RNA–Protein interactions for RNA: ENST00000595900.1

SIN3B-207, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 4

Gene SIN3B, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-207ENST00000595900 NUP153P49790 1475 aaKnown RBP18.04■□□□□ 0.48
SIN3B-207ENST00000595900 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
SIN3B-207ENST00000595900 CFAP74Q9C0B2 1584 aa18.04■□□□□ 0.48
SIN3B-207ENST00000595900 PTPRTO14522 1441 aa18.03■□□□□ 0.48
SIN3B-207ENST00000595900 UHRF1BP1Q6BDS2 1440 aa18.03■□□□□ 0.48
SIN3B-207ENST00000595900 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
SIN3B-207ENST00000595900 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
SIN3B-207ENST00000595900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.47
SIN3B-207ENST00000595900 ATP10AO60312 1499 aa17.99■□□□□ 0.47
SIN3B-207ENST00000595900 SAMD9Q5K651 1589 aa17.99■□□□□ 0.47
SIN3B-207ENST00000595900 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
SIN3B-207ENST00000595900 SCAPERQ9BY12 1400 aa17.98■□□□□ 0.47
SIN3B-207ENST00000595900 LTBP4Q8N2S1 1624 aa17.97■□□□□ 0.47
SIN3B-207ENST00000595900 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
SIN3B-207ENST00000595900 PLCH2O75038 1416 aa17.91■□□□□ 0.46
SIN3B-207ENST00000595900 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
SIN3B-207ENST00000595900 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
SIN3B-207ENST00000595900 EFCAB2Q5VUJ9 269 aa17.85■□□□□ 0.45
SIN3B-207ENST00000595900 TRAPPC8Q9Y2L5 1435 aa17.85■□□□□ 0.45
SIN3B-207ENST00000595900 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
SIN3B-207ENST00000595900 ZNF518AQ6AHZ1 1483 aa17.82■□□□□ 0.44
SIN3B-207ENST00000595900 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
SIN3B-207ENST00000595900 AFAP1Q8N556 730 aa17.81■□□□□ 0.44
SIN3B-207ENST00000595900 ZNF335Q9H4Z2 1342 aaPredicted RBP17.8■□□□□ 0.44
SIN3B-207ENST00000595900 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
SIN3B-207ENST00000595900 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
SIN3B-207ENST00000595900 C3P01024 1663 aa17.78■□□□□ 0.44
SIN3B-207ENST00000595900 KDM5CP41229 1560 aa17.78■□□□□ 0.44
SIN3B-207ENST00000595900 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.44
SIN3B-207ENST00000595900 REREQ9P2R6 1566 aa17.77■□□□□ 0.44
SIN3B-207ENST00000595900 DIP2CQ9Y2E4 1556 aa17.75■□□□□ 0.43
SIN3B-207ENST00000595900 CNTLNQ9NXG0 1405 aa17.75■□□□□ 0.43
SIN3B-207ENST00000595900 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
SIN3B-207ENST00000595900 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
SIN3B-207ENST00000595900 AGLP35573 1532 aa17.74■□□□□ 0.43
SIN3B-207ENST00000595900 MED1Q15648 1581 aaPredicted RBP17.73■□□□□ 0.43
SIN3B-207ENST00000595900 MLH3Q9UHC1 1453 aa17.72■□□□□ 0.43
SIN3B-207ENST00000595900 HSPA1LP34931 641 aa17.72■□□□□ 0.43
SIN3B-207ENST00000595900 NPATQ14207 1427 aa17.72■□□□□ 0.43
SIN3B-207ENST00000595900 PKD2Q13563 968 aa17.71■□□□□ 0.43
SIN3B-207ENST00000595900 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
SIN3B-207ENST00000595900 ARHGAP5Q13017 1502 aa17.69■□□□□ 0.42
SIN3B-207ENST00000595900 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
SIN3B-207ENST00000595900 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
SIN3B-207ENST00000595900 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
SIN3B-207ENST00000595900 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
SIN3B-207ENST00000595900 PIP4K2BP78356 416 aa17.66■□□□□ 0.42
SIN3B-207ENST00000595900 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
SIN3B-207ENST00000595900 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
SIN3B-207ENST00000595900 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
SIN3B-207ENST00000595900 TCOF1Q13428 1488 aaKnown RBP17.64■□□□□ 0.41
SIN3B-207ENST00000595900 TOM1O60784 492 aa17.64■□□□□ 0.41
SIN3B-207ENST00000595900 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
SIN3B-207ENST00000595900 KIF14Q15058 1648 aa17.63■□□□□ 0.41
SIN3B-207ENST00000595900 TROQ12816 1431 aaPredicted RBP17.63■□□□□ 0.41
SIN3B-207ENST00000595900 CLIP1P30622 1438 aa17.6■□□□□ 0.41
SIN3B-207ENST00000595900 MROH2AA6NES4 1674 aa17.58■□□□□ 0.41
SIN3B-207ENST00000595900 FMN1Q68DA7 1419 aa17.58■□□□□ 0.41
SIN3B-207ENST00000595900 ABCC1P33527 1531 aa17.57■□□□□ 0.4
SIN3B-207ENST00000595900 EEA1Q15075 1411 aa17.56■□□□□ 0.4
SIN3B-207ENST00000595900 ZNF142P52746 1687 aaPredicted RBP17.56■□□□□ 0.4
SIN3B-207ENST00000595900 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
SIN3B-207ENST00000595900 CPS1P31327 1500 aa17.55■□□□□ 0.4
SIN3B-207ENST00000595900 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
SIN3B-207ENST00000595900 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
SIN3B-207ENST00000595900 KIDINS220Q9ULH0 1771 aa17.54■□□□□ 0.4
SIN3B-207ENST00000595900 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.39
SIN3B-207ENST00000595900 SHANK2Q9UPX8 1470 aa17.5■□□□□ 0.39
SIN3B-207ENST00000595900 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
SIN3B-207ENST00000595900 SPAG9O60271 1321 aaKnown RBP17.48■□□□□ 0.39
SIN3B-207ENST00000595900 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
SIN3B-207ENST00000595900 A2ML1A8K2U0 1454 aa17.48■□□□□ 0.39
SIN3B-207ENST00000595900 SAMD9LQ8IVG5 1584 aa17.47■□□□□ 0.39
SIN3B-207ENST00000595900 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
SIN3B-207ENST00000595900 CLTCQ00610 1675 aaKnown RBP17.46■□□□□ 0.39
SIN3B-207ENST00000595900 GGT6Q6P531 493 aa17.46■□□□□ 0.39
SIN3B-207ENST00000595900 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
SIN3B-207ENST00000595900 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
SIN3B-207ENST00000595900 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
SIN3B-207ENST00000595900 RGS17Q9UGC6 210 aaPredicted RBP17.44■□□□□ 0.38
SIN3B-207ENST00000595900 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
SIN3B-207ENST00000595900 A2MP01023 1474 aa17.43■□□□□ 0.38
SIN3B-207ENST00000595900 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
SIN3B-207ENST00000595900 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
SIN3B-207ENST00000595900 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
SIN3B-207ENST00000595900 HNRNPMP52272 730 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■■■ 32.6
SIN3B-207ENST00000595900 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
SIN3B-207ENST00000595900 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
SIN3B-207ENST00000595900 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
SIN3B-207ENST00000595900 UBTFP17480 764 aaKnown RBP17.39■□□□□ 0.37
SIN3B-207ENST00000595900 VWDEQ8N2E2 1590 aa17.39■□□□□ 0.37
SIN3B-207ENST00000595900 TNRQ92752 1358 aa17.37■□□□□ 0.37
SIN3B-207ENST00000595900 POLR1AO95602 1720 aaPredicted RBP17.36■□□□□ 0.37
SIN3B-207ENST00000595900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
SIN3B-207ENST00000595900 KIAA1107Q9UPP5 1409 aa17.36■□□□□ 0.37
SIN3B-207ENST00000595900 LRRIQ1Q96JM4 1722 aa17.35■□□□□ 0.37
SIN3B-207ENST00000595900 NPHP4O75161 1426 aaPredicted RBP17.35■□□□□ 0.37
SIN3B-207ENST00000595900 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
SIN3B-207ENST00000595900 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
SIN3B-207ENST00000595900 FBXO31Q5XUX0 539 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms