RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 UBAP1LF5GYI3 381 aa15.43■□□□□ 0.06
AP3D1-208ENST00000590683 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
AP3D1-208ENST00000590683 CFAP74Q9C0B2 1584 aa15.39■□□□□ 0.05
AP3D1-208ENST00000590683 MAGI2Q86UL8 1455 aa15.37■□□□□ 0.05
AP3D1-208ENST00000590683 C3P01024 1663 aa15.37■□□□□ 0.05
AP3D1-208ENST00000590683 HSPA1LP34931 641 aa15.35■□□□□ 0.05
AP3D1-208ENST00000590683 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
AP3D1-208ENST00000590683 ZNF335Q9H4Z2 1342 aaPredicted RBP15.34■□□□□ 0.05
AP3D1-208ENST00000590683 RAPGEF6Q8TEU7 1601 aa15.33■□□□□ 0.04
AP3D1-208ENST00000590683 P3H3Q8IVL6 736 aa15.33■□□□□ 0.04
AP3D1-208ENST00000590683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
AP3D1-208ENST00000590683 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
AP3D1-208ENST00000590683 C9orf84Q5VXU9 1444 aa15.32■□□□□ 0.04
AP3D1-208ENST00000590683 ATP10AO60312 1499 aa15.32■□□□□ 0.04
AP3D1-208ENST00000590683 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
AP3D1-208ENST00000590683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.3■□□□□ 0.04
AP3D1-208ENST00000590683 CAMSAP1Q5T5Y3 1602 aa15.29■□□□□ 0.04
AP3D1-208ENST00000590683 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
AP3D1-208ENST00000590683 PIP4K2BP78356 416 aa15.26■□□□□ 0.03
AP3D1-208ENST00000590683 NUP153P49790 1475 aaKnown RBP15.25■□□□□ 0.03
AP3D1-208ENST00000590683 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
AP3D1-208ENST00000590683 NCKAP5LQ9HCH0 1330 aa15.24■□□□□ 0.03
AP3D1-208ENST00000590683 FAM9AQ8IZU1 332 aaPredicted RBP15.24■□□□□ 0.03
AP3D1-208ENST00000590683 TRAPPC8Q9Y2L5 1435 aa15.23■□□□□ 0.03
AP3D1-208ENST00000590683 SUPT6HQ7KZ85 1726 aaKnown RBP15.21■□□□□ 0.03
AP3D1-208ENST00000590683 SAMD9Q5K651 1589 aa15.19■□□□□ 0.02
AP3D1-208ENST00000590683 PLEKHD1A6NEE1 506 aa15.18■□□□□ 0.02
AP3D1-208ENST00000590683 DIP2CQ9Y2E4 1556 aa15.18■□□□□ 0.02
AP3D1-208ENST00000590683 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
AP3D1-208ENST00000590683 ABCA6Q8N139 1617 aa15.14■□□□□ 0.01
AP3D1-208ENST00000590683 TOM1O60784 492 aa15.14■□□□□ 0.01
AP3D1-208ENST00000590683 PLCH2O75038 1416 aa15.13■□□□□ 0.01
AP3D1-208ENST00000590683 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
AP3D1-208ENST00000590683 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
AP3D1-208ENST00000590683 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
AP3D1-208ENST00000590683 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
AP3D1-208ENST00000590683 KDM5CP41229 1560 aa15.12■□□□□ 0.01
AP3D1-208ENST00000590683 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
AP3D1-208ENST00000590683 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
AP3D1-208ENST00000590683 MYO3AQ8NEV4 1616 aa15.11■□□□□ 0.01
AP3D1-208ENST00000590683 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
AP3D1-208ENST00000590683 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
AP3D1-208ENST00000590683 AGLP35573 1532 aa15.11■□□□□ 0.01
AP3D1-208ENST00000590683 PLA2R1Q13018 1463 aa15.1■□□□□ 0.01
AP3D1-208ENST00000590683 ZNF518AQ6AHZ1 1483 aa15.1■□□□□ 0.01
AP3D1-208ENST00000590683 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
AP3D1-208ENST00000590683 PKD2Q13563 968 aa15.09■□□□□ 0.01
AP3D1-208ENST00000590683 AFAP1Q8N556 730 aa15.09■□□□□ 0.01
AP3D1-208ENST00000590683 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
AP3D1-208ENST00000590683 SETD1AO15047 1707 aaKnown RBP15.09■□□□□ 0.01
AP3D1-208ENST00000590683 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
AP3D1-208ENST00000590683 NPATQ14207 1427 aa15.08■□□□□ 0
AP3D1-208ENST00000590683 CEP170BQ9Y4F5 1589 aaPredicted RBP15.07■□□□□ 0
AP3D1-208ENST00000590683 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
AP3D1-208ENST00000590683 CPS1P31327 1500 aa15.07■□□□□ 0
AP3D1-208ENST00000590683 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
AP3D1-208ENST00000590683 EFCAB2Q5VUJ9 269 aa15.04■□□□□ -0
AP3D1-208ENST00000590683 POLR1AO95602 1720 aaPredicted RBP15.03■□□□□ -0
AP3D1-208ENST00000590683 CLTCQ00610 1675 aaKnown RBP15.03■□□□□ -0
AP3D1-208ENST00000590683 SHANK2Q9UPX8 1470 aa15.02■□□□□ -0
AP3D1-208ENST00000590683 POTEAQ6S8J7 498 aa15.02■□□□□ -0
AP3D1-208ENST00000590683 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
AP3D1-208ENST00000590683 ZMYM3Q14202 1370 aa15.01□□□□□ -0.01
AP3D1-208ENST00000590683 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
AP3D1-208ENST00000590683 KIF14Q15058 1648 aa15□□□□□ -0.01
AP3D1-208ENST00000590683 NEURL4Q96JN8 1562 aa15□□□□□ -0.01
AP3D1-208ENST00000590683 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
AP3D1-208ENST00000590683 KIDINS220Q9ULH0 1771 aa14.99□□□□□ -0.01
AP3D1-208ENST00000590683 ARHGAP5Q13017 1502 aa14.99□□□□□ -0.01
AP3D1-208ENST00000590683 DNMT1P26358 1616 aaKnown RBP14.97□□□□□ -0.01
AP3D1-208ENST00000590683 VWDEQ8N2E2 1590 aa14.97□□□□□ -0.01
AP3D1-208ENST00000590683 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
AP3D1-208ENST00000590683 ITSN2Q9NZM3 1697 aa14.95□□□□□ -0.02
AP3D1-208ENST00000590683 STRCP1A6NGW2 1772 aa14.95□□□□□ -0.02
AP3D1-208ENST00000590683 RNF17Q9BXT8 1623 aaKnown RBP14.92□□□□□ -0.02
AP3D1-208ENST00000590683 A2ML1A8K2U0 1454 aa14.91□□□□□ -0.02
AP3D1-208ENST00000590683 ABCC1P33527 1531 aa14.91□□□□□ -0.02
AP3D1-208ENST00000590683 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
AP3D1-208ENST00000590683 SRCAPQ6ZRS2 3230 aa14.87□□□□□ -0.03
AP3D1-208ENST00000590683 PREX2Q70Z35 1606 aa14.85□□□□□ -0.03
AP3D1-208ENST00000590683 UPF1Q92900 1129 aaKnown RBP eCLIP14.85□□□□□ -0.03
AP3D1-208ENST00000590683 SYNMO15061 1565 aa14.84□□□□□ -0.03
AP3D1-208ENST00000590683 SAMD9LQ8IVG5 1584 aa14.83□□□□□ -0.04
AP3D1-208ENST00000590683 IQGAP1P46940 1657 aa14.83□□□□□ -0.04
AP3D1-208ENST00000590683 XIRP1Q702N8 1843 aaKnown RBP14.82□□□□□ -0.04
AP3D1-208ENST00000590683 PLXNC1O60486 1568 aa14.81□□□□□ -0.04
AP3D1-208ENST00000590683 LRRIQ1Q96JM4 1722 aa14.81□□□□□ -0.04
AP3D1-208ENST00000590683 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
AP3D1-208ENST00000590683 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
AP3D1-208ENST00000590683 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
AP3D1-208ENST00000590683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.048e-6■■□□□ 11.9
AP3D1-208ENST00000590683 DEPDC5O75140 1603 aa14.8□□□□□ -0.04
AP3D1-208ENST00000590683 GGT6Q6P531 493 aa14.79□□□□□ -0.04
AP3D1-208ENST00000590683 ANKLE2Q86XL3 938 aa14.79□□□□□ -0.04
AP3D1-208ENST00000590683 CDC42BPAQ5VT25 1732 aa14.78□□□□□ -0.04
AP3D1-208ENST00000590683 MED14O60244 1454 aa14.78□□□□□ -0.04
AP3D1-208ENST00000590683 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
AP3D1-208ENST00000590683 CLIP1P30622 1438 aa14.75□□□□□ -0.05
AP3D1-208ENST00000590683 FBXO31Q5XUX0 539 aaPredicted RBP14.75□□□□□ -0.05
AP3D1-208ENST00000590683 ATP7AQ04656 1500 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms