RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
PKN1-204ENST00000585839 CFAP43Q8NDM7 1665 aa25.4■■□□□ 1.66
PKN1-204ENST00000585839 GRIN2BQ13224 1484 aa25.38■■□□□ 1.65
PKN1-204ENST00000585839 TMC1Q8TDI8 760 aa25.38■■□□□ 1.65
PKN1-204ENST00000585839 EPRSP07814 1512 aaKnown RBP25.38■■□□□ 1.65
PKN1-204ENST00000585839 KIF7Q2M1P5 1343 aa25.38■■□□□ 1.65
PKN1-204ENST00000585839 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
PKN1-204ENST00000585839 CUL7Q14999 1698 aa25.34■■□□□ 1.65
PKN1-204ENST00000585839 ANP32EQ9BTT0 268 aa25.33■■□□□ 1.65
PKN1-204ENST00000585839 NUP155O75694 1391 aa25.33■■□□□ 1.64
PKN1-204ENST00000585839 MYT1Q01538 1121 aa25.32■■□□□ 1.64
PKN1-204ENST00000585839 KDM6BO15054 1643 aa25.3■■□□□ 1.64
PKN1-204ENST00000585839 CTTNBP2Q8WZ74 1663 aa25.3■■□□□ 1.64
PKN1-204ENST00000585839 CCDC7Q96M83 1385 aa25.3■■□□□ 1.64
PKN1-204ENST00000585839 SUPT6HQ7KZ85 1726 aaKnown RBP25.29■■□□□ 1.64
PKN1-204ENST00000585839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.29■■□□□ 1.64
PKN1-204ENST00000585839 EHBP1L1Q8N3D4 1523 aa25.29■■□□□ 1.64
PKN1-204ENST00000585839 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
PKN1-204ENST00000585839 PLB1Q6P1J6 1458 aa25.27■■□□□ 1.64
PKN1-204ENST00000585839 ST20-MTHFSA0A0A6YYL1 179 aa25.27■■□□□ 1.64
PKN1-204ENST00000585839 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
PKN1-204ENST00000585839 CC2D1BQ5T0F9 858 aaKnown RBP25.24■■□□□ 1.63
PKN1-204ENST00000585839 NPM2Q86SE8 214 aaKnown RBP25.22■■□□□ 1.63
PKN1-204ENST00000585839 ABCC5O15440 1437 aa25.22■■□□□ 1.63
PKN1-204ENST00000585839 DAPK1P53355 1430 aa25.21■■□□□ 1.63
PKN1-204ENST00000585839 IQGAP2Q13576 1575 aa25.21■■□□□ 1.63
PKN1-204ENST00000585839 UGGT2Q9NYU1 1516 aa25.2■■□□□ 1.63
PKN1-204ENST00000585839 CCDC136Q96JN2 1154 aa25.19■■□□□ 1.62
PKN1-204ENST00000585839 USP47Q96K76 1375 aa25.17■■□□□ 1.62
PKN1-204ENST00000585839 ANKRD30BQ9BXX2 1392 aa25.17■■□□□ 1.62
PKN1-204ENST00000585839 CNTLNQ9NXG0 1405 aa25.17■■□□□ 1.62
PKN1-204ENST00000585839 NBR1Q14596 966 aa25.15■■□□□ 1.62
PKN1-204ENST00000585839 PPP4R2Q9NY27 417 aa25.15■■□□□ 1.62
PKN1-204ENST00000585839 ABCA5Q8WWZ7 1642 aa25.14■■□□□ 1.61
PKN1-204ENST00000585839 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.61
PKN1-204ENST00000585839 LRRIQ1Q96JM4 1722 aa25.12■■□□□ 1.61
PKN1-204ENST00000585839 HECW1Q76N89 1606 aa25.11■■□□□ 1.61
PKN1-204ENST00000585839 DENND4BO75064 1496 aaPredicted RBP25.1■■□□□ 1.61
PKN1-204ENST00000585839 NBPF1Q3BBV0 1214 aa25.1■■□□□ 1.61
PKN1-204ENST00000585839 ANKRD30AQ9BXX3 1397 aa25.1■■□□□ 1.61
PKN1-204ENST00000585839 SAMD9Q5K651 1589 aa25.09■■□□□ 1.61
PKN1-204ENST00000585839 AKNAQ7Z591 1439 aa25.08■■□□□ 1.61
PKN1-204ENST00000585839 MSH5O43196 834 aa25.08■■□□□ 1.6
PKN1-204ENST00000585839 NUP153P49790 1475 aaKnown RBP25.07■■□□□ 1.6
PKN1-204ENST00000585839 MIA2Q96PC5 1412 aa25.05■■□□□ 1.6
PKN1-204ENST00000585839 ANKRD50Q9ULJ7 1429 aa25.04■■□□□ 1.6
PKN1-204ENST00000585839 CHGAP10645 457 aaKnown RBP25.03■■□□□ 1.6
PKN1-204ENST00000585839 ROCK2O75116 1388 aaKnown RBP25.02■■□□□ 1.6
PKN1-204ENST00000585839 CARMIL2Q6F5E8 1435 aa25.01■■□□□ 1.59
PKN1-204ENST00000585839 KIAA0586Q9BVV6 1533 aa25■■□□□ 1.59
PKN1-204ENST00000585839 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
PKN1-204ENST00000585839 PLIN1O60240 522 aa24.99■■□□□ 1.59
PKN1-204ENST00000585839 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
PKN1-204ENST00000585839 TROQ12816 1431 aaPredicted RBP24.98■■□□□ 1.59
PKN1-204ENST00000585839 ZBED9Q6R2W3 1325 aa24.98■■□□□ 1.59
PKN1-204ENST00000585839 CAMSAP2Q08AD1 1489 aa24.97■■□□□ 1.59
PKN1-204ENST00000585839 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
PKN1-204ENST00000585839 NCOA1Q15788 1441 aa24.97■■□□□ 1.59
PKN1-204ENST00000585839 WDR62O43379 1518 aa24.97■■□□□ 1.59
PKN1-204ENST00000585839 DISP1Q96F81 1524 aa24.97■■□□□ 1.59
PKN1-204ENST00000585839 KIF15Q9NS87 1388 aa24.96■■□□□ 1.59
PKN1-204ENST00000585839 SKAP1Q86WV1 359 aa24.95■■□□□ 1.59
PKN1-204ENST00000585839 RPRD2Q5VT52 1461 aaKnown RBP24.95■■□□□ 1.58
PKN1-204ENST00000585839 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
PKN1-204ENST00000585839 KDM5BQ9UGL1 1544 aa24.94■■□□□ 1.58
PKN1-204ENST00000585839 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
PKN1-204ENST00000585839 CDCA7LQ96GN5 454 aa24.93■■□□□ 1.58
PKN1-204ENST00000585839 TCOF1Q13428 1488 aaKnown RBP24.92■■□□□ 1.58
PKN1-204ENST00000585839 PTPRGP23470 1445 aa24.92■■□□□ 1.58
PKN1-204ENST00000585839 NUDCQ9Y266 331 aa24.91■■□□□ 1.58
PKN1-204ENST00000585839 GPATCH8Q9UKJ3 1502 aaKnown RBP24.91■■□□□ 1.58
PKN1-204ENST00000585839 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
PKN1-204ENST00000585839 TNNT2P45379 298 aaPredicted RBP24.88■■□□□ 1.57
PKN1-204ENST00000585839 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
PKN1-204ENST00000585839 C9orf84Q5VXU9 1444 aa24.87■■□□□ 1.57
PKN1-204ENST00000585839 EXOC6Q8TAG9 804 aa24.87■■□□□ 1.57
PKN1-204ENST00000585839 PANK3Q9H999 370 aa24.87■■□□□ 1.57
PKN1-204ENST00000585839 ROCK1Q13464 1354 aa24.85■■□□□ 1.57
PKN1-204ENST00000585839 PNISRQ8TF01 805 aaKnown RBP24.85■■□□□ 1.57
PKN1-204ENST00000585839 PZPP20742 1482 aa24.83■■□□□ 1.57
PKN1-204ENST00000585839 AFAP1Q8N556 730 aa24.82■■□□□ 1.56
PKN1-204ENST00000585839 KIAA0556O60303 1618 aa24.82■■□□□ 1.56
PKN1-204ENST00000585839 KIF14Q15058 1648 aa24.82■■□□□ 1.56
PKN1-204ENST00000585839 TEX14Q8IWB6 1497 aa24.81■■□□□ 1.56
PKN1-204ENST00000585839 NUTM2DQ5VT03 806 aaPredicted RBP24.79■■□□□ 1.56
PKN1-204ENST00000585839 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
PKN1-204ENST00000585839 CCDC146Q8IYE0 955 aa24.78■■□□□ 1.56
PKN1-204ENST00000585839 NEUROD2Q15784 382 aa24.78■■□□□ 1.56
PKN1-204ENST00000585839 CCDC144AA2RUR9 1427 aa24.76■■□□□ 1.55
PKN1-204ENST00000585839 RCAN3Q9UKA8 241 aa24.76■■□□□ 1.55
PKN1-204ENST00000585839 PAK3O75914 559 aaPredicted RBP24.76■■□□□ 1.55
PKN1-204ENST00000585839 ANP32AP39687 249 aaKnown RBP24.76■■□□□ 1.55
PKN1-204ENST00000585839 ATP10BO94823 1461 aa24.74■■□□□ 1.55
PKN1-204ENST00000585839 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
PKN1-204ENST00000585839 MYBBP1AQ9BQG0 1328 aaKnown RBP24.73■■□□□ 1.55
PKN1-204ENST00000585839 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
PKN1-204ENST00000585839 LAS1LQ9Y4W2 734 aaKnown RBP24.73■■□□□ 1.55
PKN1-204ENST00000585839 WDR43Q15061 677 aaKnown RBP eCLIP24.72■■□□□ 1.55
PKN1-204ENST00000585839 KNSTRNQ9Y448 316 aa24.72■■□□□ 1.55
PKN1-204ENST00000585839 KTN1Q86UP2 1357 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms