RNA–Protein interactions for RNA: ENST00000613129.4

SURF4-208, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,148 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-208ENST00000613129 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
SURF4-208ENST00000613129 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
SURF4-208ENST00000613129 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
SURF4-208ENST00000613129 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
SURF4-208ENST00000613129 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
SURF4-208ENST00000613129 SLC4A3P48751 1232 aa22.32■■□□□ 1.16
SURF4-208ENST00000613129 PLIN1O60240 522 aa22.31■■□□□ 1.16
SURF4-208ENST00000613129 SMG6Q86US8 1419 aaKnown RBP22.29■■□□□ 1.16
SURF4-208ENST00000613129 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
SURF4-208ENST00000613129 KDM2AQ9Y2K7 1162 aa22.28■■□□□ 1.16
SURF4-208ENST00000613129 PDE4AP27815 886 aa22.26■■□□□ 1.15
SURF4-208ENST00000613129 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
SURF4-208ENST00000613129 CDCA7LQ96GN5 454 aa22.22■■□□□ 1.15
SURF4-208ENST00000613129 MAGI3Q5TCQ9 1506 aa22.22■■□□□ 1.15
SURF4-208ENST00000613129 BRPF3Q9ULD4 1205 aa22.22■■□□□ 1.15
SURF4-208ENST00000613129 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
SURF4-208ENST00000613129 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
SURF4-208ENST00000613129 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
SURF4-208ENST00000613129 LRRIQ1Q96JM4 1722 aa22.21■■□□□ 1.15
SURF4-208ENST00000613129 ANKRD30BQ9BXX2 1392 aa22.2■■□□□ 1.14
SURF4-208ENST00000613129 RRP1P56182 461 aaKnown RBP22.19■■□□□ 1.14
SURF4-208ENST00000613129 RNF123Q5XPI4 1314 aa22.19■■□□□ 1.14
SURF4-208ENST00000613129 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
SURF4-208ENST00000613129 EFCAB5A4FU69 1503 aa22.18■■□□□ 1.14
SURF4-208ENST00000613129 RCAN3Q9UKA8 241 aa22.17■■□□□ 1.14
SURF4-208ENST00000613129 USP47Q96K76 1375 aa22.17■■□□□ 1.14
SURF4-208ENST00000613129 NESP48681 1621 aa22.16■■□□□ 1.14
SURF4-208ENST00000613129 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
SURF4-208ENST00000613129 SUPT6HQ7KZ85 1726 aaKnown RBP22.13■■□□□ 1.13
SURF4-208ENST00000613129 BACH2Q9BYV9 841 aa22.12■■□□□ 1.13
SURF4-208ENST00000613129 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
SURF4-208ENST00000613129 CARD11Q9BXL7 1154 aa22.12■■□□□ 1.13
SURF4-208ENST00000613129 ST20-MTHFSA0A0A6YYL1 179 aa22.11■■□□□ 1.13
SURF4-208ENST00000613129 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
SURF4-208ENST00000613129 EIF5BO60841 1220 aaKnown RBP22.11■■□□□ 1.13
SURF4-208ENST00000613129 PKD2Q13563 968 aa22.11■■□□□ 1.13
SURF4-208ENST00000613129 RPRD2Q5VT52 1461 aaKnown RBP22.1■■□□□ 1.13
SURF4-208ENST00000613129 UGGT2Q9NYU1 1516 aa22.09■■□□□ 1.13
SURF4-208ENST00000613129 TEX14Q8IWB6 1497 aa22.08■■□□□ 1.12
SURF4-208ENST00000613129 TCERG1O14776 1098 aaKnown RBP22.08■■□□□ 1.12
SURF4-208ENST00000613129 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
SURF4-208ENST00000613129 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
SURF4-208ENST00000613129 CRBNQ96SW2 442 aa22.06■■□□□ 1.12
SURF4-208ENST00000613129 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
SURF4-208ENST00000613129 C20orf194Q5TEA3 1177 aa22.05■■□□□ 1.12
SURF4-208ENST00000613129 EHBP1L1Q8N3D4 1523 aa22.04■■□□□ 1.12
SURF4-208ENST00000613129 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
SURF4-208ENST00000613129 HECW1Q76N89 1606 aa22.04■■□□□ 1.12
SURF4-208ENST00000613129 BCORL1Q5H9F3 1711 aa22.04■■□□□ 1.12
SURF4-208ENST00000613129 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
SURF4-208ENST00000613129 NFKBIBQ15653 356 aa22■■□□□ 1.11
SURF4-208ENST00000613129 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
SURF4-208ENST00000613129 RGL3Q3MIN7 710 aa21.97■■□□□ 1.11
SURF4-208ENST00000613129 ABCC5O15440 1437 aa21.97■■□□□ 1.11
SURF4-208ENST00000613129 DAXXQ9UER7 740 aaPredicted RBP21.96■■□□□ 1.11
SURF4-208ENST00000613129 DAPK1P53355 1430 aa21.96■■□□□ 1.11
SURF4-208ENST00000613129 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
SURF4-208ENST00000613129 RGS3P49796 1198 aa21.95■■□□□ 1.11
SURF4-208ENST00000613129 MYBBP1AQ9BQG0 1328 aaKnown RBP21.95■■□□□ 1.11
SURF4-208ENST00000613129 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.1
SURF4-208ENST00000613129 GSE1Q14687 1217 aa21.95■■□□□ 1.1
SURF4-208ENST00000613129 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
SURF4-208ENST00000613129 EPRSP07814 1512 aaKnown RBP21.94■■□□□ 1.1
SURF4-208ENST00000613129 TCOF1Q13428 1488 aaKnown RBP21.94■■□□□ 1.1
SURF4-208ENST00000613129 THOC2Q8NI27 1593 aaKnown RBP21.94■■□□□ 1.1
SURF4-208ENST00000613129 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
SURF4-208ENST00000613129 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
SURF4-208ENST00000613129 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
SURF4-208ENST00000613129 CFDP1Q9UEE9 299 aaPredicted RBP21.93■■□□□ 1.1
SURF4-208ENST00000613129 KIF15Q9NS87 1388 aa21.92■■□□□ 1.1
SURF4-208ENST00000613129 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
SURF4-208ENST00000613129 ARXQ96QS3 562 aa21.91■■□□□ 1.1
SURF4-208ENST00000613129 SAMD9Q5K651 1589 aa21.9■■□□□ 1.1
SURF4-208ENST00000613129 FRAT2O75474 233 aaPredicted RBP21.9■■□□□ 1.1
SURF4-208ENST00000613129 USP35Q9P2H5 1018 aa21.9■■□□□ 1.1
SURF4-208ENST00000613129 WASHC2CQ9Y4E1 1318 aa21.89■■□□□ 1.1
SURF4-208ENST00000613129 CUL7Q14999 1698 aa21.89■■□□□ 1.09
SURF4-208ENST00000613129 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
SURF4-208ENST00000613129 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
SURF4-208ENST00000613129 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
SURF4-208ENST00000613129 NBPF1Q3BBV0 1214 aa21.87■■□□□ 1.09
SURF4-208ENST00000613129 MS4A1P11836 297 aa21.86■■□□□ 1.09
SURF4-208ENST00000613129 PZPP20742 1482 aa21.86■■□□□ 1.09
SURF4-208ENST00000613129 RALBP1Q15311 655 aa21.85■■□□□ 1.09
SURF4-208ENST00000613129 NLRP13Q86W25 1043 aa21.85■■□□□ 1.09
SURF4-208ENST00000613129 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
SURF4-208ENST00000613129 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
SURF4-208ENST00000613129 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.08
SURF4-208ENST00000613129 NUP155O75694 1391 aa21.83■■□□□ 1.08
SURF4-208ENST00000613129 DDRGK1Q96HY6 314 aa21.81■■□□□ 1.08
SURF4-208ENST00000613129 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
SURF4-208ENST00000613129 ROCK2O75116 1388 aaKnown RBP21.79■■□□□ 1.08
SURF4-208ENST00000613129 KIAA1107Q9UPP5 1409 aa21.79■■□□□ 1.08
SURF4-208ENST00000613129 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
SURF4-208ENST00000613129 KTN1Q86UP2 1357 aaKnown RBP21.78■■□□□ 1.08
SURF4-208ENST00000613129 PANK3Q9H999 370 aa21.78■■□□□ 1.08
SURF4-208ENST00000613129 ADAMTS8Q9UP79 889 aa21.78■■□□□ 1.08
SURF4-208ENST00000613129 ROCK1Q13464 1354 aa21.77■■□□□ 1.08
SURF4-208ENST00000613129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.07
SURF4-208ENST00000613129 KDM5CP41229 1560 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms