RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 KIF14Q15058 1648 aa21.82■■□□□ 1.08
CNTFR-204ENST00000610543 ABCC5O15440 1437 aa21.82■■□□□ 1.08
CNTFR-204ENST00000610543 KDM6BO15054 1643 aa21.82■■□□□ 1.08
CNTFR-204ENST00000610543 CAMSAP2Q08AD1 1489 aa21.81■■□□□ 1.08
CNTFR-204ENST00000610543 ADGBQ8N7X0 1667 aa21.8■■□□□ 1.08
CNTFR-204ENST00000610543 CHD1O14646 1710 aa21.79■■□□□ 1.08
CNTFR-204ENST00000610543 GPATCH8Q9UKJ3 1502 aaKnown RBP21.78■■□□□ 1.08
CNTFR-204ENST00000610543 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
CNTFR-204ENST00000610543 CROCC2H7BZ55 1655 aa21.77■■□□□ 1.08
CNTFR-204ENST00000610543 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
CNTFR-204ENST00000610543 ZNF644Q9H582 1327 aaPredicted RBP21.73■■□□□ 1.07
CNTFR-204ENST00000610543 DENND4BO75064 1496 aaPredicted RBP21.73■■□□□ 1.07
CNTFR-204ENST00000610543 ATP10BO94823 1461 aa21.73■■□□□ 1.07
CNTFR-204ENST00000610543 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
CNTFR-204ENST00000610543 CDC42BPAQ5VT25 1732 aa21.72■■□□□ 1.07
CNTFR-204ENST00000610543 PTPRGP23470 1445 aa21.71■■□□□ 1.07
CNTFR-204ENST00000610543 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
CNTFR-204ENST00000610543 MPHOSPH9Q99550 1183 aa21.7■■□□□ 1.07
CNTFR-204ENST00000610543 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.07
CNTFR-204ENST00000610543 ADGRL2O95490 1459 aa21.7■■□□□ 1.07
CNTFR-204ENST00000610543 ABCC10Q5T3U5 1492 aa21.69■■□□□ 1.06
CNTFR-204ENST00000610543 KDM5BQ9UGL1 1544 aa21.69■■□□□ 1.06
CNTFR-204ENST00000610543 NCOA1Q15788 1441 aa21.65■■□□□ 1.06
CNTFR-204ENST00000610543 SHANK2Q9UPX8 1470 aa21.65■■□□□ 1.06
CNTFR-204ENST00000610543 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
CNTFR-204ENST00000610543 ANKRD30AQ9BXX3 1397 aa21.63■■□□□ 1.05
CNTFR-204ENST00000610543 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
CNTFR-204ENST00000610543 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
CNTFR-204ENST00000610543 ANKRD30BQ9BXX2 1392 aa21.59■■□□□ 1.05
CNTFR-204ENST00000610543 PREX2Q70Z35 1606 aa21.58■■□□□ 1.04
CNTFR-204ENST00000610543 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.04
CNTFR-204ENST00000610543 SLC4A1APQ9BWU0 796 aaKnown RBP21.57■■□□□ 1.04
CNTFR-204ENST00000610543 C9orf84Q5VXU9 1444 aa21.56■■□□□ 1.04
CNTFR-204ENST00000610543 PZPP20742 1482 aa21.56■■□□□ 1.04
CNTFR-204ENST00000610543 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
CNTFR-204ENST00000610543 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
CNTFR-204ENST00000610543 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
CNTFR-204ENST00000610543 ABCC2Q92887 1545 aa21.54■■□□□ 1.04
CNTFR-204ENST00000610543 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
CNTFR-204ENST00000610543 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
CNTFR-204ENST00000610543 FOXD1Q16676 465 aa21.51■■□□□ 1.03
CNTFR-204ENST00000610543 CDC42BPBQ9Y5S2 1711 aa21.51■■□□□ 1.03
CNTFR-204ENST00000610543 TEX14Q8IWB6 1497 aa21.51■■□□□ 1.03
CNTFR-204ENST00000610543 TSPY4P0CV99 314 aa21.5■■□□□ 1.03
CNTFR-204ENST00000610543 TSPY10P0CW01 314 aa21.5■■□□□ 1.03
CNTFR-204ENST00000610543 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
CNTFR-204ENST00000610543 KIAA1107Q9UPP5 1409 aa21.49■■□□□ 1.03
CNTFR-204ENST00000610543 SAMD9LQ8IVG5 1584 aa21.49■■□□□ 1.03
CNTFR-204ENST00000610543 CCDC141Q6ZP82 1450 aa21.49■■□□□ 1.03
CNTFR-204ENST00000610543 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
CNTFR-204ENST00000610543 ANP32CO43423 234 aa21.47■■□□□ 1.03
CNTFR-204ENST00000610543 ERCC6L2Q5T890 1561 aa21.47■■□□□ 1.03
CNTFR-204ENST00000610543 KDM5DQ9BY66 1539 aa21.46■■□□□ 1.03
CNTFR-204ENST00000610543 EIF4G2P78344 907 aaKnown RBP eCLIP21.45■■□□□ 1.02
CNTFR-204ENST00000610543 RSPH4AQ5TD94 716 aa21.45■■□□□ 1.02
CNTFR-204ENST00000610543 MBD5Q9P267 1494 aa21.45■■□□□ 1.02
CNTFR-204ENST00000610543 MYO5CQ9NQX4 1742 aa21.45■■□□□ 1.02
CNTFR-204ENST00000610543 TTC37Q6PGP7 1564 aa21.45■■□□□ 1.02
CNTFR-204ENST00000610543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.44■■□□□ 1.02
CNTFR-204ENST00000610543 ARHGAP5Q13017 1502 aa21.43■■□□□ 1.02
CNTFR-204ENST00000610543 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
CNTFR-204ENST00000610543 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
CNTFR-204ENST00000610543 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
CNTFR-204ENST00000610543 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
CNTFR-204ENST00000610543 PLEKHH2Q8IVE3 1493 aa21.41■■□□□ 1.02
CNTFR-204ENST00000610543 MAST1Q9Y2H9 1570 aa21.4■■□□□ 1.02
CNTFR-204ENST00000610543 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.02
CNTFR-204ENST00000610543 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.02
CNTFR-204ENST00000610543 ZCCHC11Q5TAX3 1644 aaKnown RBP21.39■■□□□ 1.01
CNTFR-204ENST00000610543 NUP155O75694 1391 aa21.39■■□□□ 1.01
CNTFR-204ENST00000610543 PKD2Q13563 968 aa21.38■■□□□ 1.01
CNTFR-204ENST00000610543 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
CNTFR-204ENST00000610543 POLR1AO95602 1720 aaPredicted RBP21.33■■□□□ 1.01
CNTFR-204ENST00000610543 PLXNC1O60486 1568 aa21.33■■□□□ 1.01
CNTFR-204ENST00000610543 KCNH8Q96L42 1107 aa21.33■■□□□ 1.01
CNTFR-204ENST00000610543 WASHC2AQ641Q2 1341 aa21.33■■□□□ 1
CNTFR-204ENST00000610543 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
CNTFR-204ENST00000610543 ARHGEF12Q9NZN5 1544 aa21.3■■□□□ 1
CNTFR-204ENST00000610543 UNC13BO14795 1591 aa21.29■■□□□ 1
CNTFR-204ENST00000610543 CNTLNQ9NXG0 1405 aa21.29■■□□□ 1
CNTFR-204ENST00000610543 FAM135AQ9P2D6 1515 aa21.29■■□□□ 1
CNTFR-204ENST00000610543 PELP1Q8IZL8 1130 aaKnown RBP21.28■■□□□ 1
CNTFR-204ENST00000610543 PLCH2O75038 1416 aa21.28■■□□□ 1
CNTFR-204ENST00000610543 SPATA31E1Q6ZUB1 1445 aa21.27■■□□□ 1
CNTFR-204ENST00000610543 CCDC7Q96M83 1385 aa21.26■□□□□ 0.99
CNTFR-204ENST00000610543 DUOX2Q9NRD8 1548 aa21.24■□□□□ 0.99
CNTFR-204ENST00000610543 UHRF1BP1Q6BDS2 1440 aa21.23■□□□□ 0.99
CNTFR-204ENST00000610543 ABCC1P33527 1531 aa21.23■□□□□ 0.99
CNTFR-204ENST00000610543 ARAP3Q8WWN8 1544 aa21.23■□□□□ 0.99
CNTFR-204ENST00000610543 EFCAB2Q5VUJ9 269 aa21.21■□□□□ 0.99
CNTFR-204ENST00000610543 RALGAPBQ86X10 1494 aa21.21■□□□□ 0.99
CNTFR-204ENST00000610543 IQGAP3Q86VI3 1631 aa21.21■□□□□ 0.99
CNTFR-204ENST00000610543 ERBINQ96RT1 1412 aa21.2■□□□□ 0.98
CNTFR-204ENST00000610543 KDM5CP41229 1560 aa21.18■□□□□ 0.98
CNTFR-204ENST00000610543 USP47Q96K76 1375 aa21.18■□□□□ 0.98
CNTFR-204ENST00000610543 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
CNTFR-204ENST00000610543 MAGI2Q86UL8 1455 aa21.16■□□□□ 0.98
CNTFR-204ENST00000610543 CCDC144AA2RUR9 1427 aa21.16■□□□□ 0.98
CNTFR-204ENST00000610543 WDR7Q9Y4E6 1490 aa21.16■□□□□ 0.98
CNTFR-204ENST00000610543 KIF7Q2M1P5 1343 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms