RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ABCA5Q8WWZ7 1642 aa4.48□□□□□ -1.69
LPP-220ENST00000617246 SHROOM2Q13796 1616 aa4.48□□□□□ -1.69
LPP-220ENST00000617246 PLEKHG5O94827 1062 aa4.48□□□□□ -1.69
LPP-220ENST00000617246 CADPSQ9ULU8 1353 aa4.48□□□□□ -1.69
LPP-220ENST00000617246 TOM1O60784 492 aa4.48□□□□□ -1.69
LPP-220ENST00000617246 FAM135AQ9P2D6 1515 aa4.48□□□□□ -1.69
LPP-220ENST00000617246 POGKQ9P215 609 aa4.47□□□□□ -1.69
LPP-220ENST00000617246 FHOD3Q2V2M9 1422 aa4.47□□□□□ -1.69
LPP-220ENST00000617246 YTHDC1Q96MU7 727 aaKnown RBP4.47□□□□□ -1.69
LPP-220ENST00000617246 RIMS1Q86UR5 1692 aaKnown RBP4.47□□□□□ -1.69
LPP-220ENST00000617246 BIVM-ERCC5R4GMW8 1640 aa4.47□□□□□ -1.69
LPP-220ENST00000617246 UHRF1BP1Q6BDS2 1440 aa4.46□□□□□ -1.69
LPP-220ENST00000617246 NEUROD2Q15784 382 aa4.46□□□□□ -1.69
LPP-220ENST00000617246 IL27Q8NEV9 243 aa4.46□□□□□ -1.69
LPP-220ENST00000617246 RAPGEF6Q8TEU7 1601 aa4.46□□□□□ -1.7
LPP-220ENST00000617246 ERCC6L2Q5T890 1561 aa4.46□□□□□ -1.7
LPP-220ENST00000617246 FGD5Q6ZNL6 1462 aa4.46□□□□□ -1.7
LPP-220ENST00000617246 NUTM2BA6NNL0 878 aaPredicted RBP4.46□□□□□ -1.7
LPP-220ENST00000617246 NUTM2EB1AL46 878 aaPredicted RBP4.46□□□□□ -1.7
LPP-220ENST00000617246 NUTM2DQ5VT03 806 aaPredicted RBP4.46□□□□□ -1.7
LPP-220ENST00000617246 NUTM2AQ8IVF1 878 aaPredicted RBP4.46□□□□□ -1.7
LPP-220ENST00000617246 ANP32EQ9BTT0 268 aa4.46□□□□□ -1.7
LPP-220ENST00000617246 MYH16Q9H6N6 1097 aa4.46□□□□□ -1.7
LPP-220ENST00000617246 ZEB1P37275 1124 aaPredicted RBP4.45□□□□□ -1.7
LPP-220ENST00000617246 PLB1Q6P1J6 1458 aa4.45□□□□□ -1.7
LPP-220ENST00000617246 CTDP1Q9Y5B0 961 aaPredicted RBP4.45□□□□□ -1.7
LPP-220ENST00000617246 ATAD2BQ9ULI0 1458 aa4.45□□□□□ -1.7
LPP-220ENST00000617246 THOC2Q8NI27 1593 aaKnown RBP4.45□□□□□ -1.7
LPP-220ENST00000617246 KIAA0556O60303 1618 aa4.45□□□□□ -1.7
LPP-220ENST00000617246 WDR62O43379 1518 aa4.45□□□□□ -1.7
LPP-220ENST00000617246 ARHGAP35Q9NRY4 1499 aa4.45□□□□□ -1.7
LPP-220ENST00000617246 PNNQ9H307 717 aaKnown RBP4.45□□□□□ -1.7
LPP-220ENST00000617246 EVA1CP58658 441 aa4.45□□□□□ -1.7
LPP-220ENST00000617246 P3H3Q8IVL6 736 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 TONSLQ96HA7 1378 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 RIMBP3CA6NJZ7 1639 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 RIMBP3BA6NNM3 1639 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 RIMBP3Q9UFD9 1639 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 EFCAB2Q5VUJ9 269 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 SPAG9O60271 1321 aaKnown RBP4.44□□□□□ -1.7
LPP-220ENST00000617246 BEGAINQ9BUH8 593 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 NGLY1Q96IV0 654 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 TRIM34Q9BYJ4 488 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 NCOA2Q15596 1464 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 NBPF8Q3BBV2 869 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 NBPF14Q5TI25 921 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 CFAP53Q96M91 514 aa4.44□□□□□ -1.7
LPP-220ENST00000617246 CFDP1Q9UEE9 299 aaPredicted RBP4.44□□□□□ -1.7
LPP-220ENST00000617246 LRPPRCP42704 1394 aaKnown RBP4.44□□□□□ -1.7
LPP-220ENST00000617246 EHBP1L1Q8N3D4 1523 aa4.43□□□□□ -1.7
LPP-220ENST00000617246 CLSTN1O94985 981 aa4.43□□□□□ -1.7
LPP-220ENST00000617246 CNKSR2Q8WXI2 1034 aa4.43□□□□□ -1.7
LPP-220ENST00000617246 KDM5CP41229 1560 aa4.43□□□□□ -1.7
LPP-220ENST00000617246 PAK3O75914 559 aaPredicted RBP4.43□□□□□ -1.7
LPP-220ENST00000617246 CFAP65Q6ZU64 1925 aaKnown RBP4.43□□□□□ -1.7
LPP-220ENST00000617246 ERICH3Q5RHP9 1530 aa4.43□□□□□ -1.7
LPP-220ENST00000617246 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
LPP-220ENST00000617246 ZNF316A6NFI3 1004 aaPredicted RBP4.43□□□□□ -1.7
LPP-220ENST00000617246 PREX1Q8TCU6 1659 aa4.43□□□□□ -1.7
LPP-220ENST00000617246 PIP4K2BP78356 416 aa4.43□□□□□ -1.7
LPP-220ENST00000617246 MIA2Q96PC5 1412 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 DAPK1P53355 1430 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 AMOTL1Q8IY63 956 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 ABCA8O94911 1581 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 MAPK8IP3Q9UPT6 1336 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 RAPGEF2Q9Y4G8 1499 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 TNIKQ9UKE5 1360 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 SSFA2P28290 1259 aa4.42□□□□□ -1.7
LPP-220ENST00000617246 PAXIP1Q6ZW49 1069 aaPredicted RBP4.42□□□□□ -1.7
LPP-220ENST00000617246 GTF2E1P29083 439 aaPredicted RBP4.42□□□□□ -1.7
LPP-220ENST00000617246 ADAMTS12P58397 1594 aa4.41□□□□□ -1.7
LPP-220ENST00000617246 CCAR1Q8IX12 1150 aaKnown RBP4.41□□□□□ -1.7
LPP-220ENST00000617246 GGT6Q6P531 493 aa4.41□□□□□ -1.7
LPP-220ENST00000617246 ZC3H13Q5T200 1668 aaKnown RBP4.41□□□□□ -1.7
LPP-220ENST00000617246 MROH2BQ7Z745 1585 aa4.41□□□□□ -1.7
LPP-220ENST00000617246 SCAPERQ9BY12 1400 aa4.41□□□□□ -1.7
LPP-220ENST00000617246 EIF5BO60841 1220 aaKnown RBP4.41□□□□□ -1.7
LPP-220ENST00000617246 PSME1Q06323 249 aa4.41□□□□□ -1.7
LPP-220ENST00000617246 NOL10Q9BSC4 688 aaKnown RBP4.41□□□□□ -1.7
LPP-220ENST00000617246 NCAPD3P42695 1498 aa4.41□□□□□ -1.7
LPP-220ENST00000617246 TOPBP1Q92547 1522 aa4.4□□□□□ -1.7
LPP-220ENST00000617246 ISY1Q9ULR0 285 aaKnown RBP4.4□□□□□ -1.7
LPP-220ENST00000617246 KIAA0586Q9BVV6 1533 aa4.4□□□□□ -1.7
LPP-220ENST00000617246 PTPRGP23470 1445 aa4.4□□□□□ -1.7
LPP-220ENST00000617246 DISP3Q9P2K9 1392 aa4.4□□□□□ -1.7
LPP-220ENST00000617246 HDGFL2Q7Z4V5 671 aaPredicted RBP4.4□□□□□ -1.7
LPP-220ENST00000617246 MSH6P52701 1360 aa4.4□□□□□ -1.71
LPP-220ENST00000617246 CNTLNQ9NXG0 1405 aa4.4□□□□□ -1.71
LPP-220ENST00000617246 WDR43Q15061 677 aaKnown RBP eCLIP4.39□□□□□ -1.71
LPP-220ENST00000617246 HSP90B1P14625 803 aaKnown RBP4.39□□□□□ -1.71
LPP-220ENST00000617246 WASHC2CQ9Y4E1 1318 aa4.39□□□□□ -1.71
LPP-220ENST00000617246 YEATS2Q9ULM3 1422 aa4.39□□□□□ -1.71
LPP-220ENST00000617246 RBM33Q96EV2 1170 aaKnown RBP4.39□□□□□ -1.71
LPP-220ENST00000617246 ZFYVE16Q7Z3T8 1539 aa4.39□□□□□ -1.71
LPP-220ENST00000617246 ZCCHC11Q5TAX3 1644 aaKnown RBP4.38□□□□□ -1.71
LPP-220ENST00000617246 TTC37Q6PGP7 1564 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 RSPH4AQ5TD94 716 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 HECW2Q9P2P5 1572 aa4.38□□□□□ -1.71
LPP-220ENST00000617246 POLR1AO95602 1720 aaPredicted RBP4.38□□□□□ -1.71
LPP-220ENST00000617246 POLD1P28340 1107 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms