RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
PRKCSH-205ENST00000587327 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
PRKCSH-205ENST00000587327 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
PRKCSH-205ENST00000587327 KDM6BO15054 1643 aa23.66■■□□□ 1.38
PRKCSH-205ENST00000587327 ADCY10Q96PN6 1610 aa23.66■■□□□ 1.38
PRKCSH-205ENST00000587327 ABCA8O94911 1581 aa23.66■■□□□ 1.38
PRKCSH-205ENST00000587327 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
PRKCSH-205ENST00000587327 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
PRKCSH-205ENST00000587327 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
PRKCSH-205ENST00000587327 BCANQ96GW7 911 aa23.64■■□□□ 1.38
PRKCSH-205ENST00000587327 KIF14Q15058 1648 aa23.64■■□□□ 1.37
PRKCSH-205ENST00000587327 DAPK1P53355 1430 aa23.63■■□□□ 1.37
PRKCSH-205ENST00000587327 CHD1O14646 1710 aa23.61■■□□□ 1.37
PRKCSH-205ENST00000587327 DENND4BO75064 1496 aaPredicted RBP23.61■■□□□ 1.37
PRKCSH-205ENST00000587327 ITSN2Q9NZM3 1697 aa23.61■■□□□ 1.37
PRKCSH-205ENST00000587327 ABCC5O15440 1437 aa23.6■■□□□ 1.37
PRKCSH-205ENST00000587327 NEFLP07196 543 aa23.6■■□□□ 1.37
PRKCSH-205ENST00000587327 ZNF644Q9H582 1327 aaPredicted RBP23.58■■□□□ 1.37
PRKCSH-205ENST00000587327 ROCK1Q13464 1354 aa23.57■■□□□ 1.36
PRKCSH-205ENST00000587327 GPATCH8Q9UKJ3 1502 aaKnown RBP23.56■■□□□ 1.36
PRKCSH-205ENST00000587327 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
PRKCSH-205ENST00000587327 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
PRKCSH-205ENST00000587327 HSPA5P11021 654 aaKnown RBP23.53■■□□□ 1.36
PRKCSH-205ENST00000587327 WASHC2AQ641Q2 1341 aa23.53■■□□□ 1.36
PRKCSH-205ENST00000587327 ATP10BO94823 1461 aa23.53■■□□□ 1.36
PRKCSH-205ENST00000587327 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
PRKCSH-205ENST00000587327 EIF4G2P78344 907 aaKnown RBP eCLIP23.49■■□□□ 1.35
PRKCSH-205ENST00000587327 CROCC2H7BZ55 1655 aa23.48■■□□□ 1.35
PRKCSH-205ENST00000587327 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
PRKCSH-205ENST00000587327 CFDP1Q9UEE9 299 aaPredicted RBP23.48■■□□□ 1.35
PRKCSH-205ENST00000587327 CDC42BPAQ5VT25 1732 aa23.48■■□□□ 1.35
PRKCSH-205ENST00000587327 ADGBQ8N7X0 1667 aa23.47■■□□□ 1.35
PRKCSH-205ENST00000587327 PTPRGP23470 1445 aa23.46■■□□□ 1.35
PRKCSH-205ENST00000587327 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.35
PRKCSH-205ENST00000587327 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
PRKCSH-205ENST00000587327 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
PRKCSH-205ENST00000587327 ADGRL2O95490 1459 aa23.41■■□□□ 1.34
PRKCSH-205ENST00000587327 FOXD1Q16676 465 aa23.41■■□□□ 1.34
PRKCSH-205ENST00000587327 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
PRKCSH-205ENST00000587327 NCOA1Q15788 1441 aa23.39■■□□□ 1.33
PRKCSH-205ENST00000587327 CNTLNQ9NXG0 1405 aa23.39■■□□□ 1.33
PRKCSH-205ENST00000587327 RPRD2Q5VT52 1461 aaKnown RBP23.38■■□□□ 1.33
PRKCSH-205ENST00000587327 ZNF777Q9ULD5 760 aaPredicted RBP23.37■■□□□ 1.33
PRKCSH-205ENST00000587327 ERCC6L2Q5T890 1561 aa23.37■■□□□ 1.33
PRKCSH-205ENST00000587327 ANP32EQ9BTT0 268 aa23.34■■□□□ 1.33
PRKCSH-205ENST00000587327 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
PRKCSH-205ENST00000587327 CCDC7Q96M83 1385 aa23.34■■□□□ 1.33
PRKCSH-205ENST00000587327 SHANK2Q9UPX8 1470 aa23.33■■□□□ 1.33
PRKCSH-205ENST00000587327 RBM19Q9Y4C8 960 aaKnown RBP23.32■■□□□ 1.32
PRKCSH-205ENST00000587327 PZPP20742 1482 aa23.31■■□□□ 1.32
PRKCSH-205ENST00000587327 TEX14Q8IWB6 1497 aa23.31■■□□□ 1.32
PRKCSH-205ENST00000587327 NBPF8Q3BBV2 869 aa23.31■■□□□ 1.32
PRKCSH-205ENST00000587327 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
PRKCSH-205ENST00000587327 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
PRKCSH-205ENST00000587327 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
PRKCSH-205ENST00000587327 PRKRIP1Q9H875 184 aaPredicted RBP23.29■■□□□ 1.32
PRKCSH-205ENST00000587327 ANKRD30AQ9BXX3 1397 aa23.29■■□□□ 1.32
PRKCSH-205ENST00000587327 ABCC2Q92887 1545 aa23.28■■□□□ 1.32
PRKCSH-205ENST00000587327 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
PRKCSH-205ENST00000587327 CDC42BPBQ9Y5S2 1711 aa23.27■■□□□ 1.32
PRKCSH-205ENST00000587327 C9orf84Q5VXU9 1444 aa23.27■■□□□ 1.32
PRKCSH-205ENST00000587327 SPATA31E1Q6ZUB1 1445 aa23.27■■□□□ 1.32
PRKCSH-205ENST00000587327 ARHGEF5Q12774 1597 aa23.26■■□□□ 1.31
PRKCSH-205ENST00000587327 SAMD9LQ8IVG5 1584 aa23.25■■□□□ 1.31
PRKCSH-205ENST00000587327 ANKRD50Q9ULJ7 1429 aa23.23■■□□□ 1.31
PRKCSH-205ENST00000587327 TTC37Q6PGP7 1564 aa23.23■■□□□ 1.31
PRKCSH-205ENST00000587327 MBD5Q9P267 1494 aa23.23■■□□□ 1.31
PRKCSH-205ENST00000587327 KIF7Q2M1P5 1343 aa23.21■■□□□ 1.31
PRKCSH-205ENST00000587327 ERICH6BQ5W0A0 696 aa23.2■■□□□ 1.3
PRKCSH-205ENST00000587327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.19■■□□□ 1.32e-23■□□□□ 8.5
PRKCSH-205ENST00000587327 IRX6P78412 446 aaPredicted RBP23.18■■□□□ 1.3
PRKCSH-205ENST00000587327 MRS2Q9HD23 443 aa23.18■■□□□ 1.3
PRKCSH-205ENST00000587327 POLR1AO95602 1720 aaPredicted RBP23.18■■□□□ 1.3
PRKCSH-205ENST00000587327 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
PRKCSH-205ENST00000587327 KIAA1107Q9UPP5 1409 aa23.17■■□□□ 1.3
PRKCSH-205ENST00000587327 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
PRKCSH-205ENST00000587327 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
PRKCSH-205ENST00000587327 ZBED9Q6R2W3 1325 aa23.14■■□□□ 1.3
PRKCSH-205ENST00000587327 KDM5DQ9BY66 1539 aa23.14■■□□□ 1.3
PRKCSH-205ENST00000587327 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.29
PRKCSH-205ENST00000587327 KIF15Q9NS87 1388 aa23.13■■□□□ 1.29
PRKCSH-205ENST00000587327 MYO5CQ9NQX4 1742 aa23.13■■□□□ 1.29
PRKCSH-205ENST00000587327 SYCP2Q9BX26 1530 aa23.13■■□□□ 1.29
PRKCSH-205ENST00000587327 ARHGAP5Q13017 1502 aa23.12■■□□□ 1.29
PRKCSH-205ENST00000587327 UHRF1BP1LA0JNW5 1464 aa23.12■■□□□ 1.29
PRKCSH-205ENST00000587327 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
PRKCSH-205ENST00000587327 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
PRKCSH-205ENST00000587327 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
PRKCSH-205ENST00000587327 PKD2Q13563 968 aa23.08■■□□□ 1.29
PRKCSH-205ENST00000587327 MAST1Q9Y2H9 1570 aa23.08■■□□□ 1.29
PRKCSH-205ENST00000587327 NUP155O75694 1391 aa23.07■■□□□ 1.28
PRKCSH-205ENST00000587327 USP47Q96K76 1375 aa23.04■■□□□ 1.28
PRKCSH-205ENST00000587327 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
PRKCSH-205ENST00000587327 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
PRKCSH-205ENST00000587327 PLEKHH2Q8IVE3 1493 aa23.02■■□□□ 1.27
PRKCSH-205ENST00000587327 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
PRKCSH-205ENST00000587327 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
PRKCSH-205ENST00000587327 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
PRKCSH-205ENST00000587327 BCORL1Q5H9F3 1711 aa23■■□□□ 1.27
PRKCSH-205ENST00000587327 ZNF326Q5BKZ1 582 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms