RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 FANCAO15360 1455 aa21.8■■□□□ 1.08
LSM7-207ENST00000591745 HECW1Q76N89 1606 aa21.8■■□□□ 1.08
LSM7-207ENST00000591745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.8■■□□□ 1.08
LSM7-207ENST00000591745 PREX1Q8TCU6 1659 aa21.79■■□□□ 1.08
LSM7-207ENST00000591745 SOCS7O14512 581 aa21.79■■□□□ 1.08
LSM7-207ENST00000591745 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
LSM7-207ENST00000591745 CLIP1P30622 1438 aa21.78■■□□□ 1.08
LSM7-207ENST00000591745 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
LSM7-207ENST00000591745 SPATA31D1Q6ZQQ2 1576 aa21.76■■□□□ 1.07
LSM7-207ENST00000591745 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
LSM7-207ENST00000591745 MLECQ14165 292 aa21.74■■□□□ 1.07
LSM7-207ENST00000591745 ARHGEF12Q9NZN5 1544 aa21.74■■□□□ 1.07
LSM7-207ENST00000591745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
LSM7-207ENST00000591745 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
LSM7-207ENST00000591745 POGZQ7Z3K3 1410 aa21.71■■□□□ 1.07
LSM7-207ENST00000591745 CEBPAP49715 358 aaPredicted RBP21.66■■□□□ 1.06
LSM7-207ENST00000591745 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
LSM7-207ENST00000591745 CDK13Q14004 1512 aaKnown RBP21.63■■□□□ 1.05
LSM7-207ENST00000591745 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
LSM7-207ENST00000591745 LTBP4Q8N2S1 1624 aa21.61■■□□□ 1.05
LSM7-207ENST00000591745 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
LSM7-207ENST00000591745 ATP10AO60312 1499 aa21.59■■□□□ 1.05
LSM7-207ENST00000591745 C3P01024 1663 aa21.59■■□□□ 1.05
LSM7-207ENST00000591745 C9orf84Q5VXU9 1444 aa21.58■■□□□ 1.05
LSM7-207ENST00000591745 RANGAP1P46060 587 aaPredicted RBP21.58■■□□□ 1.05
LSM7-207ENST00000591745 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
LSM7-207ENST00000591745 MYO5CQ9NQX4 1742 aa21.55■■□□□ 1.04
LSM7-207ENST00000591745 APLP2Q06481 763 aa21.54■■□□□ 1.04
LSM7-207ENST00000591745 PLCH2O75038 1416 aa21.54■■□□□ 1.04
LSM7-207ENST00000591745 SETD1BQ9UPS6 1966 aaKnown RBP21.54■■□□□ 1.04
LSM7-207ENST00000591745 UHRF1BP1Q6BDS2 1440 aa21.53■■□□□ 1.04
LSM7-207ENST00000591745 DIP2CQ9Y2E4 1556 aa21.53■■□□□ 1.04
LSM7-207ENST00000591745 KIF14Q15058 1648 aa21.52■■□□□ 1.04
LSM7-207ENST00000591745 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
LSM7-207ENST00000591745 KDM5CP41229 1560 aa21.51■■□□□ 1.03
LSM7-207ENST00000591745 ARHGAP35Q9NRY4 1499 aa21.51■■□□□ 1.03
LSM7-207ENST00000591745 ABCA6Q8N139 1617 aa21.51■■□□□ 1.03
LSM7-207ENST00000591745 PTPRTO14522 1441 aa21.5■■□□□ 1.03
LSM7-207ENST00000591745 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
LSM7-207ENST00000591745 DMRT2Q9Y5R5 561 aa21.44■■□□□ 1.02
LSM7-207ENST00000591745 FMN1Q68DA7 1419 aa21.44■■□□□ 1.02
LSM7-207ENST00000591745 REREQ9P2R6 1566 aa21.44■■□□□ 1.02
LSM7-207ENST00000591745 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
LSM7-207ENST00000591745 CDC42BPBQ9Y5S2 1711 aa21.41■■□□□ 1.02
LSM7-207ENST00000591745 IQSEC2Q5JU85 1478 aa21.41■■□□□ 1.02
LSM7-207ENST00000591745 ZNF518AQ6AHZ1 1483 aa21.41■■□□□ 1.02
LSM7-207ENST00000591745 NCOA1Q15788 1441 aa21.41■■□□□ 1.02
LSM7-207ENST00000591745 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
LSM7-207ENST00000591745 ARHGAP5Q13017 1502 aa21.36■■□□□ 1.01
LSM7-207ENST00000591745 CAMSAP1Q5T5Y3 1602 aa21.36■■□□□ 1.01
LSM7-207ENST00000591745 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
LSM7-207ENST00000591745 EFCAB2Q5VUJ9 269 aa21.35■■□□□ 1.01
LSM7-207ENST00000591745 KIDINS220Q9ULH0 1771 aa21.35■■□□□ 1.01
LSM7-207ENST00000591745 AGLP35573 1532 aa21.34■■□□□ 1.01
LSM7-207ENST00000591745 TRAPPC8Q9Y2L5 1435 aa21.33■■□□□ 1.01
LSM7-207ENST00000591745 FYCO1Q9BQS8 1478 aa21.32■■□□□ 1
LSM7-207ENST00000591745 ABCC1P33527 1531 aa21.31■■□□□ 1
LSM7-207ENST00000591745 PIAS4Q8N2W9 510 aaPredicted RBP21.31■■□□□ 1
LSM7-207ENST00000591745 MLH3Q9UHC1 1453 aa21.31■■□□□ 1
LSM7-207ENST00000591745 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
LSM7-207ENST00000591745 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
LSM7-207ENST00000591745 PREX2Q70Z35 1606 aa21.29■■□□□ 1
LSM7-207ENST00000591745 MROH2AA6NES4 1674 aa21.29■■□□□ 1
LSM7-207ENST00000591745 TROQ12816 1431 aaPredicted RBP21.27■■□□□ 1
LSM7-207ENST00000591745 ZNF142P52746 1687 aaPredicted RBP21.27■■□□□ 1
LSM7-207ENST00000591745 MYO3AQ8NEV4 1616 aa21.26■□□□□ 0.99
LSM7-207ENST00000591745 PCGF6Q9BYE7 350 aa21.26■□□□□ 0.99
LSM7-207ENST00000591745 MED1Q15648 1581 aaPredicted RBP21.26■□□□□ 0.99
LSM7-207ENST00000591745 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
LSM7-207ENST00000591745 NCKAP5LQ9HCH0 1330 aa21.26■□□□□ 0.99
LSM7-207ENST00000591745 CDC42BPAQ5VT25 1732 aa21.24■□□□□ 0.99
LSM7-207ENST00000591745 CLTCQ00610 1675 aaKnown RBP21.23■□□□□ 0.99
LSM7-207ENST00000591745 UBAP1LF5GYI3 381 aa21.22■□□□□ 0.99
LSM7-207ENST00000591745 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
LSM7-207ENST00000591745 ATP1B4Q9UN42 357 aaPredicted RBP21.22■□□□□ 0.99
LSM7-207ENST00000591745 NPATQ14207 1427 aa21.19■□□□□ 0.98
LSM7-207ENST00000591745 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
LSM7-207ENST00000591745 SAMD9LQ8IVG5 1584 aa21.19■□□□□ 0.98
LSM7-207ENST00000591745 TCOF1Q13428 1488 aaKnown RBP21.18■□□□□ 0.98
LSM7-207ENST00000591745 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
LSM7-207ENST00000591745 CEP170BQ9Y4F5 1589 aaPredicted RBP21.18■□□□□ 0.98
LSM7-207ENST00000591745 CCDC18Q5T9S5 1454 aa21.17■□□□□ 0.98
LSM7-207ENST00000591745 PLA2R1Q13018 1463 aa21.14■□□□□ 0.98
LSM7-207ENST00000591745 ZMYM3Q14202 1370 aa21.14■□□□□ 0.98
LSM7-207ENST00000591745 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
LSM7-207ENST00000591745 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
LSM7-207ENST00000591745 ALKQ9UM73 1620 aa21.12■□□□□ 0.97
LSM7-207ENST00000591745 HSPA1LP34931 641 aa21.12■□□□□ 0.97
LSM7-207ENST00000591745 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
LSM7-207ENST00000591745 PTPRKQ15262 1439 aa21.11■□□□□ 0.97
LSM7-207ENST00000591745 LRRC9Q6ZRR7 1453 aa21.1■□□□□ 0.97
LSM7-207ENST00000591745 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
LSM7-207ENST00000591745 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
LSM7-207ENST00000591745 INO80Q9ULG1 1556 aaPredicted RBP21.09■□□□□ 0.97
LSM7-207ENST00000591745 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
LSM7-207ENST00000591745 DNMT1P26358 1616 aaKnown RBP21.07■□□□□ 0.96
LSM7-207ENST00000591745 ATP7AQ04656 1500 aa21.05■□□□□ 0.96
LSM7-207ENST00000591745 PPARGC1BQ86YN6 1023 aaKnown RBP21.04■□□□□ 0.96
LSM7-207ENST00000591745 PKD2Q13563 968 aa21.03■□□□□ 0.96
LSM7-207ENST00000591745 PIP4K2BP78356 416 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms