RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
MALAT1-208ENST00000616527 PKD2Q13563 968 aa12.48□□□□□ -0.41
MALAT1-208ENST00000616527 MAMSTRQ6ZN01 415 aa12.48□□□□□ -0.41
MALAT1-208ENST00000616527 KIF21BO75037 1637 aa12.48□□□□□ -0.41
MALAT1-208ENST00000616527 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
MALAT1-208ENST00000616527 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
MALAT1-208ENST00000616527 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.41
MALAT1-208ENST00000616527 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
MALAT1-208ENST00000616527 CABP2Q9NPB3 220 aa12.44□□□□□ -0.42
MALAT1-208ENST00000616527 KIF27Q86VH2 1401 aa12.44□□□□□ -0.42
MALAT1-208ENST00000616527 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
MALAT1-208ENST00000616527 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
MALAT1-208ENST00000616527 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
MALAT1-208ENST00000616527 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
MALAT1-208ENST00000616527 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
MALAT1-208ENST00000616527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
MALAT1-208ENST00000616527 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
MALAT1-208ENST00000616527 CEP162Q5TB80 1403 aa12.39□□□□□ -0.43
MALAT1-208ENST00000616527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.43
MALAT1-208ENST00000616527 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
MALAT1-208ENST00000616527 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
MALAT1-208ENST00000616527 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
MALAT1-208ENST00000616527 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
MALAT1-208ENST00000616527 FGD5Q6ZNL6 1462 aa12.35□□□□□ -0.43
MALAT1-208ENST00000616527 RGL2O15211 777 aa12.35□□□□□ -0.43
MALAT1-208ENST00000616527 UBTFP17480 764 aaKnown RBP12.35□□□□□ -0.43
MALAT1-208ENST00000616527 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
MALAT1-208ENST00000616527 NESP48681 1621 aa12.34□□□□□ -0.43
MALAT1-208ENST00000616527 EFCAB3Q8N7B9 438 aa12.34□□□□□ -0.43
MALAT1-208ENST00000616527 IGF1RP08069 1367 aa12.33□□□□□ -0.44
MALAT1-208ENST00000616527 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
MALAT1-208ENST00000616527 RAPGEF2Q9Y4G8 1499 aa12.33□□□□□ -0.44
MALAT1-208ENST00000616527 CUX2O14529 1486 aa12.31□□□□□ -0.44
MALAT1-208ENST00000616527 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
MALAT1-208ENST00000616527 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
MALAT1-208ENST00000616527 SOX12O15370 315 aa12.28□□□□□ -0.44
MALAT1-208ENST00000616527 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
MALAT1-208ENST00000616527 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
MALAT1-208ENST00000616527 CLIP1P30622 1438 aa12.28□□□□□ -0.44
MALAT1-208ENST00000616527 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.44
MALAT1-208ENST00000616527 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
MALAT1-208ENST00000616527 STK25O00506 426 aa12.25□□□□□ -0.45
MALAT1-208ENST00000616527 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
MALAT1-208ENST00000616527 CARMIL1Q5VZK9 1371 aa12.24□□□□□ -0.45
MALAT1-208ENST00000616527 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
MALAT1-208ENST00000616527 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.23□□□□□ -0.45
MALAT1-208ENST00000616527 VPS8Q8N3P4 1428 aa12.22□□□□□ -0.45
MALAT1-208ENST00000616527 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
MALAT1-208ENST00000616527 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
MALAT1-208ENST00000616527 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
MALAT1-208ENST00000616527 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
MALAT1-208ENST00000616527 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
MALAT1-208ENST00000616527 G3V3G9 751 aa12.18□□□□□ -0.46
MALAT1-208ENST00000616527 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
MALAT1-208ENST00000616527 CUL7Q14999 1698 aa12.16□□□□□ -0.46
MALAT1-208ENST00000616527 HRCP23327 699 aa12.16□□□□□ -0.46
MALAT1-208ENST00000616527 NLRP6P59044 892 aa12.16□□□□□ -0.46
MALAT1-208ENST00000616527 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
MALAT1-208ENST00000616527 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
MALAT1-208ENST00000616527 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.47
MALAT1-208ENST00000616527 TMEM121BQ9BXQ6 578 aaPredicted RBP12.14□□□□□ -0.47
MALAT1-208ENST00000616527 WDR62O43379 1518 aa12.14□□□□□ -0.47
MALAT1-208ENST00000616527 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
MALAT1-208ENST00000616527 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
MALAT1-208ENST00000616527 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
MALAT1-208ENST00000616527 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
MALAT1-208ENST00000616527 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
MALAT1-208ENST00000616527 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
MALAT1-208ENST00000616527 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
MALAT1-208ENST00000616527 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
MALAT1-208ENST00000616527 ARHGAP35Q9NRY4 1499 aa12.1□□□□□ -0.47
MALAT1-208ENST00000616527 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
MALAT1-208ENST00000616527 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
MALAT1-208ENST00000616527 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
MALAT1-208ENST00000616527 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
MALAT1-208ENST00000616527 LCE2DQ5TA82 110 aaPredicted RBP12.06□□□□□ -0.48
MALAT1-208ENST00000616527 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
MALAT1-208ENST00000616527 FHAD1B1AJZ9 1412 aa12.05□□□□□ -0.48
MALAT1-208ENST00000616527 SNPHO15079 494 aa12.05□□□□□ -0.48
MALAT1-208ENST00000616527 GRIN2BQ13224 1484 aa12.05□□□□□ -0.48
MALAT1-208ENST00000616527 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
MALAT1-208ENST00000616527 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
MALAT1-208ENST00000616527 ERCC6Q03468 1493 aa12.02□□□□□ -0.48
MALAT1-208ENST00000616527 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.49
MALAT1-208ENST00000616527 POTEMA6NI47 508 aa12.01□□□□□ -0.49
MALAT1-208ENST00000616527 DNAJC5Q9H3Z4 198 aa12.01□□□□□ -0.49
MALAT1-208ENST00000616527 POTEGQ6S5H5 508 aa12□□□□□ -0.49
MALAT1-208ENST00000616527 THOC2Q8NI27 1593 aaKnown RBP12□□□□□ -0.49
MALAT1-208ENST00000616527 ST18O60284 1047 aa11.99□□□□□ -0.49
MALAT1-208ENST00000616527 PPARGC1BQ86YN6 1023 aaKnown RBP11.98□□□□□ -0.49
MALAT1-208ENST00000616527 ADAMTS12P58397 1594 aa11.96□□□□□ -0.49
MALAT1-208ENST00000616527 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
MALAT1-208ENST00000616527 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
MALAT1-208ENST00000616527 CTTNBP2Q8WZ74 1663 aa11.95□□□□□ -0.5
MALAT1-208ENST00000616527 MAGI1Q96QZ7 1491 aaPredicted RBP11.95□□□□□ -0.5
MALAT1-208ENST00000616527 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
MALAT1-208ENST00000616527 PBRM1Q86U86 1689 aa11.94□□□□□ -0.5
MALAT1-208ENST00000616527 SAMD9Q5K651 1589 aa11.93□□□□□ -0.5
MALAT1-208ENST00000616527 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
MALAT1-208ENST00000616527 PPP1R37O75864 691 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms