RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
SRRT-213ENST00000611405 KDM6BO15054 1643 aa17.04■□□□□ 0.32
SRRT-213ENST00000611405 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
SRRT-213ENST00000611405 ZNF644Q9H582 1327 aaPredicted RBP17.03■□□□□ 0.32
SRRT-213ENST00000611405 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
SRRT-213ENST00000611405 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.31
SRRT-213ENST00000611405 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
SRRT-213ENST00000611405 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
SRRT-213ENST00000611405 DENND4BO75064 1496 aaPredicted RBP17.01■□□□□ 0.31
SRRT-213ENST00000611405 KIF14Q15058 1648 aa17■□□□□ 0.31
SRRT-213ENST00000611405 ATP10BO94823 1461 aa17■□□□□ 0.31
SRRT-213ENST00000611405 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
SRRT-213ENST00000611405 PTPRGP23470 1445 aa16.98■□□□□ 0.31
SRRT-213ENST00000611405 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.31
SRRT-213ENST00000611405 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
SRRT-213ENST00000611405 CHD1O14646 1710 aa16.95■□□□□ 0.3
SRRT-213ENST00000611405 ADGRL2O95490 1459 aa16.94■□□□□ 0.3
SRRT-213ENST00000611405 ADGBQ8N7X0 1667 aa16.94■□□□□ 0.3
SRRT-213ENST00000611405 NCOA1Q15788 1441 aa16.93■□□□□ 0.3
SRRT-213ENST00000611405 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
SRRT-213ENST00000611405 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
SRRT-213ENST00000611405 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
SRRT-213ENST00000611405 CROCC2H7BZ55 1655 aa16.91■□□□□ 0.3
SRRT-213ENST00000611405 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
SRRT-213ENST00000611405 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
SRRT-213ENST00000611405 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
SRRT-213ENST00000611405 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
SRRT-213ENST00000611405 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
SRRT-213ENST00000611405 HIRIP3Q9BW71 556 aaPredicted RBP16.87■□□□□ 0.29
SRRT-213ENST00000611405 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
SRRT-213ENST00000611405 FOXD1Q16676 465 aa16.86■□□□□ 0.29
SRRT-213ENST00000611405 PZPP20742 1482 aa16.85■□□□□ 0.29
SRRT-213ENST00000611405 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
SRRT-213ENST00000611405 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.29
SRRT-213ENST00000611405 ARHGEF5Q12774 1597 aa16.82■□□□□ 0.28
SRRT-213ENST00000611405 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
SRRT-213ENST00000611405 TSPY4P0CV99 314 aa16.82■□□□□ 0.28
SRRT-213ENST00000611405 TSPY10P0CW01 314 aa16.82■□□□□ 0.28
SRRT-213ENST00000611405 KIAA1107Q9UPP5 1409 aa16.8■□□□□ 0.28
SRRT-213ENST00000611405 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
SRRT-213ENST00000611405 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
SRRT-213ENST00000611405 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
SRRT-213ENST00000611405 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
SRRT-213ENST00000611405 ANP32CO43423 234 aa16.79■□□□□ 0.28
SRRT-213ENST00000611405 PREX2Q70Z35 1606 aa16.79■□□□□ 0.28
SRRT-213ENST00000611405 MBD5Q9P267 1494 aa16.78■□□□□ 0.28
SRRT-213ENST00000611405 EIF4G2P78344 907 aaKnown RBP eCLIP16.78■□□□□ 0.28
SRRT-213ENST00000611405 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
SRRT-213ENST00000611405 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.27
SRRT-213ENST00000611405 CLASP1Q7Z460 1538 aa16.77■□□□□ 0.27
SRRT-213ENST00000611405 HNRNPMP52272 730 aaKnown RBP eCLIP16.76■□□□□ 0.27
SRRT-213ENST00000611405 CCDC141Q6ZP82 1450 aa16.76■□□□□ 0.27
SRRT-213ENST00000611405 SAMD9LQ8IVG5 1584 aa16.75■□□□□ 0.27
SRRT-213ENST00000611405 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
SRRT-213ENST00000611405 PKD2Q13563 968 aa16.74■□□□□ 0.27
SRRT-213ENST00000611405 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
SRRT-213ENST00000611405 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
SRRT-213ENST00000611405 KIF15Q9NS87 1388 aa16.74■□□□□ 0.27
SRRT-213ENST00000611405 NUP155O75694 1391 aa16.73■□□□□ 0.27
SRRT-213ENST00000611405 UHRF1BP1LA0JNW5 1464 aa16.72■□□□□ 0.27
SRRT-213ENST00000611405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.72■□□□□ 0.275e-6■■■■□ 19.7
SRRT-213ENST00000611405 NBPF8Q3BBV2 869 aa16.72■□□□□ 0.27
SRRT-213ENST00000611405 TTC37Q6PGP7 1564 aa16.71■□□□□ 0.27
SRRT-213ENST00000611405 PLEKHH2Q8IVE3 1493 aa16.7■□□□□ 0.26
SRRT-213ENST00000611405 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
SRRT-213ENST00000611405 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
SRRT-213ENST00000611405 MAST1Q9Y2H9 1570 aa16.69■□□□□ 0.26
SRRT-213ENST00000611405 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
SRRT-213ENST00000611405 SYCP2Q9BX26 1530 aa16.67■□□□□ 0.26
SRRT-213ENST00000611405 ZCCHC11Q5TAX3 1644 aaKnown RBP16.65■□□□□ 0.26
SRRT-213ENST00000611405 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
SRRT-213ENST00000611405 CCDC7Q96M83 1385 aa16.64■□□□□ 0.25
SRRT-213ENST00000611405 PLCH2O75038 1416 aa16.63■□□□□ 0.25
SRRT-213ENST00000611405 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
SRRT-213ENST00000611405 CNTLNQ9NXG0 1405 aa16.62■□□□□ 0.25
SRRT-213ENST00000611405 UHRF1BP1Q6BDS2 1440 aa16.61■□□□□ 0.25
SRRT-213ENST00000611405 PLXNC1O60486 1568 aa16.61■□□□□ 0.25
SRRT-213ENST00000611405 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
SRRT-213ENST00000611405 ARHGEF12Q9NZN5 1544 aa16.61■□□□□ 0.25
SRRT-213ENST00000611405 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
SRRT-213ENST00000611405 C11orf95C9JLR9 678 aaPredicted RBP16.59■□□□□ 0.25
SRRT-213ENST00000611405 UNC13BO14795 1591 aa16.58■□□□□ 0.25
SRRT-213ENST00000611405 DUOX2Q9NRD8 1548 aa16.56■□□□□ 0.24
SRRT-213ENST00000611405 RALGAPBQ86X10 1494 aa16.56■□□□□ 0.24
SRRT-213ENST00000611405 POLR1AO95602 1720 aaPredicted RBP16.55■□□□□ 0.24
SRRT-213ENST00000611405 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
SRRT-213ENST00000611405 KIF7Q2M1P5 1343 aa16.55■□□□□ 0.24
SRRT-213ENST00000611405 ABCC1P33527 1531 aa16.55■□□□□ 0.24
SRRT-213ENST00000611405 USP47Q96K76 1375 aa16.54■□□□□ 0.24
SRRT-213ENST00000611405 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
SRRT-213ENST00000611405 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
SRRT-213ENST00000611405 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
SRRT-213ENST00000611405 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.23
SRRT-213ENST00000611405 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.23
SRRT-213ENST00000611405 KDM5CP41229 1560 aa16.51■□□□□ 0.23
SRRT-213ENST00000611405 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
SRRT-213ENST00000611405 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
SRRT-213ENST00000611405 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
SRRT-213ENST00000611405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.231e-7■■■□□ 18.8
SRRT-213ENST00000611405 TRAPPC8Q9Y2L5 1435 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms