RNA–Protein interactions for RNA: ENST00000586944.5

PTBP1-210, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 4,661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-210ENST00000586944 FTSJ3Q8IY81 847 aaKnown RBP22.62■■□□□ 1.21
PTBP1-210ENST00000586944 KANK1Q14678 1352 aa22.62■■□□□ 1.21
PTBP1-210ENST00000586944 MYH16Q9H6N6 1097 aa22.62■■□□□ 1.21
PTBP1-210ENST00000586944 EIF5BO60841 1220 aaKnown RBP22.61■■□□□ 1.21
PTBP1-210ENST00000586944 KTN1Q86UP2 1357 aaKnown RBP22.61■■□□□ 1.21
PTBP1-210ENST00000586944 DDRGK1Q96HY6 314 aa22.6■■□□□ 1.21
PTBP1-210ENST00000586944 MAPK8IP3Q9UPT6 1336 aa22.6■■□□□ 1.21
PTBP1-210ENST00000586944 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
PTBP1-210ENST00000586944 ST20-MTHFSA0A0A6YYL1 179 aa22.58■■□□□ 1.2
PTBP1-210ENST00000586944 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
PTBP1-210ENST00000586944 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
PTBP1-210ENST00000586944 MLECQ14165 292 aa22.56■■□□□ 1.2
PTBP1-210ENST00000586944 KIF3BO15066 747 aa22.55■■□□□ 1.2
PTBP1-210ENST00000586944 NOP58Q9Y2X3 529 aaKnown RBP22.55■■□□□ 1.2
PTBP1-210ENST00000586944 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
PTBP1-210ENST00000586944 RALBP1Q15311 655 aa22.54■■□□□ 1.2
PTBP1-210ENST00000586944 STK26Q9P289 416 aa22.54■■□□□ 1.2
PTBP1-210ENST00000586944 SRPK2P78362 688 aaKnown RBP22.54■■□□□ 1.2
PTBP1-210ENST00000586944 ANP32BQ92688 251 aaKnown RBP22.54■■□□□ 1.2
PTBP1-210ENST00000586944 RCAN3Q9UKA8 241 aa22.54■■□□□ 1.2
PTBP1-210ENST00000586944 LRRC9Q6ZRR7 1453 aa22.53■■□□□ 1.2
PTBP1-210ENST00000586944 FGD6Q6ZV73 1430 aa22.53■■□□□ 1.2
PTBP1-210ENST00000586944 BECN1Q14457 450 aa22.53■■□□□ 1.2
PTBP1-210ENST00000586944 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
PTBP1-210ENST00000586944 CFTRP13569 1480 aa22.48■■□□□ 1.19
PTBP1-210ENST00000586944 PRXQ9BXM0 1461 aa22.46■■□□□ 1.19
PTBP1-210ENST00000586944 SPAG9O60271 1321 aaKnown RBP22.46■■□□□ 1.19
PTBP1-210ENST00000586944 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
PTBP1-210ENST00000586944 NLRP13Q86W25 1043 aa22.46■■□□□ 1.19
PTBP1-210ENST00000586944 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.193e-8■■■■■ 33.8
PTBP1-210ENST00000586944 ERICH6BQ5W0A0 696 aa22.45■■□□□ 1.19
PTBP1-210ENST00000586944 MYOM3Q5VTT5 1437 aa22.44■■□□□ 1.18
PTBP1-210ENST00000586944 SOX12O15370 315 aa22.43■■□□□ 1.18
PTBP1-210ENST00000586944 NUTM2DQ5VT03 806 aaPredicted RBP22.42■■□□□ 1.18
PTBP1-210ENST00000586944 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
PTBP1-210ENST00000586944 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
PTBP1-210ENST00000586944 PTPRGP23470 1445 aa22.4■■□□□ 1.18
PTBP1-210ENST00000586944 USP47Q96K76 1375 aa22.39■■□□□ 1.18
PTBP1-210ENST00000586944 NESP48681 1621 aa22.39■■□□□ 1.17
PTBP1-210ENST00000586944 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
PTBP1-210ENST00000586944 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
PTBP1-210ENST00000586944 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.179e-17■■□□□ 14.4
PTBP1-210ENST00000586944 UACAQ9BZF9 1416 aa22.38■■□□□ 1.17
PTBP1-210ENST00000586944 CUX1P39880 1505 aa22.38■■□□□ 1.17
PTBP1-210ENST00000586944 PANK3Q9H999 370 aa22.38■■□□□ 1.17
PTBP1-210ENST00000586944 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
PTBP1-210ENST00000586944 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
PTBP1-210ENST00000586944 NCOA2Q15596 1464 aa22.35■■□□□ 1.17
PTBP1-210ENST00000586944 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
PTBP1-210ENST00000586944 LMOD2Q6P5Q4 547 aa22.34■■□□□ 1.17
PTBP1-210ENST00000586944 KIF15Q9NS87 1388 aa22.32■■□□□ 1.16
PTBP1-210ENST00000586944 TRAK1Q9UPV9 953 aa22.32■■□□□ 1.16
PTBP1-210ENST00000586944 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
PTBP1-210ENST00000586944 GOLGA2Q08379 1002 aa22.3■■□□□ 1.16
PTBP1-210ENST00000586944 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
PTBP1-210ENST00000586944 A0A0G2JS52 829 aa22.3■■□□□ 1.16
PTBP1-210ENST00000586944 WASHC2AQ641Q2 1341 aa22.29■■□□□ 1.16
PTBP1-210ENST00000586944 MS4A1P11836 297 aa22.29■■□□□ 1.16
PTBP1-210ENST00000586944 WASHC2CQ9Y4E1 1318 aa22.28■■□□□ 1.16
PTBP1-210ENST00000586944 ZBED9Q6R2W3 1325 aa22.27■■□□□ 1.16
PTBP1-210ENST00000586944 PNNQ9H307 717 aaKnown RBP22.27■■□□□ 1.15
PTBP1-210ENST00000586944 PLIN1O60240 522 aa22.26■■□□□ 1.15
PTBP1-210ENST00000586944 CCDC7Q96M83 1385 aa22.26■■□□□ 1.15
PTBP1-210ENST00000586944 HDGFL2Q7Z4V5 671 aaPredicted RBP22.25■■□□□ 1.15
PTBP1-210ENST00000586944 TCERG1O14776 1098 aaKnown RBP22.25■■□□□ 1.15
PTBP1-210ENST00000586944 CLUAP1Q96AJ1 413 aa22.25■■□□□ 1.15
PTBP1-210ENST00000586944 PDE3BQ13370 1112 aa22.24■■□□□ 1.15
PTBP1-210ENST00000586944 RTN4Q9NQC3 1192 aaKnown RBP22.24■■□□□ 1.15
PTBP1-210ENST00000586944 NCLP19338 710 aaKnown RBP22.24■■□□□ 1.15
PTBP1-210ENST00000586944 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
PTBP1-210ENST00000586944 SPRYD3Q8NCJ5 442 aa22.22■■□□□ 1.15
PTBP1-210ENST00000586944 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
PTBP1-210ENST00000586944 RRP7AQ9Y3A4 280 aaKnown RBP22.21■■□□□ 1.15
PTBP1-210ENST00000586944 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
PTBP1-210ENST00000586944 GOLGA6L22H0YM25 854 aa22.2■■□□□ 1.14
PTBP1-210ENST00000586944 DEKP35659 375 aaKnown RBP22.2■■□□□ 1.14
PTBP1-210ENST00000586944 EXOC6Q8TAG9 804 aa22.19■■□□□ 1.14
PTBP1-210ENST00000586944 TPRNQ4KMQ1 711 aa22.19■■□□□ 1.14
PTBP1-210ENST00000586944 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
PTBP1-210ENST00000586944 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
PTBP1-210ENST00000586944 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
PTBP1-210ENST00000586944 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
PTBP1-210ENST00000586944 HDGFP51858 240 aaKnown RBP22.17■■□□□ 1.14
PTBP1-210ENST00000586944 CASC1Q6TDU7 716 aa22.16■■□□□ 1.14
PTBP1-210ENST00000586944 CHMP4BQ9H444 224 aaKnown RBP22.16■■□□□ 1.14
PTBP1-210ENST00000586944 NBPF8Q3BBV2 869 aa22.16■■□□□ 1.14
PTBP1-210ENST00000586944 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
PTBP1-210ENST00000586944 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
PTBP1-210ENST00000586944 APBB1O00213 710 aa22.15■■□□□ 1.14
PTBP1-210ENST00000586944 TIAM1Q13009 1591 aa22.14■■□□□ 1.13
PTBP1-210ENST00000586944 HSP90AB1P08238 724 aaKnown RBP22.13■■□□□ 1.13
PTBP1-210ENST00000586944 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
PTBP1-210ENST00000586944 TRIM44Q96DX7 344 aaPredicted RBP22.13■■□□□ 1.13
PTBP1-210ENST00000586944 RRP1P56182 461 aaKnown RBP22.12■■□□□ 1.13
PTBP1-210ENST00000586944 CNTLNQ9NXG0 1405 aa22.12■■□□□ 1.13
PTBP1-210ENST00000586944 BCL2L13Q9BXK5 485 aa22.12■■□□□ 1.13
PTBP1-210ENST00000586944 HAP1P54257 671 aaPredicted RBP22.12■■□□□ 1.13
PTBP1-210ENST00000586944 IPO9Q96P70 1041 aaKnown RBP22.12■■□□□ 1.13
PTBP1-210ENST00000586944 CENPJQ9HC77 1338 aaPredicted RBP22.12■■□□□ 1.13
PTBP1-210ENST00000586944 SMC4Q9NTJ3 1288 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms