RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 PLCH2O75038 1416 aa26.14■■□□□ 1.78
LTBP4-233ENST00000612121 EEA1Q15075 1411 aa26.14■■□□□ 1.77
LTBP4-233ENST00000612121 CDK13Q14004 1512 aaKnown RBP26.13■■□□□ 1.77
LTBP4-233ENST00000612121 ARHGEF12Q9NZN5 1544 aa26.13■■□□□ 1.77
LTBP4-233ENST00000612121 ATP10AO60312 1499 aa26.11■■□□□ 1.77
LTBP4-233ENST00000612121 C9orf84Q5VXU9 1444 aa26.08■■□□□ 1.77
LTBP4-233ENST00000612121 PREX1Q8TCU6 1659 aa26.08■■□□□ 1.77
LTBP4-233ENST00000612121 CEBPAP49715 358 aaPredicted RBP26.05■■□□□ 1.76
LTBP4-233ENST00000612121 EFCAB2Q5VUJ9 269 aa26.03■■□□□ 1.76
LTBP4-233ENST00000612121 STRCQ7RTU9 1775 aa26.01■■□□□ 1.75
LTBP4-233ENST00000612121 MYO5CQ9NQX4 1742 aa26■■□□□ 1.75
LTBP4-233ENST00000612121 DMRT2Q9Y5R5 561 aa25.99■■□□□ 1.75
LTBP4-233ENST00000612121 ILDR2Q71H61 639 aa25.97■■□□□ 1.75
LTBP4-233ENST00000612121 SETD1BQ9UPS6 1966 aaKnown RBP25.96■■□□□ 1.75
LTBP4-233ENST00000612121 ZNF518AQ6AHZ1 1483 aa25.96■■□□□ 1.75
LTBP4-233ENST00000612121 DISP3Q9P2K9 1392 aa25.95■■□□□ 1.75
LTBP4-233ENST00000612121 UHRF1BP1Q6BDS2 1440 aa25.95■■□□□ 1.74
LTBP4-233ENST00000612121 AFAP1Q8N556 730 aa25.94■■□□□ 1.74
LTBP4-233ENST00000612121 KDM5CP41229 1560 aa25.94■■□□□ 1.74
LTBP4-233ENST00000612121 KIF14Q15058 1648 aa25.93■■□□□ 1.74
LTBP4-233ENST00000612121 ATP1B4Q9UN42 357 aaPredicted RBP25.93■■□□□ 1.74
LTBP4-233ENST00000612121 FMN1Q68DA7 1419 aa25.92■■□□□ 1.74
LTBP4-233ENST00000612121 CDK11AQ9UQ88 783 aaPredicted RBP25.92■■□□□ 1.74
LTBP4-233ENST00000612121 DIP2CQ9Y2E4 1556 aa25.89■■□□□ 1.73
LTBP4-233ENST00000612121 ARHGAP5Q13017 1502 aa25.88■■□□□ 1.73
LTBP4-233ENST00000612121 REREQ9P2R6 1566 aa25.88■■□□□ 1.73
LTBP4-233ENST00000612121 SOCS7O14512 581 aa25.88■■□□□ 1.73
LTBP4-233ENST00000612121 TROQ12816 1431 aaPredicted RBP25.88■■□□□ 1.73
LTBP4-233ENST00000612121 PTPRTO14522 1441 aa25.87■■□□□ 1.73
LTBP4-233ENST00000612121 ARHGAP35Q9NRY4 1499 aa25.85■■□□□ 1.73
LTBP4-233ENST00000612121 C3P01024 1663 aa25.84■■□□□ 1.73
LTBP4-233ENST00000612121 MYT1LQ9UL68 1186 aa25.84■■□□□ 1.73
LTBP4-233ENST00000612121 MLH3Q9UHC1 1453 aa25.83■■□□□ 1.73
LTBP4-233ENST00000612121 ABCA6Q8N139 1617 aa25.82■■□□□ 1.72
LTBP4-233ENST00000612121 CLIP1P30622 1438 aa25.8■■□□□ 1.72
LTBP4-233ENST00000612121 CDC42BPBQ9Y5S2 1711 aa25.8■■□□□ 1.72
LTBP4-233ENST00000612121 AGLP35573 1532 aa25.8■■□□□ 1.72
LTBP4-233ENST00000612121 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
LTBP4-233ENST00000612121 LTBP4Q8N2S1 1624 aa25.79■■□□□ 1.72
LTBP4-233ENST00000612121 TRAPPC8Q9Y2L5 1435 aa25.78■■□□□ 1.72
LTBP4-233ENST00000612121 LRRIQ1Q96JM4 1722 aa25.77■■□□□ 1.72
LTBP4-233ENST00000612121 EHMT2Q96KQ7 1210 aa25.77■■□□□ 1.72
LTBP4-233ENST00000612121 SPATA31D1Q6ZQQ2 1576 aa25.75■■□□□ 1.71
LTBP4-233ENST00000612121 ESF1Q9H501 851 aaKnown RBP25.75■■□□□ 1.71
LTBP4-233ENST00000612121 ABCC1P33527 1531 aa25.73■■□□□ 1.71
LTBP4-233ENST00000612121 NCOA1Q15788 1441 aa25.72■■□□□ 1.71
LTBP4-233ENST00000612121 IQSEC2Q5JU85 1478 aa25.72■■□□□ 1.71
LTBP4-233ENST00000612121 PREX2Q70Z35 1606 aa25.71■■□□□ 1.71
LTBP4-233ENST00000612121 CNTLNQ9NXG0 1405 aa25.71■■□□□ 1.71
LTBP4-233ENST00000612121 ITSN2Q9NZM3 1697 aa25.71■■□□□ 1.71
LTBP4-233ENST00000612121 KIDINS220Q9ULH0 1771 aa25.7■■□□□ 1.7
LTBP4-233ENST00000612121 NPATQ14207 1427 aa25.64■■□□□ 1.7
LTBP4-233ENST00000612121 CAMSAP1Q5T5Y3 1602 aa25.63■■□□□ 1.69
LTBP4-233ENST00000612121 MROH2AA6NES4 1674 aa25.61■■□□□ 1.69
LTBP4-233ENST00000612121 CDC42BPAQ5VT25 1732 aa25.61■■□□□ 1.69
LTBP4-233ENST00000612121 CCDC18Q5T9S5 1454 aa25.6■■□□□ 1.69
LTBP4-233ENST00000612121 ZMYM3Q14202 1370 aa25.6■■□□□ 1.69
LTBP4-233ENST00000612121 CASKIN1Q8WXD9 1431 aa25.6■■□□□ 1.69
LTBP4-233ENST00000612121 SAMD9LQ8IVG5 1584 aa25.59■■□□□ 1.69
LTBP4-233ENST00000612121 NCKAP5LQ9HCH0 1330 aa25.57■■□□□ 1.68
LTBP4-233ENST00000612121 ZNF335Q9H4Z2 1342 aaPredicted RBP25.55■■□□□ 1.68
LTBP4-233ENST00000612121 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
LTBP4-233ENST00000612121 ZNF777Q9ULD5 760 aaPredicted RBP25.52■■□□□ 1.68
LTBP4-233ENST00000612121 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
LTBP4-233ENST00000612121 UBAP1LF5GYI3 381 aa25.51■■□□□ 1.67
LTBP4-233ENST00000612121 SYCP2Q9BX26 1530 aa25.51■■□□□ 1.67
LTBP4-233ENST00000612121 PLA2R1Q13018 1463 aa25.5■■□□□ 1.67
LTBP4-233ENST00000612121 ZNF142P52746 1687 aaPredicted RBP25.49■■□□□ 1.67
LTBP4-233ENST00000612121 GPATCH8Q9UKJ3 1502 aaKnown RBP25.49■■□□□ 1.67
LTBP4-233ENST00000612121 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
LTBP4-233ENST00000612121 PKD2Q13563 968 aa25.49■■□□□ 1.67
LTBP4-233ENST00000612121 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
LTBP4-233ENST00000612121 MYO3AQ8NEV4 1616 aa25.48■■□□□ 1.67
LTBP4-233ENST00000612121 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
LTBP4-233ENST00000612121 PTPRKQ15262 1439 aa25.47■■□□□ 1.67
LTBP4-233ENST00000612121 PLXNC1O60486 1568 aa25.47■■□□□ 1.67
LTBP4-233ENST00000612121 ATP7AQ04656 1500 aa25.47■■□□□ 1.67
LTBP4-233ENST00000612121 CEP170BQ9Y4F5 1589 aaPredicted RBP25.45■■□□□ 1.66
LTBP4-233ENST00000612121 A2MP01023 1474 aa25.45■■□□□ 1.66
LTBP4-233ENST00000612121 KIAA1107Q9UPP5 1409 aa25.45■■□□□ 1.66
LTBP4-233ENST00000612121 FYCO1Q9BQS8 1478 aa25.44■■□□□ 1.66
LTBP4-233ENST00000612121 INO80Q9ULG1 1556 aaPredicted RBP25.44■■□□□ 1.66
LTBP4-233ENST00000612121 GGT6Q6P531 493 aa25.4■■□□□ 1.66
LTBP4-233ENST00000612121 PLEKHH2Q8IVE3 1493 aa25.4■■□□□ 1.66
LTBP4-233ENST00000612121 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
LTBP4-233ENST00000612121 CFDP1Q9UEE9 299 aaPredicted RBP25.38■■□□□ 1.65
LTBP4-233ENST00000612121 PPP6R1Q9UPN7 881 aa25.38■■□□□ 1.65
LTBP4-233ENST00000612121 A2ML1A8K2U0 1454 aa25.34■■□□□ 1.65
LTBP4-233ENST00000612121 CCNB3Q8WWL7 1395 aa25.33■■□□□ 1.65
LTBP4-233ENST00000612121 DNMT1P26358 1616 aaKnown RBP25.33■■□□□ 1.65
LTBP4-233ENST00000612121 ADGBQ8N7X0 1667 aa25.32■■□□□ 1.64
LTBP4-233ENST00000612121 HSPA1LP34931 641 aa25.29■■□□□ 1.64
LTBP4-233ENST00000612121 ZNF644Q9H582 1327 aaPredicted RBP25.26■■□□□ 1.63
LTBP4-233ENST00000612121 MBD5Q9P267 1494 aa25.26■■□□□ 1.63
LTBP4-233ENST00000612121 CPS1P31327 1500 aa25.25■■□□□ 1.63
LTBP4-233ENST00000612121 MED1Q15648 1581 aaPredicted RBP25.25■■□□□ 1.63
LTBP4-233ENST00000612121 NEURL4Q96JN8 1562 aa25.25■■□□□ 1.63
LTBP4-233ENST00000612121 SCAF1Q9H7N4 1312 aaKnown RBP25.24■■□□□ 1.63
LTBP4-233ENST00000612121 TOM1O60784 492 aa25.24■■□□□ 1.63
LTBP4-233ENST00000612121 PIP4K2BP78356 416 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms