.56□□□□□ -0.4
LINC01660-204ENST00000619172 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01660-204ENST00000619172 NUP155O75694 1391 aa12.56□□□□□ -0.4
LINC01660-204ENST00000619172 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
LINC01660-204ENST00000619172 NAIPQ13075 1403 aa12.55□□□□□ -0.4
LINC01660-204ENST00000619172 CASKIN1Q8WXD9 1431 aa12.55□□□□□ -0.4
LINC01660-204ENST00000619172 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01660-204ENST00000619172 RCAN3Q9UKA8 241 aa12.54□□□□□ -0.4
LINC01660-204ENST00000619172 PEG3Q9GZU2 1588 aa12.53□□□□□ -0.4
LINC01660-204ENST00000619172 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
LINC01660-204ENST00000619172 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
LINC01660-204ENST00000619172 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
LINC01660-204ENST00000619172 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
LINC01660-204ENST00000619172 USP47Q96K76 1375 aa12.52□□□□□ -0.41
LINC01660-204ENST00000619172 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
LINC01660-204ENST00000619172 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
LINC01660-204ENST00000619172 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
LINC01660-204ENST00000619172 IPO9Q96P70 1041 aaKnown RBP12.5□□□□□ -0.41
LINC01660-204ENST00000619172 GAPVD1Q14C86 1478 aa12.49□□□□□ -0.41
LINC01660-204ENST00000619172 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
LINC01660-204ENST00000619172 FYCO1Q9BQS8 1478 aa12.48□□□□□ -0.41
LINC01660-204ENST00000619172 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
LINC01660-204ENST00000619172 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
LINC01660-204ENST00000619172 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
LINC01660-204ENST00000619172 KNSTRNQ9Y448 316 aa12.46□□□□□ -0.41
LINC01660-204ENST00000619172 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
LINC01660-204ENST00000619172 CDK13Q14004 1512 aaKnown RBP12.45□□□□□ -0.42
LINC01660-204ENST00000619172 ERICH6BQ5W0A0 696 aa12.45□□□□□ -0.42
LINC01660-204ENST00000619172 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
LINC01660-204ENST00000619172 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
LINC01660-204ENST00000619172 PDE4AP27815 886 aa12.43□□□□□ -0.42
LINC01660-204ENST00000619172 PANK3Q9H999 370 aa12.43□□□□□ -0.42
LINC01660-204ENST00000619172 RRP1P56182 461 aaKnown RBP12.43□□□□□ -0.42
LINC01660-204ENST00000619172 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
LINC01660-204ENST00000619172 PODXL2Q9NZ53 605 aa12.43□□□□□ -0.42
LINC01660-204ENST00000619172 CRBNQ96SW2 442 aa12.42□□□□□ -0.42
LINC01660-204ENST00000619172 AEBP2Q6ZN18 517 aaPredicted RBP12.41□□□□□ -0.42
LINC01660-204ENST00000619172 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
LINC01660-204ENST00000619172 HMGXB3Q12766 1538 aa12.41□□□□□ -0.42
LINC01660-204ENST00000619172 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
LINC01660-204ENST00000619172 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
LINC01660-204ENST00000619172 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
LINC01660-204ENST00000619172 ANKRD30AQ9BXX3 1397 aa12.38□□□□□ -0.43
LINC01660-204ENST00000619172 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
LINC01660-204ENST00000619172 MYBBP1AQ9BQG0 1328 aaKnown RBP12.38□□□□□ -0.43
LINC01660-204ENST00000619172 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01660-204ENST00000619172 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
LINC01660-204ENST00000619172 TMF1P82094 1093 aa12.37□□□□□ -0.43
LINC01660-204ENST00000619172 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
LINC01660-204ENST00000619172 RALBP1Q15311 655 aa12.36□□□□□ -0.43
LINC01660-204ENST00000619172 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
LINC01660-204ENST00000619172 SLKQ9H2G2 1235 aaPredicted RBP12.36□□□□□ -0.43
LINC01660-204ENST00000619172 RRP7AQ9Y3A4 280 aaKnown RBP12.36□□□□□ -0.43
LINC01660-204ENST00000619172 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
LINC01660-204ENST00000619172 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
LINC01660-204ENST00000619172 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
LINC01660-204ENST00000619172 NUTM2DQ5VT03 806 aaPredicted RBP12.35□□□□□ -0.43
LINC01660-204ENST00000619172 ANKRD30BQ9BXX2 1392 aa12.35□□□□□ -0.43
LINC01660-204ENST00000619172 KIF15Q9NS87 1388 aa12.35□□□□□ -0.43
LINC01660-204ENST00000619172 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
LINC01660-204ENST00000619172 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
LINC01660-204ENST00000619172 C20orf194Q5TEA3 1177 aa12.33□□□□□ -0.44
LINC01660-204ENST00000619172 MAP3K1Q13233 1512 aa12.32□□□□□ -0.44
LINC01660-204ENST00000619172 NCOA1Q15788 1441 aa12.32□□□□□ -0.44
LINC01660-204ENST00000619172 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
LINC01660-204ENST00000619172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC01660-204ENST00000619172 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
LINC01660-204ENST00000619172 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
LINC01660-204ENST00000619172 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
LINC01660-204ENST00000619172 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
LINC01660-204ENST00000619172 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
LINC01660-204ENST00000619172 APAF1O14727 1248 aa12.3□□□□□ -0.44
LINC01660-204ENST00000619172 DAPK1P53355 1430 aa12.3□□□□□ -0.44
LINC01660-204ENST00000619172 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
LINC01660-204ENST00000619172 DDRGK1Q96HY6 314 aa12.3□□□□□ -0.44
LINC01660-204ENST00000619172 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
LINC01660-204ENST00000619172 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
LINC01660-204ENST00000619172 ABCC5O15440 1437 aa12.28□□□□□ -0.44
LINC01660-204ENST00000619172 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
LINC01660-204ENST00000619172 UPF2Q9HAU5 1272 aaKnown RBP12.28□□□□□ -0.44
LINC01660-204ENST00000619172 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.44
LINC01660-204ENST00000619172 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms