RNA–Protein interactions for RNA: ENST00000600396.1

VAV1-208, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene VAV1, Length 689 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-208ENST00000600396 CEBPAP49715 358 aaPredicted RBP24.76■■□□□ 1.55
VAV1-208ENST00000600396 TTC37Q6PGP7 1564 aa24.75■■□□□ 1.55
VAV1-208ENST00000600396 SCAPERQ9BY12 1400 aa24.74■■□□□ 1.55
VAV1-208ENST00000600396 HECW1Q76N89 1606 aa24.74■■□□□ 1.55
VAV1-208ENST00000600396 SIGLEC1Q9BZZ2 1709 aa24.74■■□□□ 1.55
VAV1-208ENST00000600396 ATP10AO60312 1499 aa24.7■■□□□ 1.55
VAV1-208ENST00000600396 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
VAV1-208ENST00000600396 MYT1LQ9UL68 1186 aa24.68■■□□□ 1.54
VAV1-208ENST00000600396 C9orf84Q5VXU9 1444 aa24.68■■□□□ 1.54
VAV1-208ENST00000600396 ARHGEF12Q9NZN5 1544 aa24.67■■□□□ 1.54
VAV1-208ENST00000600396 EFCAB2Q5VUJ9 269 aa24.67■■□□□ 1.54
VAV1-208ENST00000600396 UHRF1BP1Q6BDS2 1440 aa24.67■■□□□ 1.54
VAV1-208ENST00000600396 PLCH2O75038 1416 aa24.66■■□□□ 1.54
VAV1-208ENST00000600396 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
VAV1-208ENST00000600396 ESF1Q9H501 851 aaKnown RBP24.61■■□□□ 1.53
VAV1-208ENST00000600396 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
VAV1-208ENST00000600396 STRCQ7RTU9 1775 aa24.61■■□□□ 1.53
VAV1-208ENST00000600396 SETD1BQ9UPS6 1966 aaKnown RBP24.6■■□□□ 1.53
VAV1-208ENST00000600396 PTPRTO14522 1441 aa24.57■■□□□ 1.52
VAV1-208ENST00000600396 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
VAV1-208ENST00000600396 CDK11AQ9UQ88 783 aaPredicted RBP24.56■■□□□ 1.52
VAV1-208ENST00000600396 AFAP1Q8N556 730 aa24.55■■□□□ 1.52
VAV1-208ENST00000600396 ZNF518AQ6AHZ1 1483 aa24.52■■□□□ 1.52
VAV1-208ENST00000600396 EEA1Q15075 1411 aa24.5■■□□□ 1.51
VAV1-208ENST00000600396 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
VAV1-208ENST00000600396 TRAPPC8Q9Y2L5 1435 aa24.45■■□□□ 1.51
VAV1-208ENST00000600396 ARHGAP5Q13017 1502 aa24.45■■□□□ 1.5
VAV1-208ENST00000600396 IQSEC2Q5JU85 1478 aa24.45■■□□□ 1.5
VAV1-208ENST00000600396 LTBP4Q8N2S1 1624 aa24.43■■□□□ 1.5
VAV1-208ENST00000600396 C3P01024 1663 aa24.4■■□□□ 1.5
VAV1-208ENST00000600396 UBAP1LF5GYI3 381 aa24.4■■□□□ 1.5
VAV1-208ENST00000600396 FMN1Q68DA7 1419 aa24.4■■□□□ 1.5
VAV1-208ENST00000600396 KDM5CP41229 1560 aa24.4■■□□□ 1.5
VAV1-208ENST00000600396 DIP2CQ9Y2E4 1556 aa24.38■■□□□ 1.49
VAV1-208ENST00000600396 CLIP1P30622 1438 aa24.38■■□□□ 1.49
VAV1-208ENST00000600396 NCOA1Q15788 1441 aa24.38■■□□□ 1.49
VAV1-208ENST00000600396 KIF14Q15058 1648 aa24.37■■□□□ 1.49
VAV1-208ENST00000600396 REREQ9P2R6 1566 aa24.37■■□□□ 1.49
VAV1-208ENST00000600396 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
VAV1-208ENST00000600396 MLH3Q9UHC1 1453 aa24.36■■□□□ 1.49
VAV1-208ENST00000600396 TROQ12816 1431 aaPredicted RBP24.35■■□□□ 1.49
VAV1-208ENST00000600396 CNTLNQ9NXG0 1405 aa24.35■■□□□ 1.49
VAV1-208ENST00000600396 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
VAV1-208ENST00000600396 AGLP35573 1532 aa24.33■■□□□ 1.49
VAV1-208ENST00000600396 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
VAV1-208ENST00000600396 ABCA6Q8N139 1617 aa24.31■■□□□ 1.48
VAV1-208ENST00000600396 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
VAV1-208ENST00000600396 CAMSAP1Q5T5Y3 1602 aa24.3■■□□□ 1.48
VAV1-208ENST00000600396 NPATQ14207 1427 aa24.27■■□□□ 1.48
VAV1-208ENST00000600396 PKD2Q13563 968 aa24.26■■□□□ 1.47
VAV1-208ENST00000600396 ZMYM3Q14202 1370 aa24.26■■□□□ 1.47
VAV1-208ENST00000600396 CDC42BPBQ9Y5S2 1711 aa24.22■■□□□ 1.47
VAV1-208ENST00000600396 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
VAV1-208ENST00000600396 ABCC1P33527 1531 aa24.2■■□□□ 1.47
VAV1-208ENST00000600396 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.47
VAV1-208ENST00000600396 ZNF777Q9ULD5 760 aaPredicted RBP24.2■■□□□ 1.46
VAV1-208ENST00000600396 KIDINS220Q9ULH0 1771 aa24.17■■□□□ 1.46
VAV1-208ENST00000600396 PPP6R1Q9UPN7 881 aa24.17■■□□□ 1.46
VAV1-208ENST00000600396 SPAG9O60271 1321 aaKnown RBP24.16■■□□□ 1.46
VAV1-208ENST00000600396 ITSN2Q9NZM3 1697 aa24.16■■□□□ 1.46
VAV1-208ENST00000600396 MROH2AA6NES4 1674 aa24.15■■□□□ 1.46
VAV1-208ENST00000600396 PREX2Q70Z35 1606 aa24.15■■□□□ 1.46
VAV1-208ENST00000600396 PIP4K2BP78356 416 aa24.15■■□□□ 1.46
VAV1-208ENST00000600396 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
VAV1-208ENST00000600396 TOM1O60784 492 aa24.13■■□□□ 1.45
VAV1-208ENST00000600396 HSPA1LP34931 641 aa24.13■■□□□ 1.45
VAV1-208ENST00000600396 GGT6Q6P531 493 aa24.12■■□□□ 1.45
VAV1-208ENST00000600396 HNRNPMP52272 730 aaKnown RBP eCLIP24.1■■□□□ 1.45
VAV1-208ENST00000600396 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.45
VAV1-208ENST00000600396 TCOF1Q13428 1488 aaKnown RBP24.08■■□□□ 1.45
VAV1-208ENST00000600396 SUPT6HQ7KZ85 1726 aaKnown RBP24.08■■□□□ 1.45
VAV1-208ENST00000600396 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.45
VAV1-208ENST00000600396 CCDC18Q5T9S5 1454 aa24.07■■□□□ 1.44
VAV1-208ENST00000600396 LRRIQ1Q96JM4 1722 aa24.07■■□□□ 1.44
VAV1-208ENST00000600396 CLTCQ00610 1675 aaKnown RBP24.06■■□□□ 1.44
VAV1-208ENST00000600396 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
VAV1-208ENST00000600396 CEP170BQ9Y4F5 1589 aaPredicted RBP24.06■■□□□ 1.44
VAV1-208ENST00000600396 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
VAV1-208ENST00000600396 ZNF142P52746 1687 aaPredicted RBP24.04■■□□□ 1.44
VAV1-208ENST00000600396 MED1Q15648 1581 aaPredicted RBP24.03■■□□□ 1.44
VAV1-208ENST00000600396 A2MP01023 1474 aa24.02■■□□□ 1.44
VAV1-208ENST00000600396 CDC42BPAQ5VT25 1732 aa24.02■■□□□ 1.44
VAV1-208ENST00000600396 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
VAV1-208ENST00000600396 SYCP2Q9BX26 1530 aa24.01■■□□□ 1.43
VAV1-208ENST00000600396 CFDP1Q9UEE9 299 aaPredicted RBP24■■□□□ 1.43
VAV1-208ENST00000600396 ATP7AQ04656 1500 aa23.99■■□□□ 1.43
VAV1-208ENST00000600396 A2ML1A8K2U0 1454 aa23.97■■□□□ 1.43
VAV1-208ENST00000600396 CPS1P31327 1500 aa23.96■■□□□ 1.43
VAV1-208ENST00000600396 KIAA1107Q9UPP5 1409 aa23.96■■□□□ 1.43
VAV1-208ENST00000600396 GPATCH8Q9UKJ3 1502 aaKnown RBP23.95■■□□□ 1.43
VAV1-208ENST00000600396 PLEKHH2Q8IVE3 1493 aa23.95■■□□□ 1.42
VAV1-208ENST00000600396 SHANK2Q9UPX8 1470 aa23.94■■□□□ 1.42
VAV1-208ENST00000600396 ANKLE2Q86XL3 938 aa23.93■■□□□ 1.42
VAV1-208ENST00000600396 PLXNC1O60486 1568 aa23.93■■□□□ 1.42
VAV1-208ENST00000600396 DNMT1P26358 1616 aaKnown RBP23.92■■□□□ 1.42
VAV1-208ENST00000600396 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
VAV1-208ENST00000600396 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
VAV1-208ENST00000600396 TNRQ92752 1358 aa23.89■■□□□ 1.41
VAV1-208ENST00000600396 INO80Q9ULG1 1556 aaPredicted RBP23.88■■□□□ 1.41
VAV1-208ENST00000600396 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms