RNA–Protein interactions for RNA: ENST00000595379.1

PAF1-203, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-203ENST00000595379 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
PAF1-203ENST00000595379 UHRF1BP1Q6BDS2 1440 aa16.58■□□□□ 0.24
PAF1-203ENST00000595379 NUP153P49790 1475 aaKnown RBP16.58■□□□□ 0.24
PAF1-203ENST00000595379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.24
PAF1-203ENST00000595379 ATP10AO60312 1499 aa16.57■□□□□ 0.24
PAF1-203ENST00000595379 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
PAF1-203ENST00000595379 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
PAF1-203ENST00000595379 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
PAF1-203ENST00000595379 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
PAF1-203ENST00000595379 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
PAF1-203ENST00000595379 C3P01024 1663 aa16.51■□□□□ 0.23
PAF1-203ENST00000595379 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
PAF1-203ENST00000595379 SCAPERQ9BY12 1400 aa16.49■□□□□ 0.23
PAF1-203ENST00000595379 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
PAF1-203ENST00000595379 PLCH2O75038 1416 aa16.45■□□□□ 0.22
PAF1-203ENST00000595379 PLEKHD1A6NEE1 506 aa16.45■□□□□ 0.22
PAF1-203ENST00000595379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
PAF1-203ENST00000595379 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
PAF1-203ENST00000595379 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
PAF1-203ENST00000595379 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
PAF1-203ENST00000595379 UBAP1LF5GYI3 381 aa16.44■□□□□ 0.22
PAF1-203ENST00000595379 KDM5CP41229 1560 aa16.42■□□□□ 0.22
PAF1-203ENST00000595379 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
PAF1-203ENST00000595379 CAMSAP1Q5T5Y3 1602 aa16.4■□□□□ 0.22
PAF1-203ENST00000595379 DIP2CQ9Y2E4 1556 aa16.39■□□□□ 0.21
PAF1-203ENST00000595379 AGLP35573 1532 aa16.39■□□□□ 0.21
PAF1-203ENST00000595379 HSPA1LP34931 641 aa16.38■□□□□ 0.21
PAF1-203ENST00000595379 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
PAF1-203ENST00000595379 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
PAF1-203ENST00000595379 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
PAF1-203ENST00000595379 NPATQ14207 1427 aa16.33■□□□□ 0.2
PAF1-203ENST00000595379 TCOF1Q13428 1488 aaKnown RBP16.33■□□□□ 0.2
PAF1-203ENST00000595379 PLA2R1Q13018 1463 aa16.32■□□□□ 0.2
PAF1-203ENST00000595379 AFAP1Q8N556 730 aa16.32■□□□□ 0.2
PAF1-203ENST00000595379 MYO5CQ9NQX4 1742 aa16.32■□□□□ 0.2
PAF1-203ENST00000595379 MLH3Q9UHC1 1453 aa16.31■□□□□ 0.2
PAF1-203ENST00000595379 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
PAF1-203ENST00000595379 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
PAF1-203ENST00000595379 ZNF142P52746 1687 aaPredicted RBP16.3■□□□□ 0.2
PAF1-203ENST00000595379 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
PAF1-203ENST00000595379 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
PAF1-203ENST00000595379 CDK13Q14004 1512 aaKnown RBP16.29■□□□□ 0.2
PAF1-203ENST00000595379 PKD2Q13563 968 aa16.28■□□□□ 0.2
PAF1-203ENST00000595379 RGS17Q9UGC6 210 aaPredicted RBP16.24■□□□□ 0.19
PAF1-203ENST00000595379 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
PAF1-203ENST00000595379 ZMYM3Q14202 1370 aa16.23■□□□□ 0.19
PAF1-203ENST00000595379 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
PAF1-203ENST00000595379 KIF14Q15058 1648 aa16.22■□□□□ 0.19
PAF1-203ENST00000595379 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.19
PAF1-203ENST00000595379 TOM1O60784 492 aa16.21■□□□□ 0.19
PAF1-203ENST00000595379 PIP4K2BP78356 416 aa16.21■□□□□ 0.19
PAF1-203ENST00000595379 SUPT6HQ7KZ85 1726 aaKnown RBP16.21■□□□□ 0.19
PAF1-203ENST00000595379 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.19
PAF1-203ENST00000595379 CPS1P31327 1500 aa16.2■□□□□ 0.18
PAF1-203ENST00000595379 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
PAF1-203ENST00000595379 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
PAF1-203ENST00000595379 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
PAF1-203ENST00000595379 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
PAF1-203ENST00000595379 ARHGAP5Q13017 1502 aa16.17■□□□□ 0.18
PAF1-203ENST00000595379 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
PAF1-203ENST00000595379 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
PAF1-203ENST00000595379 ABCC1P33527 1531 aa16.15■□□□□ 0.18
PAF1-203ENST00000595379 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
PAF1-203ENST00000595379 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
PAF1-203ENST00000595379 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
PAF1-203ENST00000595379 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
PAF1-203ENST00000595379 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.17
PAF1-203ENST00000595379 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
PAF1-203ENST00000595379 POLR1AO95602 1720 aaPredicted RBP16.12■□□□□ 0.17
PAF1-203ENST00000595379 TROQ12816 1431 aaPredicted RBP16.11■□□□□ 0.17
PAF1-203ENST00000595379 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
PAF1-203ENST00000595379 PREX2Q70Z35 1606 aa16.09■□□□□ 0.17
PAF1-203ENST00000595379 MYT1LQ9UL68 1186 aa16.09■□□□□ 0.17
PAF1-203ENST00000595379 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
PAF1-203ENST00000595379 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
PAF1-203ENST00000595379 SAMD9LQ8IVG5 1584 aa16.08■□□□□ 0.16
PAF1-203ENST00000595379 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
PAF1-203ENST00000595379 STRCP1A6NGW2 1772 aa16.06■□□□□ 0.16
PAF1-203ENST00000595379 POTEAQ6S8J7 498 aa16.05■□□□□ 0.16
PAF1-203ENST00000595379 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
PAF1-203ENST00000595379 MED14O60244 1454 aa16.03■□□□□ 0.16
PAF1-203ENST00000595379 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.15
PAF1-203ENST00000595379 LRRC7Q96NW7 1537 aa16.01■□□□□ 0.15
PAF1-203ENST00000595379 DEPDC5O75140 1603 aa16■□□□□ 0.15
PAF1-203ENST00000595379 FMN1Q68DA7 1419 aa16■□□□□ 0.15
PAF1-203ENST00000595379 RNF17Q9BXT8 1623 aaKnown RBP15.99■□□□□ 0.15
PAF1-203ENST00000595379 CLIP1P30622 1438 aa15.99■□□□□ 0.15
PAF1-203ENST00000595379 INO80Q9ULG1 1556 aaPredicted RBP15.99■□□□□ 0.15
PAF1-203ENST00000595379 A2MP01023 1474 aa15.97■□□□□ 0.15
PAF1-203ENST00000595379 ATP7AQ04656 1500 aa15.97■□□□□ 0.15
PAF1-203ENST00000595379 SETD1AO15047 1707 aaKnown RBP15.96■□□□□ 0.15
PAF1-203ENST00000595379 SYNMO15061 1565 aa15.96■□□□□ 0.14
PAF1-203ENST00000595379 ARHGAP35Q9NRY4 1499 aa15.95■□□□□ 0.14
PAF1-203ENST00000595379 NPHP4O75161 1426 aaPredicted RBP15.94■□□□□ 0.14
PAF1-203ENST00000595379 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
PAF1-203ENST00000595379 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
PAF1-203ENST00000595379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.94■□□□□ 0.14
PAF1-203ENST00000595379 SYCP2Q9BX26 1530 aa15.94■□□□□ 0.14
PAF1-203ENST00000595379 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
PAF1-203ENST00000595379 IQGAP1P46940 1657 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms