RNA–Protein interactions for RNA: ENST00000611967.4

PCSK6-215, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best) BASIC

Gene PCSK6, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-215ENST00000611967 NEFMP07197 916 aa29.47■■■□□ 2.31
PCSK6-215ENST00000611967 L3MBTL2Q969R5 705 aa29.47■■■□□ 2.31
PCSK6-215ENST00000611967 JPH4Q96JJ6 628 aa29.47■■■□□ 2.31
PCSK6-215ENST00000611967 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
PCSK6-215ENST00000611967 CUL7Q14999 1698 aa29.39■■■□□ 2.3
PCSK6-215ENST00000611967 UACAQ9BZF9 1416 aa29.39■■■□□ 2.29
PCSK6-215ENST00000611967 CNTLNQ9NXG0 1405 aa29.38■■■□□ 2.29
PCSK6-215ENST00000611967 EIF5BO60841 1220 aaKnown RBP29.36■■■□□ 2.29
PCSK6-215ENST00000611967 FGD6Q6ZV73 1430 aa29.34■■■□□ 2.29
PCSK6-215ENST00000611967 NUDCQ9Y266 331 aa29.34■■■□□ 2.29
PCSK6-215ENST00000611967 PTPRKQ15262 1439 aa29.33■■■□□ 2.29
PCSK6-215ENST00000611967 ZNF777Q9ULD5 760 aaPredicted RBP29.32■■■□□ 2.28
PCSK6-215ENST00000611967 TMC1Q8TDI8 760 aa29.32■■■□□ 2.28
PCSK6-215ENST00000611967 CCDC7Q96M83 1385 aa29.32■■■□□ 2.28
PCSK6-215ENST00000611967 GRIN2AQ12879 1464 aa29.31■■■□□ 2.28
PCSK6-215ENST00000611967 PCF11O94913 1555 aaKnown RBP29.3■■■□□ 2.28
PCSK6-215ENST00000611967 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
PCSK6-215ENST00000611967 MPHOSPH9Q99550 1183 aa29.27■■■□□ 2.28
PCSK6-215ENST00000611967 KIF7Q2M1P5 1343 aa29.26■■■□□ 2.27
PCSK6-215ENST00000611967 FMN1Q68DA7 1419 aa29.25■■■□□ 2.27
PCSK6-215ENST00000611967 NBPF8Q3BBV2 869 aa29.24■■■□□ 2.27
PCSK6-215ENST00000611967 MAP3K1Q13233 1512 aa29.24■■■□□ 2.27
PCSK6-215ENST00000611967 EXOC6Q8TAG9 804 aa29.21■■■□□ 2.27
PCSK6-215ENST00000611967 HFM1A2PYH4 1435 aa29.21■■■□□ 2.27
PCSK6-215ENST00000611967 NAIPQ13075 1403 aa29.21■■■□□ 2.27
PCSK6-215ENST00000611967 SYNJ2O15056 1496 aa29.2■■■□□ 2.26
PCSK6-215ENST00000611967 IQGAP2Q13576 1575 aa29.19■■■□□ 2.26
PCSK6-215ENST00000611967 CTTNBP2Q8WZ74 1663 aa29.19■■■□□ 2.26
PCSK6-215ENST00000611967 DAXXQ9UER7 740 aaPredicted RBP29.19■■■□□ 2.26
PCSK6-215ENST00000611967 SKAP1Q86WV1 359 aa29.17■■■□□ 2.26
PCSK6-215ENST00000611967 SLC4A1APQ9BWU0 796 aaKnown RBP29.15■■■□□ 2.26
PCSK6-215ENST00000611967 PDE4AP27815 886 aa29.15■■■□□ 2.26
PCSK6-215ENST00000611967 SLC4A3P48751 1232 aa29.15■■■□□ 2.26
PCSK6-215ENST00000611967 CDK13Q14004 1512 aaKnown RBP29.14■■■□□ 2.26
PCSK6-215ENST00000611967 BRPF3Q9ULD4 1205 aa29.14■■■□□ 2.25
PCSK6-215ENST00000611967 PLB1Q6P1J6 1458 aa29.1■■■□□ 2.25
PCSK6-215ENST00000611967 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
PCSK6-215ENST00000611967 KIAA0586Q9BVV6 1533 aa29.09■■■□□ 2.25
PCSK6-215ENST00000611967 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
PCSK6-215ENST00000611967 SMG6Q86US8 1419 aaKnown RBP29.08■■■□□ 2.25
PCSK6-215ENST00000611967 PTPN23Q9H3S7 1636 aa29.08■■■□□ 2.25
PCSK6-215ENST00000611967 PRG4Q92954 1404 aaPredicted RBP29.07■■■□□ 2.24
PCSK6-215ENST00000611967 CASKIN1Q8WXD9 1431 aa29.06■■■□□ 2.24
PCSK6-215ENST00000611967 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
PCSK6-215ENST00000611967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.05■■■□□ 2.24
PCSK6-215ENST00000611967 PLIN1O60240 522 aa29.04■■■□□ 2.24
PCSK6-215ENST00000611967 NCOA1Q15788 1441 aa29.04■■■□□ 2.24
PCSK6-215ENST00000611967 PPM1GO15355 546 aaPredicted RBP29.02■■■□□ 2.24
PCSK6-215ENST00000611967 FYCO1Q9BQS8 1478 aa29.02■■■□□ 2.24
PCSK6-215ENST00000611967 TCERG1O14776 1098 aaKnown RBP29.01■■■□□ 2.23
PCSK6-215ENST00000611967 NCOA2Q15596 1464 aa29.01■■■□□ 2.23
PCSK6-215ENST00000611967 RCAN3Q9UKA8 241 aa29■■■□□ 2.23
PCSK6-215ENST00000611967 MYOM3Q5VTT5 1437 aa29■■■□□ 2.23
PCSK6-215ENST00000611967 EFCAB5A4FU69 1503 aa29■■■□□ 2.23
PCSK6-215ENST00000611967 RRP1P56182 461 aaKnown RBP29■■■□□ 2.23
PCSK6-215ENST00000611967 KDM2AQ9Y2K7 1162 aa29■■■□□ 2.23
PCSK6-215ENST00000611967 DISP1Q96F81 1524 aa28.98■■■□□ 2.23
PCSK6-215ENST00000611967 CARMIL2Q6F5E8 1435 aa28.97■■■□□ 2.23
PCSK6-215ENST00000611967 CFAP43Q8NDM7 1665 aa28.96■■■□□ 2.23
PCSK6-215ENST00000611967 KDM5BQ9UGL1 1544 aa28.95■■■□□ 2.22
PCSK6-215ENST00000611967 PNISRQ8TF01 805 aaKnown RBP28.94■■■□□ 2.22
PCSK6-215ENST00000611967 PTPRGP23470 1445 aa28.93■■■□□ 2.22
PCSK6-215ENST00000611967 BACH2Q9BYV9 841 aa28.92■■■□□ 2.22
PCSK6-215ENST00000611967 PLEKHD1A6NEE1 506 aa28.92■■■□□ 2.22
PCSK6-215ENST00000611967 USP35Q9P2H5 1018 aa28.9■■■□□ 2.22
PCSK6-215ENST00000611967 GSE1Q14687 1217 aa28.89■■■□□ 2.21
PCSK6-215ENST00000611967 CDCA7LQ96GN5 454 aa28.87■■■□□ 2.21
PCSK6-215ENST00000611967 SAMD9Q5K651 1589 aa28.87■■■□□ 2.21
PCSK6-215ENST00000611967 EPRSP07814 1512 aaKnown RBP28.86■■■□□ 2.21
PCSK6-215ENST00000611967 NFKBIBQ15653 356 aa28.85■■■□□ 2.21
PCSK6-215ENST00000611967 ARXQ96QS3 562 aa28.85■■■□□ 2.21
PCSK6-215ENST00000611967 ERCC6L2Q5T890 1561 aa28.85■■■□□ 2.21
PCSK6-215ENST00000611967 CHD1O14646 1710 aa28.84■■■□□ 2.21
PCSK6-215ENST00000611967 CARD11Q9BXL7 1154 aa28.84■■■□□ 2.21
PCSK6-215ENST00000611967 CFDP1Q9UEE9 299 aaPredicted RBP28.84■■■□□ 2.21
PCSK6-215ENST00000611967 RNF123Q5XPI4 1314 aa28.84■■■□□ 2.21
PCSK6-215ENST00000611967 FRAT1Q92837 279 aaPredicted RBP28.84■■■□□ 2.21
PCSK6-215ENST00000611967 NUP160Q12769 1436 aa28.83■■■□□ 2.21
PCSK6-215ENST00000611967 USP47Q96K76 1375 aa28.82■■■□□ 2.2
PCSK6-215ENST00000611967 MAGI3Q5TCQ9 1506 aa28.82■■■□□ 2.2
PCSK6-215ENST00000611967 DDRGK1Q96HY6 314 aa28.82■■■□□ 2.2
PCSK6-215ENST00000611967 KIAA0556O60303 1618 aa28.82■■■□□ 2.2
PCSK6-215ENST00000611967 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
PCSK6-215ENST00000611967 CRBNQ96SW2 442 aa28.79■■■□□ 2.2
PCSK6-215ENST00000611967 RGS3P49796 1198 aa28.78■■■□□ 2.2
PCSK6-215ENST00000611967 UGGT2Q9NYU1 1516 aa28.78■■■□□ 2.2
PCSK6-215ENST00000611967 NUP153P49790 1475 aaKnown RBP28.77■■■□□ 2.2
PCSK6-215ENST00000611967 DHX29Q7Z478 1369 aaKnown RBP28.74■■■□□ 2.19
PCSK6-215ENST00000611967 LRRIQ1Q96JM4 1722 aa28.74■■■□□ 2.19
PCSK6-215ENST00000611967 DENND4BO75064 1496 aaPredicted RBP28.73■■■□□ 2.19
PCSK6-215ENST00000611967 CC2D1BQ5T0F9 858 aaKnown RBP28.73■■■□□ 2.19
PCSK6-215ENST00000611967 ST20-MTHFSA0A0A6YYL1 179 aa28.72■■■□□ 2.19
PCSK6-215ENST00000611967 ANKRD30BQ9BXX2 1392 aa28.72■■■□□ 2.19
PCSK6-215ENST00000611967 CYB5RLQ6IPT4 315 aa28.71■■■□□ 2.19
PCSK6-215ENST00000611967 KDM6BO15054 1643 aa28.71■■■□□ 2.19
PCSK6-215ENST00000611967 HNRNPMP52272 730 aaKnown RBP eCLIP28.71■■■□□ 2.191e-6■■■□□ 18.4
PCSK6-215ENST00000611967 PKD2Q13563 968 aa28.71■■■□□ 2.19
PCSK6-215ENST00000611967 MS4A1P11836 297 aa28.71■■■□□ 2.19
PCSK6-215ENST00000611967 FRAT2O75474 233 aaPredicted RBP28.68■■■□□ 2.18
PCSK6-215ENST00000611967 WASHC2CQ9Y4E1 1318 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms