RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
NOTCH3-203ENST00000595514 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
NOTCH3-203ENST00000595514 PLEKHD1A6NEE1 506 aa17.61■□□□□ 0.41
NOTCH3-203ENST00000595514 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
NOTCH3-203ENST00000595514 HECW1Q76N89 1606 aa17.58■□□□□ 0.41
NOTCH3-203ENST00000595514 LTBP4Q8N2S1 1624 aa17.58■□□□□ 0.41
NOTCH3-203ENST00000595514 ATP10AO60312 1499 aa17.57■□□□□ 0.4
NOTCH3-203ENST00000595514 C9orf84Q5VXU9 1444 aa17.57■□□□□ 0.4
NOTCH3-203ENST00000595514 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
NOTCH3-203ENST00000595514 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
NOTCH3-203ENST00000595514 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
NOTCH3-203ENST00000595514 UBAP1LF5GYI3 381 aa17.54■□□□□ 0.4
NOTCH3-203ENST00000595514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.4
NOTCH3-203ENST00000595514 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
NOTCH3-203ENST00000595514 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
NOTCH3-203ENST00000595514 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
NOTCH3-203ENST00000595514 ESF1Q9H501 851 aaKnown RBP17.46■□□□□ 0.39
NOTCH3-203ENST00000595514 PLCH2O75038 1416 aa17.45■□□□□ 0.38
NOTCH3-203ENST00000595514 TRAPPC8Q9Y2L5 1435 aa17.45■□□□□ 0.38
NOTCH3-203ENST00000595514 MYT1LQ9UL68 1186 aa17.44■□□□□ 0.38
NOTCH3-203ENST00000595514 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
NOTCH3-203ENST00000595514 EFCAB2Q5VUJ9 269 aa17.42■□□□□ 0.38
NOTCH3-203ENST00000595514 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
NOTCH3-203ENST00000595514 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
NOTCH3-203ENST00000595514 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
NOTCH3-203ENST00000595514 C3P01024 1663 aa17.39■□□□□ 0.37
NOTCH3-203ENST00000595514 HSPA1LP34931 641 aa17.38■□□□□ 0.37
NOTCH3-203ENST00000595514 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
NOTCH3-203ENST00000595514 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
NOTCH3-203ENST00000595514 CAMSAP1Q5T5Y3 1602 aa17.37■□□□□ 0.37
NOTCH3-203ENST00000595514 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
NOTCH3-203ENST00000595514 NCKAP5LQ9HCH0 1330 aa17.37■□□□□ 0.37
NOTCH3-203ENST00000595514 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
NOTCH3-203ENST00000595514 REREQ9P2R6 1566 aa17.33■□□□□ 0.37
NOTCH3-203ENST00000595514 PIP4K2BP78356 416 aa17.33■□□□□ 0.36
NOTCH3-203ENST00000595514 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
NOTCH3-203ENST00000595514 PKD2Q13563 968 aa17.32■□□□□ 0.36
NOTCH3-203ENST00000595514 KDM5CP41229 1560 aa17.32■□□□□ 0.36
NOTCH3-203ENST00000595514 AGLP35573 1532 aa17.31■□□□□ 0.36
NOTCH3-203ENST00000595514 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
NOTCH3-203ENST00000595514 NPATQ14207 1427 aa17.3■□□□□ 0.36
NOTCH3-203ENST00000595514 TOM1O60784 492 aa17.29■□□□□ 0.36
NOTCH3-203ENST00000595514 MYO5CQ9NQX4 1742 aa17.27■□□□□ 0.36
NOTCH3-203ENST00000595514 ARHGAP5Q13017 1502 aa17.27■□□□□ 0.36
NOTCH3-203ENST00000595514 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
NOTCH3-203ENST00000595514 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
NOTCH3-203ENST00000595514 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
NOTCH3-203ENST00000595514 PLA2R1Q13018 1463 aa17.26■□□□□ 0.35
NOTCH3-203ENST00000595514 ABCA6Q8N139 1617 aa17.26■□□□□ 0.35
NOTCH3-203ENST00000595514 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
NOTCH3-203ENST00000595514 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
NOTCH3-203ENST00000595514 ZMYM3Q14202 1370 aa17.24■□□□□ 0.35
NOTCH3-203ENST00000595514 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
NOTCH3-203ENST00000595514 KIF14Q15058 1648 aa17.19■□□□□ 0.34
NOTCH3-203ENST00000595514 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
NOTCH3-203ENST00000595514 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
NOTCH3-203ENST00000595514 CPS1P31327 1500 aa17.16■□□□□ 0.34
NOTCH3-203ENST00000595514 CLIP1P30622 1438 aa17.16■□□□□ 0.34
NOTCH3-203ENST00000595514 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
NOTCH3-203ENST00000595514 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
NOTCH3-203ENST00000595514 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
NOTCH3-203ENST00000595514 PTPRKQ15262 1439 aa17.14■□□□□ 0.33
NOTCH3-203ENST00000595514 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
NOTCH3-203ENST00000595514 ABCC1P33527 1531 aa17.12■□□□□ 0.33
NOTCH3-203ENST00000595514 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
NOTCH3-203ENST00000595514 SUPT6HQ7KZ85 1726 aaKnown RBP17.11■□□□□ 0.33
NOTCH3-203ENST00000595514 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
NOTCH3-203ENST00000595514 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
NOTCH3-203ENST00000595514 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
NOTCH3-203ENST00000595514 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
NOTCH3-203ENST00000595514 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
NOTCH3-203ENST00000595514 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
NOTCH3-203ENST00000595514 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
NOTCH3-203ENST00000595514 GGT6Q6P531 493 aa17.06■□□□□ 0.32
NOTCH3-203ENST00000595514 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
NOTCH3-203ENST00000595514 EEA1Q15075 1411 aa17.04■□□□□ 0.32
NOTCH3-203ENST00000595514 PREX2Q70Z35 1606 aa17.04■□□□□ 0.32
NOTCH3-203ENST00000595514 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
NOTCH3-203ENST00000595514 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
NOTCH3-203ENST00000595514 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.32
NOTCH3-203ENST00000595514 ANKLE2Q86XL3 938 aa17.02■□□□□ 0.32
NOTCH3-203ENST00000595514 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.31
NOTCH3-203ENST00000595514 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
NOTCH3-203ENST00000595514 A2MP01023 1474 aa17■□□□□ 0.31
NOTCH3-203ENST00000595514 VWDEQ8N2E2 1590 aa16.99■□□□□ 0.31
NOTCH3-203ENST00000595514 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
NOTCH3-203ENST00000595514 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
NOTCH3-203ENST00000595514 TNRQ92752 1358 aa16.97■□□□□ 0.31
NOTCH3-203ENST00000595514 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
NOTCH3-203ENST00000595514 ATP7AQ04656 1500 aa16.96■□□□□ 0.3
NOTCH3-203ENST00000595514 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.3
NOTCH3-203ENST00000595514 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.3
NOTCH3-203ENST00000595514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.95■□□□□ 0.3
NOTCH3-203ENST00000595514 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
NOTCH3-203ENST00000595514 ARHGAP35Q9NRY4 1499 aa16.94■□□□□ 0.3
NOTCH3-203ENST00000595514 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
NOTCH3-203ENST00000595514 LRRC7Q96NW7 1537 aa16.92■□□□□ 0.3
NOTCH3-203ENST00000595514 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
NOTCH3-203ENST00000595514 FBXO31Q5XUX0 539 aaPredicted RBP16.92■□□□□ 0.3
NOTCH3-203ENST00000595514 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms