RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PDE4AP27815 886 aa16.66■□□□□ 0.26
CDCA3-212ENST00000604599 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
CDCA3-212ENST00000604599 KDM6BO15054 1643 aa16.66■□□□□ 0.26
CDCA3-212ENST00000604599 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
CDCA3-212ENST00000604599 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
CDCA3-212ENST00000604599 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
CDCA3-212ENST00000604599 PPM1GO15355 546 aaPredicted RBP16.63■□□□□ 0.25
CDCA3-212ENST00000604599 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
CDCA3-212ENST00000604599 POLR1AO95602 1720 aaPredicted RBP16.62■□□□□ 0.25
CDCA3-212ENST00000604599 LRRIQ1Q96JM4 1722 aa16.62■□□□□ 0.25
CDCA3-212ENST00000604599 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
CDCA3-212ENST00000604599 UBE2Q2Q8WVN8 375 aa16.62■□□□□ 0.25
CDCA3-212ENST00000604599 BACH2Q9BYV9 841 aa16.62■□□□□ 0.25
CDCA3-212ENST00000604599 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
CDCA3-212ENST00000604599 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
CDCA3-212ENST00000604599 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
CDCA3-212ENST00000604599 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
CDCA3-212ENST00000604599 RRP1P56182 461 aaKnown RBP16.6■□□□□ 0.25
CDCA3-212ENST00000604599 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
CDCA3-212ENST00000604599 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
CDCA3-212ENST00000604599 PNISRQ8TF01 805 aaKnown RBP16.58■□□□□ 0.24
CDCA3-212ENST00000604599 GSE1Q14687 1217 aa16.57■□□□□ 0.24
CDCA3-212ENST00000604599 TEX14Q8IWB6 1497 aa16.57■□□□□ 0.24
CDCA3-212ENST00000604599 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
CDCA3-212ENST00000604599 SKAP1Q86WV1 359 aa16.56■□□□□ 0.24
CDCA3-212ENST00000604599 RPRD2Q5VT52 1461 aaKnown RBP16.56■□□□□ 0.24
CDCA3-212ENST00000604599 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
CDCA3-212ENST00000604599 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
CDCA3-212ENST00000604599 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
CDCA3-212ENST00000604599 ANKRD30BQ9BXX2 1392 aa16.53■□□□□ 0.24
CDCA3-212ENST00000604599 MS4A1P11836 297 aa16.53■□□□□ 0.24
CDCA3-212ENST00000604599 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
CDCA3-212ENST00000604599 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
CDCA3-212ENST00000604599 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
CDCA3-212ENST00000604599 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
CDCA3-212ENST00000604599 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.23
CDCA3-212ENST00000604599 BCORL1Q5H9F3 1711 aa16.51■□□□□ 0.23
CDCA3-212ENST00000604599 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
CDCA3-212ENST00000604599 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
CDCA3-212ENST00000604599 DDRGK1Q96HY6 314 aa16.49■□□□□ 0.23
CDCA3-212ENST00000604599 USP47Q96K76 1375 aa16.49■□□□□ 0.23
CDCA3-212ENST00000604599 MIA2Q96PC5 1412 aa16.49■□□□□ 0.23
CDCA3-212ENST00000604599 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
CDCA3-212ENST00000604599 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
CDCA3-212ENST00000604599 ARHGEF11O15085 1522 aa16.47■□□□□ 0.23
CDCA3-212ENST00000604599 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
CDCA3-212ENST00000604599 PLIN1O60240 522 aa16.46■□□□□ 0.23
CDCA3-212ENST00000604599 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
CDCA3-212ENST00000604599 CUL7Q14999 1698 aa16.44■□□□□ 0.22
CDCA3-212ENST00000604599 DAXXQ9UER7 740 aaPredicted RBP16.44■□□□□ 0.22
CDCA3-212ENST00000604599 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
CDCA3-212ENST00000604599 SAMD9Q5K651 1589 aa16.44■□□□□ 0.22
CDCA3-212ENST00000604599 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
CDCA3-212ENST00000604599 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
CDCA3-212ENST00000604599 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
CDCA3-212ENST00000604599 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
CDCA3-212ENST00000604599 KIF15Q9NS87 1388 aa16.4■□□□□ 0.22
CDCA3-212ENST00000604599 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
CDCA3-212ENST00000604599 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
CDCA3-212ENST00000604599 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-212ENST00000604599 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-212ENST00000604599 FRAT2O75474 233 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-212ENST00000604599 KDM5CP41229 1560 aa16.37■□□□□ 0.21
CDCA3-212ENST00000604599 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
CDCA3-212ENST00000604599 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
CDCA3-212ENST00000604599 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
CDCA3-212ENST00000604599 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-212ENST00000604599 MBD5Q9P267 1494 aa16.35■□□□□ 0.21
CDCA3-212ENST00000604599 DAPK1P53355 1430 aa16.35■□□□□ 0.21
CDCA3-212ENST00000604599 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
CDCA3-212ENST00000604599 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
CDCA3-212ENST00000604599 KIF14Q15058 1648 aa16.33■□□□□ 0.21
CDCA3-212ENST00000604599 CDK13Q14004 1512 aaKnown RBP16.33■□□□□ 0.21
CDCA3-212ENST00000604599 RALBP1Q15311 655 aa16.33■□□□□ 0.21
CDCA3-212ENST00000604599 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
CDCA3-212ENST00000604599 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
CDCA3-212ENST00000604599 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.2
CDCA3-212ENST00000604599 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
CDCA3-212ENST00000604599 ZNF644Q9H582 1327 aaPredicted RBP16.32■□□□□ 0.2
CDCA3-212ENST00000604599 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
CDCA3-212ENST00000604599 ROCK1Q13464 1354 aa16.31■□□□□ 0.2
CDCA3-212ENST00000604599 PZPP20742 1482 aa16.3■□□□□ 0.2
CDCA3-212ENST00000604599 ST20-MTHFSA0A0A6YYL1 179 aa16.3■□□□□ 0.2
CDCA3-212ENST00000604599 EPRSP07814 1512 aaKnown RBP16.3■□□□□ 0.2
CDCA3-212ENST00000604599 ABCC5O15440 1437 aa16.3■□□□□ 0.2
CDCA3-212ENST00000604599 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
CDCA3-212ENST00000604599 NESP48681 1621 aa16.29■□□□□ 0.2
CDCA3-212ENST00000604599 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
CDCA3-212ENST00000604599 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
CDCA3-212ENST00000604599 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
CDCA3-212ENST00000604599 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
CDCA3-212ENST00000604599 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.2
CDCA3-212ENST00000604599 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.19
CDCA3-212ENST00000604599 PKD2Q13563 968 aa16.26■□□□□ 0.19
CDCA3-212ENST00000604599 DNMT1P26358 1616 aaKnown RBP16.26■□□□□ 0.19
CDCA3-212ENST00000604599 RGS3P49796 1198 aa16.26■□□□□ 0.19
CDCA3-212ENST00000604599 KDM2AQ9Y2K7 1162 aa16.26■□□□□ 0.19
CDCA3-212ENST00000604599 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
CDCA3-212ENST00000604599 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
CDCA3-212ENST00000604599 CENPQQ7L2Z9 268 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms