RNA–Protein interactions for RNA: ENST00000590570.1

HKR1-217, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 4

Gene HKR1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-217ENST00000590570 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
HKR1-217ENST00000590570 KIF13AQ9H1H9 1805 aa12.15□□□□□ -0.46
HKR1-217ENST00000590570 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.47
HKR1-217ENST00000590570 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
HKR1-217ENST00000590570 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
HKR1-217ENST00000590570 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
HKR1-217ENST00000590570 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
HKR1-217ENST00000590570 ST18O60284 1047 aa12.1□□□□□ -0.47
HKR1-217ENST00000590570 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
HKR1-217ENST00000590570 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
HKR1-217ENST00000590570 SNAPC4Q5SXM2 1469 aa12.09□□□□□ -0.47
HKR1-217ENST00000590570 HECW2Q9P2P5 1572 aa12.09□□□□□ -0.47
HKR1-217ENST00000590570 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
HKR1-217ENST00000590570 FBXO41Q8TF61 875 aa12.06□□□□□ -0.48
HKR1-217ENST00000590570 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
HKR1-217ENST00000590570 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
HKR1-217ENST00000590570 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
HKR1-217ENST00000590570 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
HKR1-217ENST00000590570 PLCG2P16885 1265 aa12.04□□□□□ -0.48
HKR1-217ENST00000590570 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
HKR1-217ENST00000590570 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
HKR1-217ENST00000590570 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
HKR1-217ENST00000590570 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
HKR1-217ENST00000590570 TDRD9Q8NDG6 1382 aaKnown RBP12.03□□□□□ -0.48
HKR1-217ENST00000590570 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
HKR1-217ENST00000590570 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
HKR1-217ENST00000590570 NUBP1P53384 320 aa12.01□□□□□ -0.49
HKR1-217ENST00000590570 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
HKR1-217ENST00000590570 ABCC8Q09428 1581 aa12□□□□□ -0.49
HKR1-217ENST00000590570 ANP32EQ9BTT0 268 aa11.99□□□□□ -0.49
HKR1-217ENST00000590570 KDM6BO15054 1643 aa11.99□□□□□ -0.49
HKR1-217ENST00000590570 ADGRL1O94910 1474 aa11.97□□□□□ -0.49
HKR1-217ENST00000590570 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
HKR1-217ENST00000590570 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
HKR1-217ENST00000590570 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
HKR1-217ENST00000590570 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
HKR1-217ENST00000590570 SYNJ2O15056 1496 aa11.96□□□□□ -0.49
HKR1-217ENST00000590570 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
HKR1-217ENST00000590570 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.5
HKR1-217ENST00000590570 SOCS7O14512 581 aa11.95□□□□□ -0.5
HKR1-217ENST00000590570 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
HKR1-217ENST00000590570 ILDR2Q71H61 639 aa11.95□□□□□ -0.5
HKR1-217ENST00000590570 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
HKR1-217ENST00000590570 ABCC10Q5T3U5 1492 aa11.92□□□□□ -0.5
HKR1-217ENST00000590570 SNPHO15079 494 aa11.92□□□□□ -0.5
HKR1-217ENST00000590570 SPNS2Q8IVW8 549 aa11.92□□□□□ -0.5
HKR1-217ENST00000590570 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
HKR1-217ENST00000590570 SOGA1O94964 1423 aa11.9□□□□□ -0.5
HKR1-217ENST00000590570 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
HKR1-217ENST00000590570 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
HKR1-217ENST00000590570 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
HKR1-217ENST00000590570 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
HKR1-217ENST00000590570 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
HKR1-217ENST00000590570 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
HKR1-217ENST00000590570 WDR97A6NE52 1622 aa11.88□□□□□ -0.51
HKR1-217ENST00000590570 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
HKR1-217ENST00000590570 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
HKR1-217ENST00000590570 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
HKR1-217ENST00000590570 PBRM1Q86U86 1689 aa11.83□□□□□ -0.52
HKR1-217ENST00000590570 FGD5Q6ZNL6 1462 aa11.82□□□□□ -0.52
HKR1-217ENST00000590570 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
HKR1-217ENST00000590570 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
HKR1-217ENST00000590570 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
HKR1-217ENST00000590570 PYGBP11216 843 aa11.79□□□□□ -0.52
HKR1-217ENST00000590570 VASPP50552 380 aaPredicted RBP11.78□□□□□ -0.52
HKR1-217ENST00000590570 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
HKR1-217ENST00000590570 DIEXFQ68CQ4 756 aaKnown RBP11.77□□□□□ -0.53
HKR1-217ENST00000590570 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
HKR1-217ENST00000590570 NUP160Q12769 1436 aa11.76□□□□□ -0.53
HKR1-217ENST00000590570 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
HKR1-217ENST00000590570 EMP3P54852 163 aa11.73□□□□□ -0.53
HKR1-217ENST00000590570 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
HKR1-217ENST00000590570 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
HKR1-217ENST00000590570 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
HKR1-217ENST00000590570 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
HKR1-217ENST00000590570 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
HKR1-217ENST00000590570 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
HKR1-217ENST00000590570 CUX1P39880 1505 aa11.7□□□□□ -0.54
HKR1-217ENST00000590570 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
HKR1-217ENST00000590570 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
HKR1-217ENST00000590570 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
HKR1-217ENST00000590570 SUPT5HO00267 1087 aaKnown RBP11.68□□□□□ -0.54
HKR1-217ENST00000590570 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
HKR1-217ENST00000590570 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
HKR1-217ENST00000590570 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
HKR1-217ENST00000590570 MKRN3Q13064 507 aaKnown RBP11.66□□□□□ -0.54
HKR1-217ENST00000590570 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
HKR1-217ENST00000590570 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
HKR1-217ENST00000590570 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
HKR1-217ENST00000590570 SPATA31D1Q6ZQQ2 1576 aa11.65□□□□□ -0.54
HKR1-217ENST00000590570 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
HKR1-217ENST00000590570 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
HKR1-217ENST00000590570 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
HKR1-217ENST00000590570 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
HKR1-217ENST00000590570 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
HKR1-217ENST00000590570 ERICH6BQ5W0A0 696 aa11.61□□□□□ -0.55
HKR1-217ENST00000590570 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
HKR1-217ENST00000590570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■□□□□ 8.4
HKR1-217ENST00000590570 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
HKR1-217ENST00000590570 GSE1Q14687 1217 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms