RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 ABCC5O15440 1437 aa34.09■■■■□ 3.05
HOXA4-204ENST00000610970 GPATCH8Q9UKJ3 1502 aaKnown RBP34.03■■■■□ 3.04
HOXA4-204ENST00000610970 KDM6BO15054 1643 aa34.02■■■■□ 3.04
HOXA4-204ENST00000610970 CLASP1Q7Z460 1538 aa34.02■■■■□ 3.04
HOXA4-204ENST00000610970 CAMSAP2Q08AD1 1489 aa34■■■■□ 3.03
HOXA4-204ENST00000610970 KIF14Q15058 1648 aa33.98■■■■□ 3.03
HOXA4-204ENST00000610970 CFDP1Q9UEE9 299 aaPredicted RBP33.98■■■■□ 3.03
HOXA4-204ENST00000610970 TRIM52Q96A61 297 aa33.97■■■■□ 3.03
HOXA4-204ENST00000610970 ADGBQ8N7X0 1667 aa33.97■■■■□ 3.03
HOXA4-204ENST00000610970 PLEKHD1A6NEE1 506 aa33.96■■■■□ 3.03
HOXA4-204ENST00000610970 DENND4BO75064 1496 aaPredicted RBP33.96■■■■□ 3.03
HOXA4-204ENST00000610970 ATP10BO94823 1461 aa33.96■■■■□ 3.03
HOXA4-204ENST00000610970 YTHDC1Q96MU7 727 aaKnown RBP33.95■■■■□ 3.03
HOXA4-204ENST00000610970 MPHOSPH9Q99550 1183 aa33.93■■■■□ 3.02
HOXA4-204ENST00000610970 SHROOM2Q13796 1616 aa33.93■■■■□ 3.02
HOXA4-204ENST00000610970 ADGRL2O95490 1459 aa33.92■■■■□ 3.02
HOXA4-204ENST00000610970 ZNF644Q9H582 1327 aaPredicted RBP33.92■■■■□ 3.02
HOXA4-204ENST00000610970 CROCC2H7BZ55 1655 aa33.91■■■■□ 3.02
HOXA4-204ENST00000610970 PTPRGP23470 1445 aa33.91■■■■□ 3.02
HOXA4-204ENST00000610970 ABCC10Q5T3U5 1492 aa33.89■■■■□ 3.02
HOXA4-204ENST00000610970 KDM5BQ9UGL1 1544 aa33.89■■■■□ 3.02
HOXA4-204ENST00000610970 GTF3C3Q9Y5Q9 886 aa33.87■■■■□ 3.01
HOXA4-204ENST00000610970 CDC42BPAQ5VT25 1732 aa33.86■■■■□ 3.01
HOXA4-204ENST00000610970 RIMBP3CA6NJZ7 1639 aa33.85■■■■□ 3.01
HOXA4-204ENST00000610970 RIMBP3BA6NNM3 1639 aa33.85■■■■□ 3.01
HOXA4-204ENST00000610970 RIMBP3Q9UFD9 1639 aa33.85■■■■□ 3.01
HOXA4-204ENST00000610970 NCOA1Q15788 1441 aa33.84■■■■□ 3.01
HOXA4-204ENST00000610970 SHANK2Q9UPX8 1470 aa33.8■■■■□ 3
HOXA4-204ENST00000610970 ANKRD30AQ9BXX3 1397 aa33.78■■■■□ 3
HOXA4-204ENST00000610970 ANKRD30BQ9BXX2 1392 aa33.76■■■■□ 3
HOXA4-204ENST00000610970 ERCC6L2Q5T890 1561 aa33.76■■■□□ 2.99
HOXA4-204ENST00000610970 RPRD2Q5VT52 1461 aaKnown RBP33.72■■■□□ 2.99
HOXA4-204ENST00000610970 DDX10Q13206 875 aaKnown RBP33.71■■■□□ 2.99
HOXA4-204ENST00000610970 ZNF777Q9ULD5 760 aaPredicted RBP33.7■■■□□ 2.99
HOXA4-204ENST00000610970 ARHGEF5Q12774 1597 aa33.7■■■□□ 2.99
HOXA4-204ENST00000610970 SLC4A1APQ9BWU0 796 aaKnown RBP33.67■■■□□ 2.98
HOXA4-204ENST00000610970 PZPP20742 1482 aa33.66■■■□□ 2.98
HOXA4-204ENST00000610970 PREX2Q70Z35 1606 aa33.62■■■□□ 2.97
HOXA4-204ENST00000610970 C9orf84Q5VXU9 1444 aa33.62■■■□□ 2.97
HOXA4-204ENST00000610970 RSPH4AQ5TD94 716 aa33.61■■■□□ 2.97
HOXA4-204ENST00000610970 ANKRD50Q9ULJ7 1429 aa33.6■■■□□ 2.97
HOXA4-204ENST00000610970 ABCC2Q92887 1545 aa33.6■■■□□ 2.97
HOXA4-204ENST00000610970 CYB5RLQ6IPT4 315 aa33.58■■■□□ 2.97
HOXA4-204ENST00000610970 L3MBTL2Q969R5 705 aa33.58■■■□□ 2.97
HOXA4-204ENST00000610970 TSPY4P0CV99 314 aa33.57■■■□□ 2.96
HOXA4-204ENST00000610970 TSPY10P0CW01 314 aa33.57■■■□□ 2.96
HOXA4-204ENST00000610970 KIAA1107Q9UPP5 1409 aa33.57■■■□□ 2.96
HOXA4-204ENST00000610970 TEX14Q8IWB6 1497 aa33.56■■■□□ 2.96
HOXA4-204ENST00000610970 CDC42BPBQ9Y5S2 1711 aa33.55■■■□□ 2.96
HOXA4-204ENST00000610970 CCER2I3L3R5 266 aa33.55■■■□□ 2.96
HOXA4-204ENST00000610970 KDM5DQ9BY66 1539 aa33.54■■■□□ 2.96
HOXA4-204ENST00000610970 MBD5Q9P267 1494 aa33.54■■■□□ 2.96
HOXA4-204ENST00000610970 FOXD1Q16676 465 aa33.53■■■□□ 2.96
HOXA4-204ENST00000610970 HIRIP3Q9BW71 556 aaPredicted RBP33.53■■■□□ 2.96
HOXA4-204ENST00000610970 ANP32CO43423 234 aa33.51■■■□□ 2.96
HOXA4-204ENST00000610970 EIF4G2P78344 907 aaKnown RBP eCLIP33.51■■■□□ 2.96
HOXA4-204ENST00000610970 SAMD9LQ8IVG5 1584 aa33.51■■■□□ 2.95
HOXA4-204ENST00000610970 CCDC141Q6ZP82 1450 aa33.5■■■□□ 2.95
HOXA4-204ENST00000610970 UHRF1BP1LA0JNW5 1464 aa33.49■■■□□ 2.95
HOXA4-204ENST00000610970 HSPA5P11021 654 aaKnown RBP33.45■■■□□ 2.95
HOXA4-204ENST00000610970 MAST1Q9Y2H9 1570 aa33.45■■■□□ 2.94
HOXA4-204ENST00000610970 PLEKHH2Q8IVE3 1493 aa33.45■■■□□ 2.94
HOXA4-204ENST00000610970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.43■■■□□ 2.94
HOXA4-204ENST00000610970 KIF15Q9NS87 1388 aa33.42■■■□□ 2.94
HOXA4-204ENST00000610970 MYO5CQ9NQX4 1742 aa33.41■■■□□ 2.94
HOXA4-204ENST00000610970 HNRNPMP52272 730 aaKnown RBP eCLIP33.4■■■□□ 2.94
HOXA4-204ENST00000610970 TTC37Q6PGP7 1564 aa33.4■■■□□ 2.94
HOXA4-204ENST00000610970 PKD2Q13563 968 aa33.39■■■□□ 2.94
HOXA4-204ENST00000610970 NUP155O75694 1391 aa33.37■■■□□ 2.93
HOXA4-204ENST00000610970 ARHGAP5Q13017 1502 aa33.37■■■□□ 2.93
HOXA4-204ENST00000610970 ZCCHC11Q5TAX3 1644 aaKnown RBP33.33■■■□□ 2.93
HOXA4-204ENST00000610970 NBPF8Q3BBV2 869 aa33.33■■■□□ 2.93
HOXA4-204ENST00000610970 WASHC2AQ641Q2 1341 aa33.31■■■□□ 2.92
HOXA4-204ENST00000610970 PELP1Q8IZL8 1130 aaKnown RBP33.31■■■□□ 2.92
HOXA4-204ENST00000610970 SYCP2Q9BX26 1530 aa33.3■■■□□ 2.92
HOXA4-204ENST00000610970 KCNH8Q96L42 1107 aa33.3■■■□□ 2.92
HOXA4-204ENST00000610970 PLXNC1O60486 1568 aa33.29■■■□□ 2.92
HOXA4-204ENST00000610970 POLR1AO95602 1720 aaPredicted RBP33.28■■■□□ 2.92
HOXA4-204ENST00000610970 SPATA31E1Q6ZUB1 1445 aa33.27■■■□□ 2.92
HOXA4-204ENST00000610970 ARHGEF12Q9NZN5 1544 aa33.26■■■□□ 2.92
HOXA4-204ENST00000610970 PLCH2O75038 1416 aa33.25■■■□□ 2.91
HOXA4-204ENST00000610970 UHRF1BP1Q6BDS2 1440 aa33.23■■■□□ 2.91
HOXA4-204ENST00000610970 UNC13BO14795 1591 aa33.22■■■□□ 2.91
HOXA4-204ENST00000610970 CNTLNQ9NXG0 1405 aa33.22■■■□□ 2.91
HOXA4-204ENST00000610970 CCDC7Q96M83 1385 aa33.21■■■□□ 2.91
HOXA4-204ENST00000610970 ARAP3Q8WWN8 1544 aa33.19■■■□□ 2.9
HOXA4-204ENST00000610970 FAM135AQ9P2D6 1515 aa33.19■■■□□ 2.9
HOXA4-204ENST00000610970 EFCAB2Q5VUJ9 269 aa33.16■■■□□ 2.9
HOXA4-204ENST00000610970 DUOX2Q9NRD8 1548 aa33.15■■■□□ 2.9
HOXA4-204ENST00000610970 RALGAPBQ86X10 1494 aa33.11■■■□□ 2.89
HOXA4-204ENST00000610970 ABCC1P33527 1531 aa33.1■■■□□ 2.89
HOXA4-204ENST00000610970 ERBINQ96RT1 1412 aa33.09■■■□□ 2.89
HOXA4-204ENST00000610970 IQGAP3Q86VI3 1631 aa33.09■■■□□ 2.89
HOXA4-204ENST00000610970 ARID4BQ4LE39 1312 aaPredicted RBP33.08■■■□□ 2.89
HOXA4-204ENST00000610970 C11orf95C9JLR9 678 aaPredicted RBP33.05■■■□□ 2.88
HOXA4-204ENST00000610970 KDM5CP41229 1560 aa33.05■■■□□ 2.88
HOXA4-204ENST00000610970 MAGI2Q86UL8 1455 aa33.04■■■□□ 2.88
HOXA4-204ENST00000610970 KIF7Q2M1P5 1343 aa33.02■■■□□ 2.88
HOXA4-204ENST00000610970 USP47Q96K76 1375 aa33.02■■■□□ 2.88
HOXA4-204ENST00000610970 RTEL1-TNFRSF6BF6WH68 1400 aa33.01■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms