RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.57■□□□□ 0.56
HPS1-215ENST00000613394 CNTLNQ9NXG0 1405 aa18.56■□□□□ 0.56
HPS1-215ENST00000613394 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
HPS1-215ENST00000613394 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
HPS1-215ENST00000613394 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
HPS1-215ENST00000613394 ZBTB47Q9UFB7 747 aaPredicted RBP18.53■□□□□ 0.56
HPS1-215ENST00000613394 PTPN23Q9H3S7 1636 aa18.52■□□□□ 0.56
HPS1-215ENST00000613394 CDK13Q14004 1512 aaKnown RBP18.51■□□□□ 0.55
HPS1-215ENST00000613394 NOP58Q9Y2X3 529 aaKnown RBP18.51■□□□□ 0.55
HPS1-215ENST00000613394 CC2D1BQ5T0F9 858 aaKnown RBP18.5■□□□□ 0.55
HPS1-215ENST00000613394 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
HPS1-215ENST00000613394 NUP155O75694 1391 aa18.48■□□□□ 0.55
HPS1-215ENST00000613394 DAXXQ9UER7 740 aaPredicted RBP18.48■□□□□ 0.55
HPS1-215ENST00000613394 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
HPS1-215ENST00000613394 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
HPS1-215ENST00000613394 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
HPS1-215ENST00000613394 USP47Q96K76 1375 aa18.47■□□□□ 0.55
HPS1-215ENST00000613394 CFAP43Q8NDM7 1665 aa18.46■□□□□ 0.55
HPS1-215ENST00000613394 AKNAQ7Z591 1439 aa18.46■□□□□ 0.55
HPS1-215ENST00000613394 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
HPS1-215ENST00000613394 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
HPS1-215ENST00000613394 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
HPS1-215ENST00000613394 HNRNPMP52272 730 aaKnown RBP eCLIP18.45■□□□□ 0.54
HPS1-215ENST00000613394 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
HPS1-215ENST00000613394 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
HPS1-215ENST00000613394 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
HPS1-215ENST00000613394 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
HPS1-215ENST00000613394 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
HPS1-215ENST00000613394 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
HPS1-215ENST00000613394 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
HPS1-215ENST00000613394 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
HPS1-215ENST00000613394 CUL7Q14999 1698 aa18.37■□□□□ 0.53
HPS1-215ENST00000613394 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
HPS1-215ENST00000613394 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
HPS1-215ENST00000613394 PLIN1O60240 522 aa18.36■□□□□ 0.53
HPS1-215ENST00000613394 ANKRD30AQ9BXX3 1397 aa18.36■□□□□ 0.53
HPS1-215ENST00000613394 PRG4Q92954 1404 aaPredicted RBP18.36■□□□□ 0.53
HPS1-215ENST00000613394 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
HPS1-215ENST00000613394 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
HPS1-215ENST00000613394 DAPK1P53355 1430 aa18.34■□□□□ 0.53
HPS1-215ENST00000613394 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
HPS1-215ENST00000613394 JPH4Q96JJ6 628 aa18.33■□□□□ 0.53
HPS1-215ENST00000613394 ABCC5O15440 1437 aa18.31■□□□□ 0.52
HPS1-215ENST00000613394 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
HPS1-215ENST00000613394 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
HPS1-215ENST00000613394 UGGT2Q9NYU1 1516 aa18.31■□□□□ 0.52
HPS1-215ENST00000613394 PNISRQ8TF01 805 aaKnown RBP18.3■□□□□ 0.52
HPS1-215ENST00000613394 MAGI3Q5TCQ9 1506 aa18.3■□□□□ 0.52
HPS1-215ENST00000613394 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
HPS1-215ENST00000613394 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
HPS1-215ENST00000613394 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
HPS1-215ENST00000613394 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
HPS1-215ENST00000613394 IPO9Q96P70 1041 aaKnown RBP18.28■□□□□ 0.52
HPS1-215ENST00000613394 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
HPS1-215ENST00000613394 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
HPS1-215ENST00000613394 HECW1Q76N89 1606 aa18.26■□□□□ 0.51
HPS1-215ENST00000613394 KDM6BO15054 1643 aa18.26■□□□□ 0.51
HPS1-215ENST00000613394 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
HPS1-215ENST00000613394 RALBP1Q15311 655 aa18.26■□□□□ 0.51
HPS1-215ENST00000613394 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
HPS1-215ENST00000613394 MYBBP1AQ9BQG0 1328 aaKnown RBP18.26■□□□□ 0.51
HPS1-215ENST00000613394 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
HPS1-215ENST00000613394 RRP1P56182 461 aaKnown RBP18.25■□□□□ 0.51
HPS1-215ENST00000613394 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
HPS1-215ENST00000613394 KIF15Q9NS87 1388 aa18.25■□□□□ 0.51
HPS1-215ENST00000613394 NEFMP07197 916 aa18.25■□□□□ 0.51
HPS1-215ENST00000613394 NLRP13Q86W25 1043 aa18.24■□□□□ 0.51
HPS1-215ENST00000613394 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
HPS1-215ENST00000613394 CANXP27824 592 aaKnown RBP18.24■□□□□ 0.51
HPS1-215ENST00000613394 RGS3P49796 1198 aa18.23■□□□□ 0.51
HPS1-215ENST00000613394 IQGAP2Q13576 1575 aa18.23■□□□□ 0.51
HPS1-215ENST00000613394 CHGAP10645 457 aaKnown RBP18.23■□□□□ 0.51
HPS1-215ENST00000613394 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
HPS1-215ENST00000613394 PANK3Q9H999 370 aa18.22■□□□□ 0.51
HPS1-215ENST00000613394 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
HPS1-215ENST00000613394 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
HPS1-215ENST00000613394 CARMIL2Q6F5E8 1435 aa18.19■□□□□ 0.5
HPS1-215ENST00000613394 SMG6Q86US8 1419 aaKnown RBP18.19■□□□□ 0.5
HPS1-215ENST00000613394 PDE4AP27815 886 aa18.18■□□□□ 0.5
HPS1-215ENST00000613394 TMF1P82094 1093 aa18.18■□□□□ 0.5
HPS1-215ENST00000613394 ROCK1Q13464 1354 aa18.18■□□□□ 0.5
HPS1-215ENST00000613394 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
HPS1-215ENST00000613394 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
HPS1-215ENST00000613394 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
HPS1-215ENST00000613394 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
HPS1-215ENST00000613394 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
HPS1-215ENST00000613394 TNNT2P45379 298 aaPredicted RBP18.16■□□□□ 0.5
HPS1-215ENST00000613394 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
HPS1-215ENST00000613394 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
HPS1-215ENST00000613394 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
HPS1-215ENST00000613394 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
HPS1-215ENST00000613394 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
HPS1-215ENST00000613394 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
HPS1-215ENST00000613394 SAMD9Q5K651 1589 aa18.14■□□□□ 0.49
HPS1-215ENST00000613394 CCDC144AA2RUR9 1427 aa18.12■□□□□ 0.49
HPS1-215ENST00000613394 CAMSAP2Q08AD1 1489 aa18.12■□□□□ 0.49
HPS1-215ENST00000613394 KDM5BQ9UGL1 1544 aa18.11■□□□□ 0.49
HPS1-215ENST00000613394 DHX29Q7Z478 1369 aaKnown RBP18.11■□□□□ 0.49
HPS1-215ENST00000613394 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.09■□□□□ 0.49
HPS1-215ENST00000613394 NUP153P49790 1475 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms