RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 PTPRKQ15262 1439 aa10.83□□□□□ -0.68
MID1-212ENST00000616003 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
MID1-212ENST00000616003 DHX37Q8IY37 1157 aaKnown RBP10.82□□□□□ -0.68
MID1-212ENST00000616003 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
MID1-212ENST00000616003 GRIN2BQ13224 1484 aa10.82□□□□□ -0.68
MID1-212ENST00000616003 MTUS2Q5JR59 1369 aa10.82□□□□□ -0.68
MID1-212ENST00000616003 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
MID1-212ENST00000616003 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
MID1-212ENST00000616003 TCOF1Q13428 1488 aaKnown RBP10.8□□□□□ -0.68
MID1-212ENST00000616003 CNTLNQ9NXG0 1405 aa10.8□□□□□ -0.68
MID1-212ENST00000616003 HIRIP3Q9BW71 556 aaPredicted RBP10.8□□□□□ -0.68
MID1-212ENST00000616003 POLR1AO95602 1720 aaPredicted RBP10.79□□□□□ -0.68
MID1-212ENST00000616003 ABCA5Q8WWZ7 1642 aa10.79□□□□□ -0.68
MID1-212ENST00000616003 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
MID1-212ENST00000616003 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
MID1-212ENST00000616003 CDK11AQ9UQ88 783 aaPredicted RBP10.78□□□□□ -0.68
MID1-212ENST00000616003 RAD54L2Q9Y4B4 1467 aa10.78□□□□□ -0.68
MID1-212ENST00000616003 CCDC136Q96JN2 1154 aa10.77□□□□□ -0.69
MID1-212ENST00000616003 P3H3Q8IVL6 736 aa10.76□□□□□ -0.69
MID1-212ENST00000616003 DENND4BO75064 1496 aaPredicted RBP10.76□□□□□ -0.69
MID1-212ENST00000616003 AAMPQ13685 434 aa10.75□□□□□ -0.69
MID1-212ENST00000616003 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
MID1-212ENST00000616003 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
MID1-212ENST00000616003 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
MID1-212ENST00000616003 NCOA1Q15788 1441 aa10.74□□□□□ -0.69
MID1-212ENST00000616003 CDK11BP21127 795 aaKnown RBP10.74□□□□□ -0.69
MID1-212ENST00000616003 MAGI3Q5TCQ9 1506 aa10.73□□□□□ -0.69
MID1-212ENST00000616003 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
MID1-212ENST00000616003 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
MID1-212ENST00000616003 LAMC3Q9Y6N6 1575 aa10.71□□□□□ -0.7
MID1-212ENST00000616003 ZBED9Q6R2W3 1325 aa10.71□□□□□ -0.7
MID1-212ENST00000616003 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.7
MID1-212ENST00000616003 KDM6BO15054 1643 aa10.71□□□□□ -0.7
MID1-212ENST00000616003 A0A0U1RQG5 324 aaPredicted RBP10.7□□□□□ -0.7
MID1-212ENST00000616003 HSPA5P11021 654 aaKnown RBP10.7□□□□□ -0.7
MID1-212ENST00000616003 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
MID1-212ENST00000616003 NESP48681 1621 aa10.7□□□□□ -0.7
MID1-212ENST00000616003 GLIPR1L2Q4G1C9 344 aa10.7□□□□□ -0.7
MID1-212ENST00000616003 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
MID1-212ENST00000616003 MIA2Q96PC5 1412 aa10.7□□□□□ -0.7
MID1-212ENST00000616003 CCDC7Q96M83 1385 aa10.69□□□□□ -0.7
MID1-212ENST00000616003 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
MID1-212ENST00000616003 RSPH6AQ9H0K4 717 aa10.68□□□□□ -0.7
MID1-212ENST00000616003 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
MID1-212ENST00000616003 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
MID1-212ENST00000616003 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
MID1-212ENST00000616003 HSP90B1P14625 803 aaKnown RBP10.66□□□□□ -0.7
MID1-212ENST00000616003 GAPVD1Q14C86 1478 aa10.66□□□□□ -0.7
MID1-212ENST00000616003 WDR62O43379 1518 aa10.66□□□□□ -0.7
MID1-212ENST00000616003 PRKRIP1Q9H875 184 aaPredicted RBP10.66□□□□□ -0.7
MID1-212ENST00000616003 DNMT1P26358 1616 aaKnown RBP10.65□□□□□ -0.7
MID1-212ENST00000616003 ROCK1Q13464 1354 aa10.65□□□□□ -0.7
MID1-212ENST00000616003 EPRSP07814 1512 aaKnown RBP10.65□□□□□ -0.7
MID1-212ENST00000616003 SPATA31E1Q6ZUB1 1445 aa10.64□□□□□ -0.71
MID1-212ENST00000616003 IQGAP2Q13576 1575 aa10.64□□□□□ -0.71
MID1-212ENST00000616003 SMG6Q86US8 1419 aaKnown RBP10.63□□□□□ -0.71
MID1-212ENST00000616003 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
MID1-212ENST00000616003 PBRM1Q86U86 1689 aa10.62□□□□□ -0.71
MID1-212ENST00000616003 KIF14Q15058 1648 aa10.62□□□□□ -0.71
MID1-212ENST00000616003 MBD5Q9P267 1494 aa10.62□□□□□ -0.71
MID1-212ENST00000616003 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
MID1-212ENST00000616003 MRS2Q9HD23 443 aa10.62□□□□□ -0.71
MID1-212ENST00000616003 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
MID1-212ENST00000616003 DAPK1P53355 1430 aa10.61□□□□□ -0.71
MID1-212ENST00000616003 CDK13Q14004 1512 aaKnown RBP10.6□□□□□ -0.71
MID1-212ENST00000616003 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
MID1-212ENST00000616003 RRP7BPQ9NSQ0 103 aa10.6□□□□□ -0.71
MID1-212ENST00000616003 TARBP1Q13395 1621 aaKnown RBP10.6□□□□□ -0.71
MID1-212ENST00000616003 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
MID1-212ENST00000616003 ADGBQ8N7X0 1667 aa10.6□□□□□ -0.71
MID1-212ENST00000616003 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
MID1-212ENST00000616003 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
MID1-212ENST00000616003 MPHOSPH9Q99550 1183 aa10.6□□□□□ -0.71
MID1-212ENST00000616003 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
MID1-212ENST00000616003 KIF7Q2M1P5 1343 aa10.59□□□□□ -0.71
MID1-212ENST00000616003 BCCIPQ9P287 314 aaKnown RBP eCLIP10.58□□□□□ -0.72
MID1-212ENST00000616003 NOP58Q9Y2X3 529 aaKnown RBP10.58□□□□□ -0.72
MID1-212ENST00000616003 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.72
MID1-212ENST00000616003 DEKP35659 375 aaKnown RBP10.58□□□□□ -0.72
MID1-212ENST00000616003 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
MID1-212ENST00000616003 C11orf95C9JLR9 678 aaPredicted RBP10.57□□□□□ -0.72
MID1-212ENST00000616003 FAM9BQ8IZU0 186 aa10.57□□□□□ -0.72
MID1-212ENST00000616003 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
MID1-212ENST00000616003 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
MID1-212ENST00000616003 KDM5CP41229 1560 aa10.57□□□□□ -0.72
MID1-212ENST00000616003 CROCC2H7BZ55 1655 aa10.57□□□□□ -0.72
MID1-212ENST00000616003 ZMYND15Q9H091 742 aa10.56□□□□□ -0.72
MID1-212ENST00000616003 ITSN2Q9NZM3 1697 aa10.56□□□□□ -0.72
MID1-212ENST00000616003 BCORL1Q5H9F3 1711 aa10.55□□□□□ -0.72
MID1-212ENST00000616003 PZPP20742 1482 aa10.55□□□□□ -0.72
MID1-212ENST00000616003 CHIC2Q9UKJ5 165 aa10.55□□□□□ -0.72
MID1-212ENST00000616003 ABCC5O15440 1437 aa10.55□□□□□ -0.72
MID1-212ENST00000616003 NUDCQ9Y266 331 aa10.54□□□□□ -0.72
MID1-212ENST00000616003 NBPF8Q3BBV2 869 aa10.54□□□□□ -0.72
MID1-212ENST00000616003 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
MID1-212ENST00000616003 KIAA0556O60303 1618 aa10.53□□□□□ -0.72
MID1-212ENST00000616003 E9PCH4 1651 aa10.53□□□□□ -0.72
MID1-212ENST00000616003 ADGRL2O95490 1459 aa10.52□□□□□ -0.72
MID1-212ENST00000616003 RALGAPBQ86X10 1494 aa10.52□□□□□ -0.72
MID1-212ENST00000616003 ARHGEF12Q9NZN5 1544 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms