RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
FAM3A-221ENST00000612856 PPM1GO15355 546 aaPredicted RBP14.75□□□□□ -0.05
FAM3A-221ENST00000612856 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
FAM3A-221ENST00000612856 PCF11O94913 1555 aaKnown RBP14.75□□□□□ -0.05
FAM3A-221ENST00000612856 PKD2Q13563 968 aa14.75□□□□□ -0.05
FAM3A-221ENST00000612856 NUTM2FA1L443 756 aa14.74□□□□□ -0.05
FAM3A-221ENST00000612856 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
FAM3A-221ENST00000612856 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
FAM3A-221ENST00000612856 TIAM1Q13009 1591 aa14.73□□□□□ -0.05
FAM3A-221ENST00000612856 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
FAM3A-221ENST00000612856 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
FAM3A-221ENST00000612856 CASKIN1Q8WXD9 1431 aa14.69□□□□□ -0.06
FAM3A-221ENST00000612856 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
FAM3A-221ENST00000612856 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
FAM3A-221ENST00000612856 AFAP1Q8N556 730 aa14.68□□□□□ -0.06
FAM3A-221ENST00000612856 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
FAM3A-221ENST00000612856 POGKQ9P215 609 aa14.66□□□□□ -0.06
FAM3A-221ENST00000612856 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
FAM3A-221ENST00000612856 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
FAM3A-221ENST00000612856 NUP155O75694 1391 aa14.65□□□□□ -0.06
FAM3A-221ENST00000612856 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
FAM3A-221ENST00000612856 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
FAM3A-221ENST00000612856 EIF4G2P78344 907 aaKnown RBP eCLIP14.64□□□□□ -0.07
FAM3A-221ENST00000612856 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
FAM3A-221ENST00000612856 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
FAM3A-221ENST00000612856 CDK13Q14004 1512 aaKnown RBP14.63□□□□□ -0.07
FAM3A-221ENST00000612856 NCOA2Q15596 1464 aa14.63□□□□□ -0.07
FAM3A-221ENST00000612856 NEFMP07197 916 aa14.62□□□□□ -0.07
FAM3A-221ENST00000612856 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
FAM3A-221ENST00000612856 RAPGEF3O95398 923 aa14.6□□□□□ -0.07
FAM3A-221ENST00000612856 NPM2Q86SE8 214 aaKnown RBP14.6□□□□□ -0.07
FAM3A-221ENST00000612856 CUL7Q14999 1698 aa14.6□□□□□ -0.07
FAM3A-221ENST00000612856 PRG4Q92954 1404 aaPredicted RBP14.59□□□□□ -0.07
FAM3A-221ENST00000612856 NEUROD2Q15784 382 aa14.58□□□□□ -0.07
FAM3A-221ENST00000612856 MSH5O43196 834 aa14.58□□□□□ -0.08
FAM3A-221ENST00000612856 MPHOSPH9Q99550 1183 aa14.58□□□□□ -0.08
FAM3A-221ENST00000612856 MRS2Q9HD23 443 aa14.58□□□□□ -0.08
FAM3A-221ENST00000612856 EFCAB5A4FU69 1503 aa14.58□□□□□ -0.08
FAM3A-221ENST00000612856 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
FAM3A-221ENST00000612856 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
FAM3A-221ENST00000612856 MYOM3Q5VTT5 1437 aa14.56□□□□□ -0.08
FAM3A-221ENST00000612856 CCDC18Q5T9S5 1454 aa14.55□□□□□ -0.08
FAM3A-221ENST00000612856 PTPRKQ15262 1439 aa14.55□□□□□ -0.08
FAM3A-221ENST00000612856 CC2D1BQ5T0F9 858 aaKnown RBP14.54□□□□□ -0.08
FAM3A-221ENST00000612856 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
FAM3A-221ENST00000612856 IQGAP2Q13576 1575 aa14.52□□□□□ -0.09
FAM3A-221ENST00000612856 ANP32AP39687 249 aaKnown RBP14.51□□□□□ -0.09
FAM3A-221ENST00000612856 ABCA5Q8WWZ7 1642 aa14.51□□□□□ -0.09
FAM3A-221ENST00000612856 PLB1Q6P1J6 1458 aa14.51□□□□□ -0.09
FAM3A-221ENST00000612856 CTTNBP2Q8WZ74 1663 aa14.5□□□□□ -0.09
FAM3A-221ENST00000612856 EPRSP07814 1512 aaKnown RBP14.5□□□□□ -0.09
FAM3A-221ENST00000612856 L3MBTL2Q969R5 705 aa14.49□□□□□ -0.09
FAM3A-221ENST00000612856 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
FAM3A-221ENST00000612856 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
FAM3A-221ENST00000612856 ARXQ96QS3 562 aa14.49□□□□□ -0.09
FAM3A-221ENST00000612856 KANK1Q14678 1352 aa14.49□□□□□ -0.09
FAM3A-221ENST00000612856 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
FAM3A-221ENST00000612856 TRAK1Q9UPV9 953 aa14.48□□□□□ -0.09
FAM3A-221ENST00000612856 ZBTB47Q9UFB7 747 aaPredicted RBP14.48□□□□□ -0.09
FAM3A-221ENST00000612856 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
FAM3A-221ENST00000612856 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
FAM3A-221ENST00000612856 ANKRD30AQ9BXX3 1397 aa14.46□□□□□ -0.09
FAM3A-221ENST00000612856 HSPA5P11021 654 aaKnown RBP14.46□□□□□ -0.1
FAM3A-221ENST00000612856 KIAA0586Q9BVV6 1533 aa14.45□□□□□ -0.1
FAM3A-221ENST00000612856 WDR97A6NE52 1622 aa14.45□□□□□ -0.1
FAM3A-221ENST00000612856 WDR43Q15061 677 aaKnown RBP eCLIP14.45□□□□□ -0.1
FAM3A-221ENST00000612856 MAP3K1Q13233 1512 aa14.45□□□□□ -0.1
FAM3A-221ENST00000612856 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
FAM3A-221ENST00000612856 NAIPQ13075 1403 aa14.44□□□□□ -0.1
FAM3A-221ENST00000612856 KNSTRNQ9Y448 316 aa14.44□□□□□ -0.1
FAM3A-221ENST00000612856 MAPKBP1O60336 1514 aa14.43□□□□□ -0.1
FAM3A-221ENST00000612856 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
FAM3A-221ENST00000612856 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
FAM3A-221ENST00000612856 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
FAM3A-221ENST00000612856 DAXXQ9UER7 740 aaPredicted RBP14.42□□□□□ -0.1
FAM3A-221ENST00000612856 LAS1LQ9Y4W2 734 aaKnown RBP14.42□□□□□ -0.1
FAM3A-221ENST00000612856 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
FAM3A-221ENST00000612856 U2SURPO15042 1029 aaKnown RBP14.41□□□□□ -0.1
FAM3A-221ENST00000612856 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
FAM3A-221ENST00000612856 PBRM1Q86U86 1689 aa14.4□□□□□ -0.1
FAM3A-221ENST00000612856 UACAQ9BZF9 1416 aa14.4□□□□□ -0.1
FAM3A-221ENST00000612856 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
FAM3A-221ENST00000612856 SUPT6HQ7KZ85 1726 aaKnown RBP14.39□□□□□ -0.11
FAM3A-221ENST00000612856 HFM1A2PYH4 1435 aa14.39□□□□□ -0.11
FAM3A-221ENST00000612856 CFAP43Q8NDM7 1665 aa14.39□□□□□ -0.11
FAM3A-221ENST00000612856 HECW1Q76N89 1606 aa14.38□□□□□ -0.11
FAM3A-221ENST00000612856 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
FAM3A-221ENST00000612856 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
FAM3A-221ENST00000612856 TMEM132EQ6IEE7 984 aa14.35□□□□□ -0.11
FAM3A-221ENST00000612856 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
FAM3A-221ENST00000612856 WDR62O43379 1518 aa14.35□□□□□ -0.11
FAM3A-221ENST00000612856 TIMELESSQ9UNS1 1208 aa14.35□□□□□ -0.11
FAM3A-221ENST00000612856 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
FAM3A-221ENST00000612856 SAMD9Q5K651 1589 aa14.35□□□□□ -0.11
FAM3A-221ENST00000612856 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
FAM3A-221ENST00000612856 SCAPERQ9BY12 1400 aa14.34□□□□□ -0.11
FAM3A-221ENST00000612856 CEBPAP49715 358 aaPredicted RBP14.34□□□□□ -0.11
FAM3A-221ENST00000612856 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
FAM3A-221ENST00000612856 EID1Q9Y6B2 187 aa14.34□□□□□ -0.11
FAM3A-221ENST00000612856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms