RNA–Protein interactions for RNA: ENST00000592423.1

RDH13-220, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 2,811 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-220ENST00000592423 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
RDH13-220ENST00000592423 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
RDH13-220ENST00000592423 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
RDH13-220ENST00000592423 CTTNBP2Q8WZ74 1663 aa17.22■□□□□ 0.35
RDH13-220ENST00000592423 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
RDH13-220ENST00000592423 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
RDH13-220ENST00000592423 TDRD9Q8NDG6 1382 aaKnown RBP17.2■□□□□ 0.34
RDH13-220ENST00000592423 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
RDH13-220ENST00000592423 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
RDH13-220ENST00000592423 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
RDH13-220ENST00000592423 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
RDH13-220ENST00000592423 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
RDH13-220ENST00000592423 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
RDH13-220ENST00000592423 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
RDH13-220ENST00000592423 NPM2Q86SE8 214 aaKnown RBP17.15■□□□□ 0.34
RDH13-220ENST00000592423 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
RDH13-220ENST00000592423 HECW1Q76N89 1606 aa17.13■□□□□ 0.33
RDH13-220ENST00000592423 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
RDH13-220ENST00000592423 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
RDH13-220ENST00000592423 IPO9Q96P70 1041 aaKnown RBP17.12■□□□□ 0.33
RDH13-220ENST00000592423 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
RDH13-220ENST00000592423 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
RDH13-220ENST00000592423 CUL7Q14999 1698 aa17.12■□□□□ 0.33
RDH13-220ENST00000592423 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
RDH13-220ENST00000592423 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
RDH13-220ENST00000592423 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
RDH13-220ENST00000592423 GCC2Q8IWJ2 1684 aa17.09■□□□□ 0.33
RDH13-220ENST00000592423 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
RDH13-220ENST00000592423 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
RDH13-220ENST00000592423 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.33
RDH13-220ENST00000592423 SAMD9Q5K651 1589 aa17.08■□□□□ 0.32
RDH13-220ENST00000592423 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
RDH13-220ENST00000592423 CDK13Q14004 1512 aaKnown RBP17.06■□□□□ 0.32
RDH13-220ENST00000592423 RTN4Q9NQC3 1192 aaKnown RBP17.06■□□□□ 0.32
RDH13-220ENST00000592423 DHX29Q7Z478 1369 aaKnown RBP17.05■□□□□ 0.32
RDH13-220ENST00000592423 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
RDH13-220ENST00000592423 ANO8Q9HCE9 1232 aaPredicted RBP17.05■□□□□ 0.32
RDH13-220ENST00000592423 LAS1LQ9Y4W2 734 aaKnown RBP17.05■□□□□ 0.32
RDH13-220ENST00000592423 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
RDH13-220ENST00000592423 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
RDH13-220ENST00000592423 ARHGEF11O15085 1522 aa17.04■□□□□ 0.32
RDH13-220ENST00000592423 TMC1Q8TDI8 760 aa17.04■□□□□ 0.32
RDH13-220ENST00000592423 TCOF1Q13428 1488 aaKnown RBP17.04■□□□□ 0.32
RDH13-220ENST00000592423 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
RDH13-220ENST00000592423 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.32
RDH13-220ENST00000592423 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.31
RDH13-220ENST00000592423 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
RDH13-220ENST00000592423 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
RDH13-220ENST00000592423 USP47Q96K76 1375 aa17■□□□□ 0.31
RDH13-220ENST00000592423 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
RDH13-220ENST00000592423 BCORL1Q5H9F3 1711 aa16.99■□□□□ 0.31
RDH13-220ENST00000592423 EPRSP07814 1512 aaKnown RBP16.98■□□□□ 0.31
RDH13-220ENST00000592423 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
RDH13-220ENST00000592423 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
RDH13-220ENST00000592423 DAPK1P53355 1430 aa16.96■□□□□ 0.31
RDH13-220ENST00000592423 PRKCSHP14314 528 aaPredicted RBP16.96■□□□□ 0.3
RDH13-220ENST00000592423 DAXXQ9UER7 740 aaPredicted RBP16.95■□□□□ 0.3
RDH13-220ENST00000592423 ZNF608Q9ULD9 1512 aaPredicted RBP16.94■□□□□ 0.3
RDH13-220ENST00000592423 ABCC5O15440 1437 aa16.94■□□□□ 0.3
RDH13-220ENST00000592423 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
RDH13-220ENST00000592423 NEFMP07197 916 aa16.94■□□□□ 0.3
RDH13-220ENST00000592423 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
RDH13-220ENST00000592423 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
RDH13-220ENST00000592423 MIA2Q96PC5 1412 aa16.93■□□□□ 0.3
RDH13-220ENST00000592423 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
RDH13-220ENST00000592423 PDE4AP27815 886 aa16.92■□□□□ 0.3
RDH13-220ENST00000592423 PKD2Q13563 968 aa16.92■□□□□ 0.3
RDH13-220ENST00000592423 PLIN1O60240 522 aa16.91■□□□□ 0.3
RDH13-220ENST00000592423 CARD11Q9BXL7 1154 aa16.9■□□□□ 0.3
RDH13-220ENST00000592423 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
RDH13-220ENST00000592423 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
RDH13-220ENST00000592423 ST20-MTHFSA0A0A6YYL1 179 aa16.88■□□□□ 0.29
RDH13-220ENST00000592423 PZPP20742 1482 aa16.88■□□□□ 0.29
RDH13-220ENST00000592423 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
RDH13-220ENST00000592423 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
RDH13-220ENST00000592423 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
RDH13-220ENST00000592423 BACH2Q9BYV9 841 aa16.85■□□□□ 0.29
RDH13-220ENST00000592423 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
RDH13-220ENST00000592423 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
RDH13-220ENST00000592423 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
RDH13-220ENST00000592423 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
RDH13-220ENST00000592423 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.28
RDH13-220ENST00000592423 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
RDH13-220ENST00000592423 KDM5CP41229 1560 aa16.82■□□□□ 0.28
RDH13-220ENST00000592423 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
RDH13-220ENST00000592423 MYBBP1AQ9BQG0 1328 aaKnown RBP16.82■□□□□ 0.28
RDH13-220ENST00000592423 MBD5Q9P267 1494 aa16.82■□□□□ 0.28
RDH13-220ENST00000592423 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
RDH13-220ENST00000592423 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
RDH13-220ENST00000592423 KIAA1107Q9UPP5 1409 aa16.8■□□□□ 0.28
RDH13-220ENST00000592423 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
RDH13-220ENST00000592423 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
RDH13-220ENST00000592423 CHD1O14646 1710 aa16.78■□□□□ 0.28
RDH13-220ENST00000592423 BRD4O60885 1362 aaPredicted RBP16.77■□□□□ 0.28
RDH13-220ENST00000592423 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
RDH13-220ENST00000592423 BRPF3Q9ULD4 1205 aa16.77■□□□□ 0.28
RDH13-220ENST00000592423 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.28
RDH13-220ENST00000592423 KIF14Q15058 1648 aa16.76■□□□□ 0.27
RDH13-220ENST00000592423 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
RDH13-220ENST00000592423 RALBP1Q15311 655 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms