RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 POTEJP0CG39 1038 aa10.26□□□□□ -0.77
CHUK-203ENST00000588656 IER5LQ5T953 404 aa10.25□□□□□ -0.77
CHUK-203ENST00000588656 SCUBE2Q9NQ36 999 aa10.25□□□□□ -0.77
CHUK-203ENST00000588656 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
CHUK-203ENST00000588656 PYGBP11216 843 aa10.23□□□□□ -0.77
CHUK-203ENST00000588656 GSE1Q14687 1217 aa10.23□□□□□ -0.77
CHUK-203ENST00000588656 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
CHUK-203ENST00000588656 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
CHUK-203ENST00000588656 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
CHUK-203ENST00000588656 TMEM106CQ9BVX2 250 aa10.22□□□□□ -0.77
CHUK-203ENST00000588656 GRIN2BQ13224 1484 aa10.22□□□□□ -0.77
CHUK-203ENST00000588656 MAGI1Q96QZ7 1491 aaPredicted RBP10.22□□□□□ -0.77
CHUK-203ENST00000588656 ABCA5Q8WWZ7 1642 aa10.21□□□□□ -0.78
CHUK-203ENST00000588656 SYNJ2O15056 1496 aa10.2□□□□□ -0.78
CHUK-203ENST00000588656 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
CHUK-203ENST00000588656 GAPVD1Q14C86 1478 aa10.18□□□□□ -0.78
CHUK-203ENST00000588656 SUPT5HO00267 1087 aaKnown RBP10.16□□□□□ -0.78
CHUK-203ENST00000588656 CEP170Q5SW79 1584 aa10.16□□□□□ -0.78
CHUK-203ENST00000588656 CHRM1P11229 460 aaPredicted RBP10.15□□□□□ -0.78
CHUK-203ENST00000588656 PCDHB8Q9UN66 801 aa10.15□□□□□ -0.78
CHUK-203ENST00000588656 ADAMTS12P58397 1594 aa10.14□□□□□ -0.79
CHUK-203ENST00000588656 KIF13AQ9H1H9 1805 aa10.14□□□□□ -0.79
CHUK-203ENST00000588656 ZNF467Q7Z7K2 595 aaPredicted RBP10.13□□□□□ -0.79
CHUK-203ENST00000588656 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
CHUK-203ENST00000588656 PLCG2P16885 1265 aa10.12□□□□□ -0.79
CHUK-203ENST00000588656 SPOCK2Q92563 424 aa10.12□□□□□ -0.79
CHUK-203ENST00000588656 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
CHUK-203ENST00000588656 GRIN2AQ12879 1464 aa10.11□□□□□ -0.79
CHUK-203ENST00000588656 IFNLR1Q8IU57 520 aaPredicted RBP10.11□□□□□ -0.79
CHUK-203ENST00000588656 POTEMA6NI47 508 aa10.09□□□□□ -0.79
CHUK-203ENST00000588656 IRX5P78411 483 aaPredicted RBP10.09□□□□□ -0.79
CHUK-203ENST00000588656 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
CHUK-203ENST00000588656 TOP2BQ02880 1626 aa10.08□□□□□ -0.8
CHUK-203ENST00000588656 SHROOM2Q13796 1616 aa10.08□□□□□ -0.8
CHUK-203ENST00000588656 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
CHUK-203ENST00000588656 POTEGQ6S5H5 508 aa10.07□□□□□ -0.8
CHUK-203ENST00000588656 TSPOAP1O95153 1857 aa10.06□□□□□ -0.8
CHUK-203ENST00000588656 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
CHUK-203ENST00000588656 GOLGA2Q08379 1002 aa10.04□□□□□ -0.8
CHUK-203ENST00000588656 NUP160Q12769 1436 aa10.04□□□□□ -0.8
CHUK-203ENST00000588656 WRNQ14191 1432 aaPredicted RBP eCLIP10.04□□□□□ -0.8
CHUK-203ENST00000588656 PCDH10Q9P2E7 1040 aa10.03□□□□□ -0.8
CHUK-203ENST00000588656 PSEN1P49768 467 aa10.02□□□□□ -0.81
CHUK-203ENST00000588656 MKRN3Q13064 507 aaKnown RBP10.02□□□□□ -0.81
CHUK-203ENST00000588656 RUSC2Q8N2Y8 1516 aa10.02□□□□□ -0.81
CHUK-203ENST00000588656 FHAD1B1AJZ9 1412 aa10.01□□□□□ -0.81
CHUK-203ENST00000588656 SLAIN1Q8ND83 568 aa10.01□□□□□ -0.81
CHUK-203ENST00000588656 PRG4Q92954 1404 aaPredicted RBP10□□□□□ -0.81
CHUK-203ENST00000588656 ERICH3Q5RHP9 1530 aa9.99□□□□□ -0.81
CHUK-203ENST00000588656 PLSCR2Q9NRY7 297 aa9.99□□□□□ -0.81
CHUK-203ENST00000588656 ADCY10Q96PN6 1610 aa9.98□□□□□ -0.81
CHUK-203ENST00000588656 PDAP1Q13442 181 aaKnown RBP9.98□□□□□ -0.81
CHUK-203ENST00000588656 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
CHUK-203ENST00000588656 TTBK1Q5TCY1 1321 aaPredicted RBP9.97□□□□□ -0.81
CHUK-203ENST00000588656 L3MBTL3Q96JM7 780 aaPredicted RBP9.95□□□□□ -0.82
CHUK-203ENST00000588656 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.95□□□□□ -0.82
CHUK-203ENST00000588656 DIP2BQ9P265 1576 aa9.95□□□□□ -0.82
CHUK-203ENST00000588656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHUK-203ENST00000588656 JPH4Q96JJ6 628 aa9.93□□□□□ -0.82
CHUK-203ENST00000588656 FAM69CQ0P6D2 419 aa9.92□□□□□ -0.82
CHUK-203ENST00000588656 PDCD7Q8N8D1 485 aaKnown RBP9.92□□□□□ -0.82
CHUK-203ENST00000588656 KDM6BO15054 1643 aa9.92□□□□□ -0.82
CHUK-203ENST00000588656 CUL7Q14999 1698 aa9.9□□□□□ -0.82
CHUK-203ENST00000588656 SNPHO15079 494 aa9.9□□□□□ -0.82
CHUK-203ENST00000588656 ABCC10Q5T3U5 1492 aa9.89□□□□□ -0.83
CHUK-203ENST00000588656 MAPKBP1O60336 1514 aa9.88□□□□□ -0.83
CHUK-203ENST00000588656 C3orf67Q6ZVT6 689 aa9.88□□□□□ -0.83
CHUK-203ENST00000588656 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
CHUK-203ENST00000588656 ILDR1Q86SU0 546 aaPredicted RBP9.87□□□□□ -0.83
CHUK-203ENST00000588656 PPRC1Q5VV67 1664 aaKnown RBP9.87□□□□□ -0.83
CHUK-203ENST00000588656 ST18O60284 1047 aa9.86□□□□□ -0.83
CHUK-203ENST00000588656 KIAA0586Q9BVV6 1533 aa9.83□□□□□ -0.84
CHUK-203ENST00000588656 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
CHUK-203ENST00000588656 G3V3G9 751 aa9.82□□□□□ -0.84
CHUK-203ENST00000588656 TMEM121BQ9BXQ6 578 aaPredicted RBP9.82□□□□□ -0.84
CHUK-203ENST00000588656 IGF1RP08069 1367 aa9.82□□□□□ -0.84
CHUK-203ENST00000588656 KIF27Q86VH2 1401 aa9.82□□□□□ -0.84
CHUK-203ENST00000588656 IQGAP2Q13576 1575 aa9.8□□□□□ -0.84
CHUK-203ENST00000588656 ABCC2Q92887 1545 aa9.8□□□□□ -0.84
CHUK-203ENST00000588656 ZCCHC11Q5TAX3 1644 aaKnown RBP9.79□□□□□ -0.84
CHUK-203ENST00000588656 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
CHUK-203ENST00000588656 DPY19L2Q6NUT2 758 aa9.79□□□□□ -0.84
CHUK-203ENST00000588656 CDAN1Q8IWY9 1227 aa9.79□□□□□ -0.84
CHUK-203ENST00000588656 PTPRGP23470 1445 aa9.79□□□□□ -0.84
CHUK-203ENST00000588656 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
CHUK-203ENST00000588656 ASXL2Q76L83 1435 aa9.78□□□□□ -0.84
CHUK-203ENST00000588656 CARMIL1Q5VZK9 1371 aa9.77□□□□□ -0.84
CHUK-203ENST00000588656 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.85
CHUK-203ENST00000588656 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
CHUK-203ENST00000588656 MAP3K4Q9Y6R4 1608 aa9.75□□□□□ -0.85
CHUK-203ENST00000588656 ADGRL1O94910 1474 aa9.75□□□□□ -0.85
CHUK-203ENST00000588656 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
CHUK-203ENST00000588656 DISP1Q96F81 1524 aa9.75□□□□□ -0.85
CHUK-203ENST00000588656 TNIKQ9UKE5 1360 aa9.75□□□□□ -0.85
CHUK-203ENST00000588656 TAOK2Q9UL54 1235 aa9.74□□□□□ -0.85
CHUK-203ENST00000588656 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
CHUK-203ENST00000588656 CARMIL2Q6F5E8 1435 aa9.73□□□□□ -0.85
CHUK-203ENST00000588656 SOX12O15370 315 aa9.73□□□□□ -0.85
CHUK-203ENST00000588656 COL17A1Q9UMD9 1497 aaPredicted RBP9.72□□□□□ -0.85
CHUK-203ENST00000588656 GLI2P10070 1586 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms