RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 SNAPC4Q5SXM2 1469 aa4.97□□□□□ -1.61
LINC01539-203ENST00000589447 CLCN6P51797 869 aa4.97□□□□□ -1.61
LINC01539-203ENST00000589447 BIVM-ERCC5R4GMW8 1640 aa4.97□□□□□ -1.61
LINC01539-203ENST00000589447 EEA1Q15075 1411 aa4.97□□□□□ -1.61
LINC01539-203ENST00000589447 SHROOM2Q13796 1616 aa4.96□□□□□ -1.62
LINC01539-203ENST00000589447 CEP170Q5SW79 1584 aa4.95□□□□□ -1.62
LINC01539-203ENST00000589447 ZNF316A6NFI3 1004 aaPredicted RBP4.95□□□□□ -1.62
LINC01539-203ENST00000589447 NPM1P06748 294 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC01539-203ENST00000589447 FARP1Q9Y4F1 1045 aaPredicted RBP4.95□□□□□ -1.62
LINC01539-203ENST00000589447 CHADLQ6NUI6 762 aa4.94□□□□□ -1.62
LINC01539-203ENST00000589447 IFNLR1Q8IU57 520 aaPredicted RBP4.94□□□□□ -1.62
LINC01539-203ENST00000589447 CEP162Q5TB80 1403 aa4.94□□□□□ -1.62
LINC01539-203ENST00000589447 ABCC8Q09428 1581 aa4.94□□□□□ -1.62
LINC01539-203ENST00000589447 TNIKQ9UKE5 1360 aa4.93□□□□□ -1.62
LINC01539-203ENST00000589447 RUSC2Q8N2Y8 1516 aa4.92□□□□□ -1.62
LINC01539-203ENST00000589447 CREBZFQ9NS37 354 aa4.92□□□□□ -1.62
LINC01539-203ENST00000589447 GOLGA3Q08378 1498 aa4.92□□□□□ -1.62
LINC01539-203ENST00000589447 TOP2BQ02880 1626 aa4.91□□□□□ -1.62
LINC01539-203ENST00000589447 CD44P16070 742 aaKnown RBP4.91□□□□□ -1.62
LINC01539-203ENST00000589447 MAGI1Q96QZ7 1491 aaPredicted RBP4.91□□□□□ -1.62
LINC01539-203ENST00000589447 TDRD9Q8NDG6 1382 aaKnown RBP4.91□□□□□ -1.62
LINC01539-203ENST00000589447 KIF21BO75037 1637 aa4.9□□□□□ -1.62
LINC01539-203ENST00000589447 SYNJ2O15056 1496 aa4.89□□□□□ -1.63
LINC01539-203ENST00000589447 ABCA10Q8WWZ4 1543 aa4.89□□□□□ -1.63
LINC01539-203ENST00000589447 PAK3O75914 559 aaPredicted RBP4.89□□□□□ -1.63
LINC01539-203ENST00000589447 PLEKHG5O94827 1062 aa4.89□□□□□ -1.63
LINC01539-203ENST00000589447 ZNF579Q8NAF0 562 aaKnown RBP4.89□□□□□ -1.63
LINC01539-203ENST00000589447 ADCY10Q96PN6 1610 aa4.88□□□□□ -1.63
LINC01539-203ENST00000589447 UBTFP17480 764 aaKnown RBP4.88□□□□□ -1.63
LINC01539-203ENST00000589447 EVX2Q03828 476 aa4.88□□□□□ -1.63
LINC01539-203ENST00000589447 YTHDC1Q96MU7 727 aaKnown RBP4.88□□□□□ -1.63
LINC01539-203ENST00000589447 PPRC1Q5VV67 1664 aaKnown RBP4.88□□□□□ -1.63
LINC01539-203ENST00000589447 TSPOAP1O95153 1857 aa4.88□□□□□ -1.63
LINC01539-203ENST00000589447 GRIN2AQ12879 1464 aa4.88□□□□□ -1.63
LINC01539-203ENST00000589447 GRIN2BQ13224 1484 aa4.88□□□□□ -1.63
LINC01539-203ENST00000589447 ECM2O94769 699 aaPredicted RBP4.87□□□□□ -1.63
LINC01539-203ENST00000589447 SOGA1O94964 1423 aa4.87□□□□□ -1.63
LINC01539-203ENST00000589447 GAPVD1Q14C86 1478 aa4.87□□□□□ -1.63
LINC01539-203ENST00000589447 MNX1P50219 401 aaPredicted RBP4.86□□□□□ -1.63
LINC01539-203ENST00000589447 ZBTB47Q9UFB7 747 aaPredicted RBP4.85□□□□□ -1.63
LINC01539-203ENST00000589447 NUP160Q12769 1436 aa4.85□□□□□ -1.63
LINC01539-203ENST00000589447 DIP2BQ9P265 1576 aa4.85□□□□□ -1.63
LINC01539-203ENST00000589447 CUL7Q14999 1698 aa4.84□□□□□ -1.63
LINC01539-203ENST00000589447 GABBR2O75899 941 aa4.84□□□□□ -1.63
LINC01539-203ENST00000589447 PLSCR2Q9NRY7 297 aa4.84□□□□□ -1.63
LINC01539-203ENST00000589447 VPS8Q8N3P4 1428 aa4.83□□□□□ -1.64
LINC01539-203ENST00000589447 CYB5RLQ6IPT4 315 aa4.83□□□□□ -1.64
LINC01539-203ENST00000589447 MIER1Q8N108 512 aa4.83□□□□□ -1.64
LINC01539-203ENST00000589447 ERICH3Q5RHP9 1530 aa4.82□□□□□ -1.64
LINC01539-203ENST00000589447 ANP32EQ9BTT0 268 aa4.82□□□□□ -1.64
LINC01539-203ENST00000589447 ZRANB1Q9UGI0 708 aa4.82□□□□□ -1.64
LINC01539-203ENST00000589447 CCDC9Q9Y3X0 531 aaKnown RBP4.82□□□□□ -1.64
LINC01539-203ENST00000589447 CLIP1P30622 1438 aa4.81□□□□□ -1.64
LINC01539-203ENST00000589447 CTTNBP2Q8WZ74 1663 aa4.81□□□□□ -1.64
LINC01539-203ENST00000589447 BRPF1P55201 1214 aaPredicted RBP4.81□□□□□ -1.64
LINC01539-203ENST00000589447 SPOCK2Q92563 424 aa4.81□□□□□ -1.64
LINC01539-203ENST00000589447 SUPT16HQ9Y5B9 1047 aaKnown RBP4.8□□□□□ -1.64
LINC01539-203ENST00000589447 ABCC2Q92887 1545 aa4.79□□□□□ -1.64
LINC01539-203ENST00000589447 RGL2O15211 777 aa4.79□□□□□ -1.64
LINC01539-203ENST00000589447 MAPKBP1O60336 1514 aa4.78□□□□□ -1.64
LINC01539-203ENST00000589447 PLCD3Q8N3E9 789 aa4.78□□□□□ -1.64
LINC01539-203ENST00000589447 ZMYND15Q9H091 742 aa4.78□□□□□ -1.64
LINC01539-203ENST00000589447 RSPH6AQ9H0K4 717 aa4.78□□□□□ -1.64
LINC01539-203ENST00000589447 KDM6BO15054 1643 aa4.77□□□□□ -1.65
LINC01539-203ENST00000589447 ZCCHC11Q5TAX3 1644 aaKnown RBP4.77□□□□□ -1.65
LINC01539-203ENST00000589447 MAP3K4Q9Y6R4 1608 aa4.77□□□□□ -1.65
LINC01539-203ENST00000589447 ZBTB7CA1YPR0 619 aa4.77□□□□□ -1.65
LINC01539-203ENST00000589447 LHX8Q68G74 356 aa4.77□□□□□ -1.65
LINC01539-203ENST00000589447 FHAD1B1AJZ9 1412 aa4.77□□□□□ -1.65
LINC01539-203ENST00000589447 DHX57Q6P158 1386 aaKnown RBP4.77□□□□□ -1.65
LINC01539-203ENST00000589447 CHGAP10645 457 aaKnown RBP4.76□□□□□ -1.65
LINC01539-203ENST00000589447 DCBLD2Q96PD2 775 aa4.76□□□□□ -1.65
LINC01539-203ENST00000589447 IQGAP2Q13576 1575 aa4.75□□□□□ -1.65
LINC01539-203ENST00000589447 PRG4Q92954 1404 aaPredicted RBP4.75□□□□□ -1.65
LINC01539-203ENST00000589447 CCDC61Q9Y6R9 512 aa4.75□□□□□ -1.65
LINC01539-203ENST00000589447 KIAA0556O60303 1618 aa4.75□□□□□ -1.65
LINC01539-203ENST00000589447 RRBP1Q9P2E9 1410 aaKnown RBP4.74□□□□□ -1.65
LINC01539-203ENST00000589447 NEFLP07196 543 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 HMGB1P09429 215 aaKnown RBP4.74□□□□□ -1.65
LINC01539-203ENST00000589447 P3H3Q8IVL6 736 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 HS6ST3Q8IZP7 471 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 CHMP7Q8WUX9 453 aaPredicted RBP4.74□□□□□ -1.65
LINC01539-203ENST00000589447 FAM212AQ96EL1 285 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 PHF12Q96QT6 1004 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 SGIP1Q9BQI5 828 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 BCL11AQ9H165 835 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 SIGLEC1Q9BZZ2 1709 aa4.74□□□□□ -1.65
LINC01539-203ENST00000589447 GALR2O43603 387 aaPredicted RBP4.73□□□□□ -1.65
LINC01539-203ENST00000589447 EIF5BO60841 1220 aaKnown RBP4.73□□□□□ -1.65
LINC01539-203ENST00000589447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.73□□□□□ -1.65
LINC01539-203ENST00000589447 ABCC10Q5T3U5 1492 aa4.73□□□□□ -1.65
LINC01539-203ENST00000589447 RAPGEF2Q9Y4G8 1499 aa4.73□□□□□ -1.65
LINC01539-203ENST00000589447 DISP1Q96F81 1524 aa4.72□□□□□ -1.65
LINC01539-203ENST00000589447 PDIA4P13667 645 aaKnown RBP4.72□□□□□ -1.65
LINC01539-203ENST00000589447 LMOD2Q6P5Q4 547 aa4.72□□□□□ -1.65
LINC01539-203ENST00000589447 RASEFQ8IZ41 740 aa4.72□□□□□ -1.65
LINC01539-203ENST00000589447 MYT1LQ9UL68 1186 aa4.72□□□□□ -1.65
LINC01539-203ENST00000589447 CFAP43Q8NDM7 1665 aa4.71□□□□□ -1.66
LINC01539-203ENST00000589447 POTEIP0CG38 1075 aa4.71□□□□□ -1.66
LINC01539-203ENST00000589447 NUBP1P53384 320 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms