RNA–Protein interactions for RNA: ENST00000593261.1

NEK8-208, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-208ENST00000593261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.78□□□□□ -0.84
NEK8-208ENST00000593261 LOC105371045A0A1W2PR82 267 aa9.77□□□□□ -0.85
NEK8-208ENST00000593261 HRCP23327 699 aa9.77□□□□□ -0.85
NEK8-208ENST00000593261 PRXQ9BXM0 1461 aa9.77□□□□□ -0.85
NEK8-208ENST00000593261 CEBPAP49715 358 aaPredicted RBP9.76□□□□□ -0.85
NEK8-208ENST00000593261 LTBP4Q8N2S1 1624 aa9.75□□□□□ -0.85
NEK8-208ENST00000593261 UHRF1BP1Q6BDS2 1440 aa9.75□□□□□ -0.85
NEK8-208ENST00000593261 C3P01024 1663 aa9.75□□□□□ -0.85
NEK8-208ENST00000593261 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
NEK8-208ENST00000593261 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
NEK8-208ENST00000593261 FAM9AQ8IZU1 332 aaPredicted RBP9.72□□□□□ -0.85
NEK8-208ENST00000593261 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
NEK8-208ENST00000593261 MYO5CQ9NQX4 1742 aa9.72□□□□□ -0.85
NEK8-208ENST00000593261 CDK13Q14004 1512 aaKnown RBP9.72□□□□□ -0.85
NEK8-208ENST00000593261 RANGAP1P46060 587 aaPredicted RBP9.71□□□□□ -0.86
NEK8-208ENST00000593261 SCAPERQ9BY12 1400 aa9.71□□□□□ -0.86
NEK8-208ENST00000593261 ATP10AO60312 1499 aa9.71□□□□□ -0.86
NEK8-208ENST00000593261 DMRT2Q9Y5R5 561 aa9.7□□□□□ -0.86
NEK8-208ENST00000593261 PTPRTO14522 1441 aa9.7□□□□□ -0.86
NEK8-208ENST00000593261 DIP2CQ9Y2E4 1556 aa9.7□□□□□ -0.86
NEK8-208ENST00000593261 SETD1BQ9UPS6 1966 aaKnown RBP9.7□□□□□ -0.86
NEK8-208ENST00000593261 MED1Q15648 1581 aaPredicted RBP9.69□□□□□ -0.86
NEK8-208ENST00000593261 IQSEC2Q5JU85 1478 aa9.69□□□□□ -0.86
NEK8-208ENST00000593261 ABCA6Q8N139 1617 aa9.69□□□□□ -0.86
NEK8-208ENST00000593261 NCOA1Q15788 1441 aa9.67□□□□□ -0.86
NEK8-208ENST00000593261 PLEKHD1A6NEE1 506 aa9.67□□□□□ -0.86
NEK8-208ENST00000593261 SUPT6HQ7KZ85 1726 aaKnown RBP9.67□□□□□ -0.86
NEK8-208ENST00000593261 KIF14Q15058 1648 aa9.67□□□□□ -0.86
NEK8-208ENST00000593261 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
NEK8-208ENST00000593261 KDM5CP41229 1560 aa9.67□□□□□ -0.86
NEK8-208ENST00000593261 ZNF518AQ6AHZ1 1483 aa9.65□□□□□ -0.87
NEK8-208ENST00000593261 PLCH2O75038 1416 aa9.65□□□□□ -0.87
NEK8-208ENST00000593261 ZNF335Q9H4Z2 1342 aaPredicted RBP9.64□□□□□ -0.87
NEK8-208ENST00000593261 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
NEK8-208ENST00000593261 ARHGAP5Q13017 1502 aa9.63□□□□□ -0.87
NEK8-208ENST00000593261 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
NEK8-208ENST00000593261 MYO3AQ8NEV4 1616 aa9.63□□□□□ -0.87
NEK8-208ENST00000593261 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
NEK8-208ENST00000593261 MYT1LQ9UL68 1186 aa9.62□□□□□ -0.87
NEK8-208ENST00000593261 ZNF142P52746 1687 aaPredicted RBP9.61□□□□□ -0.87
NEK8-208ENST00000593261 SCAF1Q9H7N4 1312 aaKnown RBP9.61□□□□□ -0.87
NEK8-208ENST00000593261 TRAPPC8Q9Y2L5 1435 aa9.61□□□□□ -0.87
NEK8-208ENST00000593261 ITSN2Q9NZM3 1697 aa9.61□□□□□ -0.87
NEK8-208ENST00000593261 CDC42BPBQ9Y5S2 1711 aa9.6□□□□□ -0.87
NEK8-208ENST00000593261 AFAP1Q8N556 730 aa9.6□□□□□ -0.87
NEK8-208ENST00000593261 MROH2AA6NES4 1674 aa9.6□□□□□ -0.87
NEK8-208ENST00000593261 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
NEK8-208ENST00000593261 NCKAP5LQ9HCH0 1330 aa9.58□□□□□ -0.88
NEK8-208ENST00000593261 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
NEK8-208ENST00000593261 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
NEK8-208ENST00000593261 ABCC1P33527 1531 aa9.58□□□□□ -0.88
NEK8-208ENST00000593261 AGLP35573 1532 aa9.58□□□□□ -0.88
NEK8-208ENST00000593261 PREX2Q70Z35 1606 aa9.58□□□□□ -0.88
NEK8-208ENST00000593261 ESF1Q9H501 851 aaKnown RBP9.58□□□□□ -0.88
NEK8-208ENST00000593261 CEP170BQ9Y4F5 1589 aaPredicted RBP9.58□□□□□ -0.88
NEK8-208ENST00000593261 HSPA1LP34931 641 aa9.57□□□□□ -0.88
NEK8-208ENST00000593261 PIP4K2BP78356 416 aa9.57□□□□□ -0.88
NEK8-208ENST00000593261 EFCAB2Q5VUJ9 269 aa9.57□□□□□ -0.88
NEK8-208ENST00000593261 ATP1B4Q9UN42 357 aaPredicted RBP9.56□□□□□ -0.88
NEK8-208ENST00000593261 POLR1AO95602 1720 aaPredicted RBP9.56□□□□□ -0.88
NEK8-208ENST00000593261 CNTLNQ9NXG0 1405 aa9.56□□□□□ -0.88
NEK8-208ENST00000593261 MLH3Q9UHC1 1453 aa9.55□□□□□ -0.88
NEK8-208ENST00000593261 PHF23Q9BUL5 403 aaPredicted RBP9.55□□□□□ -0.88
NEK8-208ENST00000593261 NPATQ14207 1427 aa9.55□□□□□ -0.88
NEK8-208ENST00000593261 TCOF1Q13428 1488 aaKnown RBP9.54□□□□□ -0.88
NEK8-208ENST00000593261 SENP3Q9H4L4 574 aaPredicted RBP9.54□□□□□ -0.88
NEK8-208ENST00000593261 PLA2R1Q13018 1463 aa9.53□□□□□ -0.88
NEK8-208ENST00000593261 CSRNP3Q8WYN3 585 aa9.53□□□□□ -0.88
NEK8-208ENST00000593261 CDC42BPAQ5VT25 1732 aa9.53□□□□□ -0.88
NEK8-208ENST00000593261 CLIP1P30622 1438 aa9.52□□□□□ -0.89
NEK8-208ENST00000593261 TROQ12816 1431 aaPredicted RBP9.52□□□□□ -0.89
NEK8-208ENST00000593261 SAMD9LQ8IVG5 1584 aa9.51□□□□□ -0.89
NEK8-208ENST00000593261 NEURL4Q96JN8 1562 aa9.51□□□□□ -0.89
NEK8-208ENST00000593261 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
NEK8-208ENST00000593261 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
NEK8-208ENST00000593261 PPP6R1Q9UPN7 881 aa9.5□□□□□ -0.89
NEK8-208ENST00000593261 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
NEK8-208ENST00000593261 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
NEK8-208ENST00000593261 EHMT2Q96KQ7 1210 aa9.49□□□□□ -0.89
NEK8-208ENST00000593261 CPS1P31327 1500 aa9.49□□□□□ -0.89
NEK8-208ENST00000593261 PLXNC1O60486 1568 aa9.49□□□□□ -0.89
NEK8-208ENST00000593261 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
NEK8-208ENST00000593261 FMN1Q68DA7 1419 aa9.48□□□□□ -0.89
NEK8-208ENST00000593261 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
NEK8-208ENST00000593261 PPARGC1BQ86YN6 1023 aaKnown RBP9.48□□□□□ -0.89
NEK8-208ENST00000593261 INO80Q9ULG1 1556 aaPredicted RBP9.48□□□□□ -0.89
NEK8-208ENST00000593261 SETD1AO15047 1707 aaKnown RBP9.48□□□□□ -0.89
NEK8-208ENST00000593261 EEA1Q15075 1411 aa9.48□□□□□ -0.89
NEK8-208ENST00000593261 PKD2Q13563 968 aa9.47□□□□□ -0.89
NEK8-208ENST00000593261 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
NEK8-208ENST00000593261 SHANK2Q9UPX8 1470 aa9.47□□□□□ -0.89
NEK8-208ENST00000593261 VWDEQ8N2E2 1590 aa9.46□□□□□ -0.89
NEK8-208ENST00000593261 CDK11AQ9UQ88 783 aaPredicted RBP9.46□□□□□ -0.9
NEK8-208ENST00000593261 A2ML1A8K2U0 1454 aa9.46□□□□□ -0.9
NEK8-208ENST00000593261 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
NEK8-208ENST00000593261 STRCP1A6NGW2 1772 aa9.45□□□□□ -0.9
NEK8-208ENST00000593261 TOM1O60784 492 aa9.45□□□□□ -0.9
NEK8-208ENST00000593261 ZEB1P37275 1124 aaPredicted RBP9.45□□□□□ -0.9
NEK8-208ENST00000593261 IQGAP1P46940 1657 aa9.43□□□□□ -0.9
NEK8-208ENST00000593261 ADGBQ8N7X0 1667 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms