RNA–Protein interactions for RNA: ENST00000585296.1

NCOR1-226, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-226ENST00000585296 HECW1Q76N89 1606 aa30.9■■■□□ 2.54
NCOR1-226ENST00000585296 PLEKHD1A6NEE1 506 aa30.89■■■□□ 2.54
NCOR1-226ENST00000585296 ARHGEF12Q9NZN5 1544 aa30.88■■■□□ 2.53
NCOR1-226ENST00000585296 STRCQ7RTU9 1775 aa30.88■■■□□ 2.53
NCOR1-226ENST00000585296 DMRT2Q9Y5R5 561 aa30.88■■■□□ 2.53
NCOR1-226ENST00000585296 ATP10AO60312 1499 aa30.78■■■□□ 2.52
NCOR1-226ENST00000585296 C9orf84Q5VXU9 1444 aa30.78■■■□□ 2.52
NCOR1-226ENST00000585296 SCAPERQ9BY12 1400 aa30.77■■■□□ 2.52
NCOR1-226ENST00000585296 UHRF1BP1Q6BDS2 1440 aa30.76■■■□□ 2.51
NCOR1-226ENST00000585296 CEBPAP49715 358 aaPredicted RBP30.76■■■□□ 2.51
NCOR1-226ENST00000585296 SETD1BQ9UPS6 1966 aaKnown RBP30.72■■■□□ 2.51
NCOR1-226ENST00000585296 PTPRTO14522 1441 aa30.71■■■□□ 2.51
NCOR1-226ENST00000585296 PLCH2O75038 1416 aa30.69■■■□□ 2.5
NCOR1-226ENST00000585296 IQSEC2Q5JU85 1478 aa30.65■■■□□ 2.5
NCOR1-226ENST00000585296 LTBP4Q8N2S1 1624 aa30.65■■■□□ 2.5
NCOR1-226ENST00000585296 RANGAP1P46060 587 aaPredicted RBP30.63■■■□□ 2.49
NCOR1-226ENST00000585296 CSRNP3Q8WYN3 585 aa30.62■■■□□ 2.49
NCOR1-226ENST00000585296 CDK13Q14004 1512 aaKnown RBP30.59■■■□□ 2.49
NCOR1-226ENST00000585296 MYO5CQ9NQX4 1742 aa30.57■■■□□ 2.48
NCOR1-226ENST00000585296 ZNF518AQ6AHZ1 1483 aa30.57■■■□□ 2.48
NCOR1-226ENST00000585296 C3P01024 1663 aa30.55■■■□□ 2.48
NCOR1-226ENST00000585296 EFCAB2Q5VUJ9 269 aa30.55■■■□□ 2.48
NCOR1-226ENST00000585296 KDM5CP41229 1560 aa30.54■■■□□ 2.48
NCOR1-226ENST00000585296 REREQ9P2R6 1566 aa30.52■■■□□ 2.48
NCOR1-226ENST00000585296 DIP2CQ9Y2E4 1556 aa30.5■■■□□ 2.47
NCOR1-226ENST00000585296 NCOA1Q15788 1441 aa30.49■■■□□ 2.47
NCOR1-226ENST00000585296 TRAPPC8Q9Y2L5 1435 aa30.47■■■□□ 2.47
NCOR1-226ENST00000585296 AFAP1Q8N556 730 aa30.44■■■□□ 2.46
NCOR1-226ENST00000585296 ABCA6Q8N139 1617 aa30.42■■■□□ 2.46
NCOR1-226ENST00000585296 MYT1LQ9UL68 1186 aa30.41■■■□□ 2.46
NCOR1-226ENST00000585296 AGLP35573 1532 aa30.41■■■□□ 2.46
NCOR1-226ENST00000585296 ARHGAP5Q13017 1502 aa30.41■■■□□ 2.46
NCOR1-226ENST00000585296 ESF1Q9H501 851 aaKnown RBP30.4■■■□□ 2.46
NCOR1-226ENST00000585296 KIF14Q15058 1648 aa30.4■■■□□ 2.46
NCOR1-226ENST00000585296 MLH3Q9UHC1 1453 aa30.38■■■□□ 2.45
NCOR1-226ENST00000585296 CAMSAP1Q5T5Y3 1602 aa30.36■■■□□ 2.45
NCOR1-226ENST00000585296 EEA1Q15075 1411 aa30.35■■■□□ 2.45
NCOR1-226ENST00000585296 CNTLNQ9NXG0 1405 aa30.34■■■□□ 2.45
NCOR1-226ENST00000585296 UBAP1LF5GYI3 381 aa30.33■■■□□ 2.45
NCOR1-226ENST00000585296 CDK11AQ9UQ88 783 aaPredicted RBP30.33■■■□□ 2.45
NCOR1-226ENST00000585296 ZNF335Q9H4Z2 1342 aaPredicted RBP30.29■■■□□ 2.44
NCOR1-226ENST00000585296 TROQ12816 1431 aaPredicted RBP30.29■■■□□ 2.44
NCOR1-226ENST00000585296 NPATQ14207 1427 aa30.28■■■□□ 2.44
NCOR1-226ENST00000585296 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
NCOR1-226ENST00000585296 FMN1Q68DA7 1419 aa30.27■■■□□ 2.44
NCOR1-226ENST00000585296 CDC42BPBQ9Y5S2 1711 aa30.26■■■□□ 2.43
NCOR1-226ENST00000585296 MROH2AA6NES4 1674 aa30.26■■■□□ 2.43
NCOR1-226ENST00000585296 CLIP1P30622 1438 aa30.24■■■□□ 2.43
NCOR1-226ENST00000585296 ABCC1P33527 1531 aa30.23■■■□□ 2.43
NCOR1-226ENST00000585296 NCKAP5LQ9HCH0 1330 aa30.22■■■□□ 2.43
NCOR1-226ENST00000585296 KIDINS220Q9ULH0 1771 aa30.21■■■□□ 2.43
NCOR1-226ENST00000585296 ITSN2Q9NZM3 1697 aa30.21■■■□□ 2.43
NCOR1-226ENST00000585296 PLA2R1Q13018 1463 aa30.19■■■□□ 2.42
NCOR1-226ENST00000585296 PREX2Q70Z35 1606 aa30.18■■■□□ 2.42
NCOR1-226ENST00000585296 MED1Q15648 1581 aaPredicted RBP30.18■■■□□ 2.42
NCOR1-226ENST00000585296 ZNF142P52746 1687 aaPredicted RBP30.17■■■□□ 2.42
NCOR1-226ENST00000585296 PKD2Q13563 968 aa30.16■■■□□ 2.42
NCOR1-226ENST00000585296 ZMYM3Q14202 1370 aa30.15■■■□□ 2.42
NCOR1-226ENST00000585296 MYO3AQ8NEV4 1616 aa30.14■■■□□ 2.42
NCOR1-226ENST00000585296 TCOF1Q13428 1488 aaKnown RBP30.14■■■□□ 2.42
NCOR1-226ENST00000585296 SUPT6HQ7KZ85 1726 aaKnown RBP30.13■■■□□ 2.41
NCOR1-226ENST00000585296 LRRIQ1Q96JM4 1722 aa30.1■■■□□ 2.41
NCOR1-226ENST00000585296 ARHGAP35Q9NRY4 1499 aa30.1■■■□□ 2.41
NCOR1-226ENST00000585296 CEP170BQ9Y4F5 1589 aaPredicted RBP30.1■■■□□ 2.41
NCOR1-226ENST00000585296 HSPA1LP34931 641 aa30.07■■■□□ 2.4
NCOR1-226ENST00000585296 CLTCQ00610 1675 aaKnown RBP30.05■■■□□ 2.4
NCOR1-226ENST00000585296 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
NCOR1-226ENST00000585296 SAMD9LQ8IVG5 1584 aa30.05■■■□□ 2.4
NCOR1-226ENST00000585296 SCAF1Q9H7N4 1312 aaKnown RBP30.02■■■□□ 2.4
NCOR1-226ENST00000585296 PTPRKQ15262 1439 aa30.02■■■□□ 2.4
NCOR1-226ENST00000585296 CDC42BPAQ5VT25 1732 aa30■■■□□ 2.39
NCOR1-226ENST00000585296 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
NCOR1-226ENST00000585296 PIP4K2BP78356 416 aa29.99■■■□□ 2.39
NCOR1-226ENST00000585296 TOM1O60784 492 aa29.98■■■□□ 2.39
NCOR1-226ENST00000585296 PLXNC1O60486 1568 aa29.96■■■□□ 2.39
NCOR1-226ENST00000585296 CPS1P31327 1500 aa29.96■■■□□ 2.39
NCOR1-226ENST00000585296 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
NCOR1-226ENST00000585296 SPAG9O60271 1321 aaKnown RBP29.94■■■□□ 2.38
NCOR1-226ENST00000585296 SYCP2Q9BX26 1530 aa29.93■■■□□ 2.38
NCOR1-226ENST00000585296 PHF23Q9BUL5 403 aaPredicted RBP29.92■■■□□ 2.38
NCOR1-226ENST00000585296 CCDC18Q5T9S5 1454 aa29.92■■■□□ 2.38
NCOR1-226ENST00000585296 ATP7AQ04656 1500 aa29.91■■■□□ 2.38
NCOR1-226ENST00000585296 A2ML1A8K2U0 1454 aa29.91■■■□□ 2.38
NCOR1-226ENST00000585296 DNMT1P26358 1616 aaKnown RBP29.9■■■□□ 2.38
NCOR1-226ENST00000585296 A2MP01023 1474 aa29.89■■■□□ 2.38
NCOR1-226ENST00000585296 POLR1AO95602 1720 aaPredicted RBP29.89■■■□□ 2.38
NCOR1-226ENST00000585296 INO80Q9ULG1 1556 aaPredicted RBP29.88■■■□□ 2.37
NCOR1-226ENST00000585296 SHANK2Q9UPX8 1470 aa29.87■■■□□ 2.37
NCOR1-226ENST00000585296 ZNF777Q9ULD5 760 aaPredicted RBP29.87■■■□□ 2.37
NCOR1-226ENST00000585296 EHMT2Q96KQ7 1210 aa29.86■■■□□ 2.37
NCOR1-226ENST00000585296 NEURL4Q96JN8 1562 aa29.86■■■□□ 2.37
NCOR1-226ENST00000585296 GGT6Q6P531 493 aa29.85■■■□□ 2.37
NCOR1-226ENST00000585296 CASKIN1Q8WXD9 1431 aa29.82■■■□□ 2.36
NCOR1-226ENST00000585296 HNRNPMP52272 730 aaKnown RBP eCLIP29.82■■■□□ 2.368e-8■■■■□ 25
NCOR1-226ENST00000585296 KIAA1107Q9UPP5 1409 aa29.79■■■□□ 2.36
NCOR1-226ENST00000585296 ALKQ9UM73 1620 aa29.79■■■□□ 2.36
NCOR1-226ENST00000585296 GPATCH8Q9UKJ3 1502 aaKnown RBP29.79■■■□□ 2.36
NCOR1-226ENST00000585296 ADGBQ8N7X0 1667 aa29.76■■■□□ 2.36
NCOR1-226ENST00000585296 PLEKHH2Q8IVE3 1493 aa29.76■■■□□ 2.35
NCOR1-226ENST00000585296 VWDEQ8N2E2 1590 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms