RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
SSBP2-220ENST00000615665 MIA2Q96PC5 1412 aa18.83■□□□□ 0.61
SSBP2-220ENST00000615665 IQGAP2Q13576 1575 aa18.83■□□□□ 0.6
SSBP2-220ENST00000615665 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
SSBP2-220ENST00000615665 NAIPQ13075 1403 aa18.82■□□□□ 0.6
SSBP2-220ENST00000615665 EPRSP07814 1512 aaKnown RBP18.81■□□□□ 0.6
SSBP2-220ENST00000615665 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
SSBP2-220ENST00000615665 PTPRGP23470 1445 aa18.8■□□□□ 0.6
SSBP2-220ENST00000615665 RSPH4AQ5TD94 716 aa18.79■□□□□ 0.6
SSBP2-220ENST00000615665 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
SSBP2-220ENST00000615665 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
SSBP2-220ENST00000615665 ANP32AP39687 249 aaKnown RBP18.77■□□□□ 0.59
SSBP2-220ENST00000615665 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
SSBP2-220ENST00000615665 KIAA0586Q9BVV6 1533 aa18.76■□□□□ 0.59
SSBP2-220ENST00000615665 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
SSBP2-220ENST00000615665 CANXP27824 592 aaKnown RBP18.74■□□□□ 0.59
SSBP2-220ENST00000615665 EFCAB2Q5VUJ9 269 aa18.74■□□□□ 0.59
SSBP2-220ENST00000615665 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
SSBP2-220ENST00000615665 ROCK2O75116 1388 aaKnown RBP18.74■□□□□ 0.59
SSBP2-220ENST00000615665 MAPKBP1O60336 1514 aa18.73■□□□□ 0.59
SSBP2-220ENST00000615665 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
SSBP2-220ENST00000615665 CFAP43Q8NDM7 1665 aa18.72■□□□□ 0.59
SSBP2-220ENST00000615665 PRKRIP1Q9H875 184 aaPredicted RBP18.72■□□□□ 0.59
SSBP2-220ENST00000615665 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.59
SSBP2-220ENST00000615665 KNSTRNQ9Y448 316 aa18.71■□□□□ 0.59
SSBP2-220ENST00000615665 PRG4Q92954 1404 aaPredicted RBP18.71■□□□□ 0.59
SSBP2-220ENST00000615665 TMF1P82094 1093 aa18.7■□□□□ 0.58
SSBP2-220ENST00000615665 DAPK1P53355 1430 aa18.69■□□□□ 0.58
SSBP2-220ENST00000615665 WASHC2AQ641Q2 1341 aa18.69■□□□□ 0.58
SSBP2-220ENST00000615665 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
SSBP2-220ENST00000615665 USP47Q96K76 1375 aa18.68■□□□□ 0.58
SSBP2-220ENST00000615665 CCDC7Q96M83 1385 aa18.68■□□□□ 0.58
SSBP2-220ENST00000615665 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
SSBP2-220ENST00000615665 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
SSBP2-220ENST00000615665 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
SSBP2-220ENST00000615665 NPM2Q86SE8 214 aaKnown RBP18.66■□□□□ 0.58
SSBP2-220ENST00000615665 KANK1Q14678 1352 aa18.66■□□□□ 0.58
SSBP2-220ENST00000615665 KIF15Q9NS87 1388 aa18.65■□□□□ 0.58
SSBP2-220ENST00000615665 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
SSBP2-220ENST00000615665 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
SSBP2-220ENST00000615665 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.58
SSBP2-220ENST00000615665 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
SSBP2-220ENST00000615665 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.57
SSBP2-220ENST00000615665 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
SSBP2-220ENST00000615665 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
SSBP2-220ENST00000615665 ERICH6BQ5W0A0 696 aa18.63■□□□□ 0.57
SSBP2-220ENST00000615665 ST20-MTHFSA0A0A6YYL1 179 aa18.63■□□□□ 0.57
SSBP2-220ENST00000615665 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
SSBP2-220ENST00000615665 KIF7Q2M1P5 1343 aa18.63■□□□□ 0.57
SSBP2-220ENST00000615665 RALBP1Q15311 655 aa18.63■□□□□ 0.57
SSBP2-220ENST00000615665 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.63■□□□□ 0.57
SSBP2-220ENST00000615665 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
SSBP2-220ENST00000615665 NBR1Q14596 966 aa18.61■□□□□ 0.57
SSBP2-220ENST00000615665 EIF5BO60841 1220 aaKnown RBP18.6■□□□□ 0.57
SSBP2-220ENST00000615665 SYNJ2O15056 1496 aa18.6■□□□□ 0.57
SSBP2-220ENST00000615665 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
SSBP2-220ENST00000615665 NBPF8Q3BBV2 869 aa18.59■□□□□ 0.57
SSBP2-220ENST00000615665 SPAG9O60271 1321 aaKnown RBP18.59■□□□□ 0.57
SSBP2-220ENST00000615665 RBM19Q9Y4C8 960 aaKnown RBP18.58■□□□□ 0.56
SSBP2-220ENST00000615665 ABCC5O15440 1437 aa18.57■□□□□ 0.56
SSBP2-220ENST00000615665 NEFMP07197 916 aa18.57■□□□□ 0.56
SSBP2-220ENST00000615665 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
SSBP2-220ENST00000615665 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
SSBP2-220ENST00000615665 PLB1Q6P1J6 1458 aa18.56■□□□□ 0.56
SSBP2-220ENST00000615665 ANP32EQ9BTT0 268 aa18.56■□□□□ 0.56
SSBP2-220ENST00000615665 C9orf84Q5VXU9 1444 aa18.56■□□□□ 0.56
SSBP2-220ENST00000615665 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
SSBP2-220ENST00000615665 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
SSBP2-220ENST00000615665 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
SSBP2-220ENST00000615665 AKNAQ7Z591 1439 aa18.54■□□□□ 0.56
SSBP2-220ENST00000615665 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
SSBP2-220ENST00000615665 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
SSBP2-220ENST00000615665 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
SSBP2-220ENST00000615665 ADAMTS12P58397 1594 aa18.52■□□□□ 0.56
SSBP2-220ENST00000615665 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.56
SSBP2-220ENST00000615665 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.56
SSBP2-220ENST00000615665 KIF3BO15066 747 aa18.52■□□□□ 0.55
SSBP2-220ENST00000615665 NLRP13Q86W25 1043 aa18.52■□□□□ 0.55
SSBP2-220ENST00000615665 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
SSBP2-220ENST00000615665 MYBBP1AQ9BQG0 1328 aaKnown RBP18.5■□□□□ 0.55
SSBP2-220ENST00000615665 ZBTB47Q9UFB7 747 aaPredicted RBP18.5■□□□□ 0.55
SSBP2-220ENST00000615665 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
SSBP2-220ENST00000615665 SAMD9Q5K651 1589 aa18.48■□□□□ 0.55
SSBP2-220ENST00000615665 ARHGAP5Q13017 1502 aa18.48■□□□□ 0.55
SSBP2-220ENST00000615665 TCOF1Q13428 1488 aaKnown RBP18.47■□□□□ 0.55
SSBP2-220ENST00000615665 GGT6Q6P531 493 aa18.45■□□□□ 0.54
SSBP2-220ENST00000615665 WDR62O43379 1518 aa18.45■□□□□ 0.54
SSBP2-220ENST00000615665 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
SSBP2-220ENST00000615665 NCOA1Q15788 1441 aa18.45■□□□□ 0.54
SSBP2-220ENST00000615665 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
SSBP2-220ENST00000615665 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
SSBP2-220ENST00000615665 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
SSBP2-220ENST00000615665 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
SSBP2-220ENST00000615665 RPRD2Q5VT52 1461 aaKnown RBP18.43■□□□□ 0.54
SSBP2-220ENST00000615665 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
SSBP2-220ENST00000615665 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
SSBP2-220ENST00000615665 PANK3Q9H999 370 aa18.42■□□□□ 0.54
SSBP2-220ENST00000615665 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
SSBP2-220ENST00000615665 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
SSBP2-220ENST00000615665 KIF14Q15058 1648 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 359.3 ms