RNA–Protein interactions for RNA: ENST00000611279.4

MTHFD1L-211, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTHFD1L, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-211ENST00000611279 UBE2Q2Q8WVN8 375 aa22.87■■□□□ 1.25
MTHFD1L-211ENST00000611279 CDCA7LQ96GN5 454 aa22.86■■□□□ 1.25
MTHFD1L-211ENST00000611279 NAIPQ13075 1403 aa22.85■■□□□ 1.25
MTHFD1L-211ENST00000611279 FRAT2O75474 233 aaPredicted RBP22.83■■□□□ 1.25
MTHFD1L-211ENST00000611279 HFM1A2PYH4 1435 aa22.83■■□□□ 1.25
MTHFD1L-211ENST00000611279 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
MTHFD1L-211ENST00000611279 CRBNQ96SW2 442 aa22.8■■□□□ 1.24
MTHFD1L-211ENST00000611279 PCF11O94913 1555 aaKnown RBP22.79■■□□□ 1.24
MTHFD1L-211ENST00000611279 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
MTHFD1L-211ENST00000611279 ZNF777Q9ULD5 760 aaPredicted RBP22.76■■□□□ 1.23
MTHFD1L-211ENST00000611279 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
MTHFD1L-211ENST00000611279 WASHC2CQ9Y4E1 1318 aa22.75■■□□□ 1.23
MTHFD1L-211ENST00000611279 CC2D1BQ5T0F9 858 aaKnown RBP22.74■■□□□ 1.23
MTHFD1L-211ENST00000611279 SLKQ9H2G2 1235 aaPredicted RBP22.73■■□□□ 1.23
MTHFD1L-211ENST00000611279 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
MTHFD1L-211ENST00000611279 MS4A1P11836 297 aa22.72■■□□□ 1.23
MTHFD1L-211ENST00000611279 ARID4BQ4LE39 1312 aaPredicted RBP22.7■■□□□ 1.22
MTHFD1L-211ENST00000611279 NAP1L5Q96NT1 182 aaPredicted RBP22.7■■□□□ 1.22
MTHFD1L-211ENST00000611279 MAP3K1Q13233 1512 aa22.69■■□□□ 1.22
MTHFD1L-211ENST00000611279 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
MTHFD1L-211ENST00000611279 RNF123Q5XPI4 1314 aa22.69■■□□□ 1.22
MTHFD1L-211ENST00000611279 NCOA2Q15596 1464 aa22.69■■□□□ 1.22
MTHFD1L-211ENST00000611279 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
MTHFD1L-211ENST00000611279 USP47Q96K76 1375 aa22.68■■□□□ 1.22
MTHFD1L-211ENST00000611279 CFTRP13569 1480 aa22.67■■□□□ 1.22
MTHFD1L-211ENST00000611279 C20orf194Q5TEA3 1177 aa22.66■■□□□ 1.22
MTHFD1L-211ENST00000611279 SPRYD3Q8NCJ5 442 aa22.66■■□□□ 1.22
MTHFD1L-211ENST00000611279 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
MTHFD1L-211ENST00000611279 ST20-MTHFSA0A0A6YYL1 179 aa22.65■■□□□ 1.22
MTHFD1L-211ENST00000611279 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
MTHFD1L-211ENST00000611279 RSPH6AQ9H0K4 717 aa22.64■■□□□ 1.22
MTHFD1L-211ENST00000611279 GZF1Q9H116 711 aaPredicted RBP22.64■■□□□ 1.21
MTHFD1L-211ENST00000611279 DCAF11Q8TEB1 546 aa22.63■■□□□ 1.21
MTHFD1L-211ENST00000611279 CASKIN1Q8WXD9 1431 aa22.63■■□□□ 1.21
MTHFD1L-211ENST00000611279 VSIG10Q8N0Z9 540 aa22.63■■□□□ 1.21
MTHFD1L-211ENST00000611279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.61■■□□□ 1.218e-8■■■■■ 33
MTHFD1L-211ENST00000611279 ZNF644Q9H582 1327 aaPredicted RBP22.6■■□□□ 1.21
MTHFD1L-211ENST00000611279 POGKQ9P215 609 aa22.59■■□□□ 1.21
MTHFD1L-211ENST00000611279 GLIPR1L2Q4G1C9 344 aa22.59■■□□□ 1.21
MTHFD1L-211ENST00000611279 PKD2Q13563 968 aa22.58■■□□□ 1.21
MTHFD1L-211ENST00000611279 MYBBP1AQ9BQG0 1328 aaKnown RBP22.58■■□□□ 1.21
MTHFD1L-211ENST00000611279 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.2
MTHFD1L-211ENST00000611279 PKNOX2Q96KN3 472 aa22.57■■□□□ 1.2
MTHFD1L-211ENST00000611279 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
MTHFD1L-211ENST00000611279 RGL3Q3MIN7 710 aa22.57■■□□□ 1.2
MTHFD1L-211ENST00000611279 DHX29Q7Z478 1369 aaKnown RBP22.56■■□□□ 1.2
MTHFD1L-211ENST00000611279 KDM5BQ9UGL1 1544 aa22.56■■□□□ 1.2
MTHFD1L-211ENST00000611279 FAM161AQ3B820 660 aa22.56■■□□□ 1.2
MTHFD1L-211ENST00000611279 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
MTHFD1L-211ENST00000611279 NLRP13Q86W25 1043 aa22.52■■□□□ 1.2
MTHFD1L-211ENST00000611279 FAM43AQ8N2R8 423 aa22.52■■□□□ 1.2
MTHFD1L-211ENST00000611279 KIF15Q9NS87 1388 aa22.52■■□□□ 1.19
MTHFD1L-211ENST00000611279 CANXP27824 592 aaKnown RBP22.51■■□□□ 1.19
MTHFD1L-211ENST00000611279 RALBP1Q15311 655 aa22.51■■□□□ 1.19
MTHFD1L-211ENST00000611279 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
MTHFD1L-211ENST00000611279 ANKRD30BQ9BXX2 1392 aa22.48■■□□□ 1.19
MTHFD1L-211ENST00000611279 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
MTHFD1L-211ENST00000611279 PNNQ9H307 717 aaKnown RBP22.46■■□□□ 1.19
MTHFD1L-211ENST00000611279 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.18
MTHFD1L-211ENST00000611279 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
MTHFD1L-211ENST00000611279 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
MTHFD1L-211ENST00000611279 CENPQQ7L2Z9 268 aaPredicted RBP22.44■■□□□ 1.18
MTHFD1L-211ENST00000611279 RRAGDQ9NQL2 400 aaPredicted RBP22.44■■□□□ 1.18
MTHFD1L-211ENST00000611279 CFAP43Q8NDM7 1665 aa22.44■■□□□ 1.18
MTHFD1L-211ENST00000611279 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.42■■□□□ 1.18
MTHFD1L-211ENST00000611279 BECN1Q14457 450 aa22.42■■□□□ 1.18
MTHFD1L-211ENST00000611279 BRD4O60885 1362 aaPredicted RBP22.41■■□□□ 1.18
MTHFD1L-211ENST00000611279 HSP90AA2PQ14568 343 aaPredicted RBP22.41■■□□□ 1.18
MTHFD1L-211ENST00000611279 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
MTHFD1L-211ENST00000611279 NESP48681 1621 aa22.4■■□□□ 1.18
MTHFD1L-211ENST00000611279 C8orf34Q49A92 452 aa22.4■■□□□ 1.18
MTHFD1L-211ENST00000611279 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
MTHFD1L-211ENST00000611279 SPATA31E1Q6ZUB1 1445 aa22.39■■□□□ 1.17
MTHFD1L-211ENST00000611279 KDM6BO15054 1643 aa22.38■■□□□ 1.17
MTHFD1L-211ENST00000611279 HSP90AA1P07900 732 aaKnown RBP22.38■■□□□ 1.17
MTHFD1L-211ENST00000611279 RPRD2Q5VT52 1461 aaKnown RBP22.38■■□□□ 1.17
MTHFD1L-211ENST00000611279 ADAMTS8Q9UP79 889 aa22.37■■□□□ 1.17
MTHFD1L-211ENST00000611279 CFDP1Q9UEE9 299 aaPredicted RBP22.36■■□□□ 1.17
MTHFD1L-211ENST00000611279 CADPSQ9ULU8 1353 aa22.36■■□□□ 1.17
MTHFD1L-211ENST00000611279 L1TD1Q5T7N2 865 aaKnown RBP22.36■■□□□ 1.17
MTHFD1L-211ENST00000611279 UPF2Q9HAU5 1272 aaKnown RBP22.36■■□□□ 1.17
MTHFD1L-211ENST00000611279 ZMYND15Q9H091 742 aa22.35■■□□□ 1.17
MTHFD1L-211ENST00000611279 ROCK2O75116 1388 aaKnown RBP22.34■■□□□ 1.17
MTHFD1L-211ENST00000611279 PANK3Q9H999 370 aa22.34■■□□□ 1.17
MTHFD1L-211ENST00000611279 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
MTHFD1L-211ENST00000611279 GOLGA6L3A6NEY3 463 aa22.33■■□□□ 1.17
MTHFD1L-211ENST00000611279 NEUROD2Q15784 382 aa22.33■■□□□ 1.16
MTHFD1L-211ENST00000611279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.32■■□□□ 1.164e-6■■■□□ 16
MTHFD1L-211ENST00000611279 PANK2Q9BZ23 570 aa22.32■■□□□ 1.16
MTHFD1L-211ENST00000611279 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
MTHFD1L-211ENST00000611279 SEC24BO95487 1268 aa22.3■■□□□ 1.16
MTHFD1L-211ENST00000611279 MIA2Q96PC5 1412 aa22.29■■□□□ 1.16
MTHFD1L-211ENST00000611279 BCAR3O75815 825 aa22.29■■□□□ 1.16
MTHFD1L-211ENST00000611279 LRPPRCP42704 1394 aaKnown RBP22.28■■□□□ 1.16
MTHFD1L-211ENST00000611279 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
MTHFD1L-211ENST00000611279 NUP155O75694 1391 aa22.27■■□□□ 1.16
MTHFD1L-211ENST00000611279 NBPF1Q3BBV0 1214 aa22.27■■□□□ 1.16
MTHFD1L-211ENST00000611279 ARID3AQ99856 593 aa22.26■■□□□ 1.15
MTHFD1L-211ENST00000611279 TEX14Q8IWB6 1497 aa22.26■■□□□ 1.15
MTHFD1L-211ENST00000611279 COG6Q9Y2V7 657 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms