RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 PAK3O75914 559 aaPredicted RBP21.18■□□□□ 0.98
RECQL4-209ENST00000617875 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.18■□□□□ 0.98
RECQL4-209ENST00000617875 NCOA2Q15596 1464 aa21.14■□□□□ 0.97
RECQL4-209ENST00000617875 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
RECQL4-209ENST00000617875 EXOC6Q8TAG9 804 aa21.14■□□□□ 0.97
RECQL4-209ENST00000617875 TIAM1Q13009 1591 aa21.13■□□□□ 0.97
RECQL4-209ENST00000617875 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
RECQL4-209ENST00000617875 SLC4A3P48751 1232 aa21.13■□□□□ 0.97
RECQL4-209ENST00000617875 KNSTRNQ9Y448 316 aa21.13■□□□□ 0.97
RECQL4-209ENST00000617875 SKAP1Q86WV1 359 aa21.12■□□□□ 0.97
RECQL4-209ENST00000617875 NUDCQ9Y266 331 aa21.12■□□□□ 0.97
RECQL4-209ENST00000617875 MYOM3Q5VTT5 1437 aa21.11■□□□□ 0.97
RECQL4-209ENST00000617875 FRAT1Q92837 279 aaPredicted RBP21.11■□□□□ 0.97
RECQL4-209ENST00000617875 RCAN3Q9UKA8 241 aa21.1■□□□□ 0.97
RECQL4-209ENST00000617875 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
RECQL4-209ENST00000617875 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
RECQL4-209ENST00000617875 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
RECQL4-209ENST00000617875 SAFB2Q14151 953 aaKnown RBP eCLIP21.09■□□□□ 0.97
RECQL4-209ENST00000617875 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
RECQL4-209ENST00000617875 MAPKBP1O60336 1514 aa21.08■□□□□ 0.96
RECQL4-209ENST00000617875 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
RECQL4-209ENST00000617875 ROCK2O75116 1388 aaKnown RBP21.07■□□□□ 0.96
RECQL4-209ENST00000617875 PTPRKQ15262 1439 aa21.07■□□□□ 0.96
RECQL4-209ENST00000617875 AKNAQ7Z591 1439 aa21.07■□□□□ 0.96
RECQL4-209ENST00000617875 USP47Q96K76 1375 aa21.06■□□□□ 0.96
RECQL4-209ENST00000617875 CDCA7LQ96GN5 454 aa21.06■□□□□ 0.96
RECQL4-209ENST00000617875 CASKIN1Q8WXD9 1431 aa21.06■□□□□ 0.96
RECQL4-209ENST00000617875 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
RECQL4-209ENST00000617875 SLC24A1O60721 1099 aa21.04■□□□□ 0.96
RECQL4-209ENST00000617875 IPO9Q96P70 1041 aaKnown RBP21.03■□□□□ 0.96
RECQL4-209ENST00000617875 NUTM2DQ5VT03 806 aaPredicted RBP21.03■□□□□ 0.96
RECQL4-209ENST00000617875 ZBED9Q6R2W3 1325 aa21.03■□□□□ 0.96
RECQL4-209ENST00000617875 NAIPQ13075 1403 aa21.02■□□□□ 0.96
RECQL4-209ENST00000617875 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.95
RECQL4-209ENST00000617875 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
RECQL4-209ENST00000617875 NBPF1Q3BBV0 1214 aa21■□□□□ 0.95
RECQL4-209ENST00000617875 PANK3Q9H999 370 aa21■□□□□ 0.95
RECQL4-209ENST00000617875 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
RECQL4-209ENST00000617875 SPRYD3Q8NCJ5 442 aa20.99■□□□□ 0.95
RECQL4-209ENST00000617875 TMF1P82094 1093 aa20.95■□□□□ 0.94
RECQL4-209ENST00000617875 CNTLNQ9NXG0 1405 aa20.94■□□□□ 0.94
RECQL4-209ENST00000617875 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
RECQL4-209ENST00000617875 HFM1A2PYH4 1435 aa20.94■□□□□ 0.94
RECQL4-209ENST00000617875 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
RECQL4-209ENST00000617875 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
RECQL4-209ENST00000617875 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
RECQL4-209ENST00000617875 ERICH6BQ5W0A0 696 aa20.92■□□□□ 0.94
RECQL4-209ENST00000617875 RRP7AQ9Y3A4 280 aaKnown RBP20.92■□□□□ 0.94
RECQL4-209ENST00000617875 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.91■□□□□ 0.94
RECQL4-209ENST00000617875 IL27Q8NEV9 243 aa20.91■□□□□ 0.94
RECQL4-209ENST00000617875 KTN1Q86UP2 1357 aaKnown RBP20.91■□□□□ 0.94
RECQL4-209ENST00000617875 CRBNQ96SW2 442 aa20.91■□□□□ 0.94
RECQL4-209ENST00000617875 FYCO1Q9BQS8 1478 aa20.9■□□□□ 0.94
RECQL4-209ENST00000617875 CLUAP1Q96AJ1 413 aa20.9■□□□□ 0.94
RECQL4-209ENST00000617875 BCL2L13Q9BXK5 485 aa20.9■□□□□ 0.94
RECQL4-209ENST00000617875 ANO8Q9HCE9 1232 aaPredicted RBP20.9■□□□□ 0.94
RECQL4-209ENST00000617875 NLRP13Q86W25 1043 aa20.89■□□□□ 0.93
RECQL4-209ENST00000617875 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.93
RECQL4-209ENST00000617875 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
RECQL4-209ENST00000617875 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
RECQL4-209ENST00000617875 RRP1P56182 461 aaKnown RBP20.87■□□□□ 0.93
RECQL4-209ENST00000617875 GGT6Q6P531 493 aa20.87■□□□□ 0.93
RECQL4-209ENST00000617875 PDE4AP27815 886 aa20.86■□□□□ 0.93
RECQL4-209ENST00000617875 U2SURPO15042 1029 aaKnown RBP20.84■□□□□ 0.93
RECQL4-209ENST00000617875 STK26Q9P289 416 aa20.84■□□□□ 0.93
RECQL4-209ENST00000617875 RALBP1Q15311 655 aa20.84■□□□□ 0.93
RECQL4-209ENST00000617875 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.93
RECQL4-209ENST00000617875 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.92
RECQL4-209ENST00000617875 SLKQ9H2G2 1235 aaPredicted RBP20.82■□□□□ 0.92
RECQL4-209ENST00000617875 PNISRQ8TF01 805 aaKnown RBP20.82■□□□□ 0.92
RECQL4-209ENST00000617875 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
RECQL4-209ENST00000617875 KIF3BO15066 747 aa20.8■□□□□ 0.92
RECQL4-209ENST00000617875 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
RECQL4-209ENST00000617875 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
RECQL4-209ENST00000617875 APAF1O14727 1248 aa20.78■□□□□ 0.92
RECQL4-209ENST00000617875 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
RECQL4-209ENST00000617875 DDRGK1Q96HY6 314 aa20.78■□□□□ 0.92
RECQL4-209ENST00000617875 ADAMTS8Q9UP79 889 aa20.78■□□□□ 0.92
RECQL4-209ENST00000617875 KIF15Q9NS87 1388 aa20.77■□□□□ 0.92
RECQL4-209ENST00000617875 UPF2Q9HAU5 1272 aaKnown RBP20.77■□□□□ 0.92
RECQL4-209ENST00000617875 TRAK1Q9UPV9 953 aa20.77■□□□□ 0.91
RECQL4-209ENST00000617875 NPM1P06748 294 aaKnown RBP eCLIP20.76■□□□□ 0.91
RECQL4-209ENST00000617875 TCERG1O14776 1098 aaKnown RBP20.75■□□□□ 0.91
RECQL4-209ENST00000617875 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
RECQL4-209ENST00000617875 CARMIL2Q6F5E8 1435 aa20.73■□□□□ 0.91
RECQL4-209ENST00000617875 SOX12O15370 315 aa20.72■□□□□ 0.91
RECQL4-209ENST00000617875 MORC1Q86VD1 984 aa20.72■□□□□ 0.91
RECQL4-209ENST00000617875 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
RECQL4-209ENST00000617875 CCDC144AA2RUR9 1427 aa20.71■□□□□ 0.91
RECQL4-209ENST00000617875 ANKRD30BQ9BXX2 1392 aa20.71■□□□□ 0.91
RECQL4-209ENST00000617875 C20orf194Q5TEA3 1177 aa20.7■□□□□ 0.9
RECQL4-209ENST00000617875 FTSJ3Q8IY81 847 aaKnown RBP20.7■□□□□ 0.9
RECQL4-209ENST00000617875 AFAP1Q8N556 730 aa20.7■□□□□ 0.9
RECQL4-209ENST00000617875 COG6Q9Y2V7 657 aa20.7■□□□□ 0.9
RECQL4-209ENST00000617875 TPRNQ4KMQ1 711 aa20.69■□□□□ 0.9
RECQL4-209ENST00000617875 BRPF3Q9ULD4 1205 aa20.68■□□□□ 0.9
RECQL4-209ENST00000617875 GZF1Q9H116 711 aaPredicted RBP20.68■□□□□ 0.9
RECQL4-209ENST00000617875 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
RECQL4-209ENST00000617875 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.9
RECQL4-209ENST00000617875 EPRSP07814 1512 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms